Dtro011489.1
Basic Information
- Insect
- Drosophila tropicalis
- Gene Symbol
- snpc-4
- Assembly
- GCA_018151085.1
- Location
- JAECWH010000829.1:8243594-8245254[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.8 8.5e+03 -3.0 0.1 23 46 197 222 196 222 0.58 2 5 2e-12 2.1e-09 37.4 0.0 1 39 228 267 228 274 0.92 3 5 9.5e-09 1e-05 25.6 0.1 3 44 297 342 296 344 0.88 4 5 2.6e-07 0.00028 21.0 0.0 2 46 351 396 350 396 0.88 5 5 6.5e-10 7e-07 29.3 0.0 3 43 404 445 402 448 0.95
Sequence Information
- Coding Sequence
- ATGTGCAATGTGGATAATCTGAAATGGAATCAGAACCAGTTGCTGCTAGAAATCACCTCCCTGTTACAGACCACATCCCAACCCAGCGATGTCAATGCCCTCGCTTTGAACCAAGAGATGCAACGTCGCCTGGAGCAGGTGAAGGCAAAGATTCACATCCTGCTGAAGTCGGTTAGAACTCGATATGCCCGTAATGAGGAGATTCTTGTGCGACGTCTTAAGCCACGCTCCAGACAGGATGAAGCTATCTGCCAATCTGGAGCTATACTGCGAGGCGGAACCTTTCGTTTTAAGGGAAACCTGTATTTCCGCGATGTGGATGGACGCAGTTGTCCCAACAATGAGGATTACGAACGACGCTGTGCTGACGAAATGTTTCCCACCGACTTCGACATGCGTTCCAAGCATGTGTGGACTATCTTGGACAAGAAGAATGTAGTAATGGGGGTCAAGCAGCAGTTGTTGGATTATACTATATATAAAAATCAGTTAAAGACACAGAATGTTTTAAAGCGCAAAGCAGTGGATCAACACACCAAATCGCTAGTCAGCCTGATGGCTGCTGTGGATGGGAACTTCAGTATTGATTGGAATCAAATCAGCACCATAGATGTGGTATATCGTCATTCATCCTATAGCTGCGAGGCTATGTGGCGGGTCTATTTGGATCCCAAAATTCGCCGTGATGATTGGACAGAAGAGGAAGACGAAGCCCTGGCAGAGGCAGCAAAATCGTATCAAATGCAGAATTGGCAAGCCATCGCCACATCTCTAGATGGGCGTTCAGATTATCAATGTTTTGTACGTGTCCAGACCACTTTGCGAAGCTCTGTGATTGCTGCTGCATCGTCATCATCATCGTCGCCCAACTTGACGAGTGGCGTCGTAAAATGGTCCGAAGAGGAAAATGAGAGATTAATAAGTATGGTTGAGAAGAATACTATGAATGGCCAGGTTAACTGGCAACGGGTAGTAGAACATTTTCCCGGTAAATCCAAATCGACAATCATCGGAAGATATACCTATGTTCTCCATCCGAGCATAAGCCATGACCCCTTCAGCCCAAGAGAGGACATGATGTTATTTGCTGCCGTTGAAGAGTACGGCGGTAAATTCCATTGCTTTCCCCGATCCTTGTTCCCGAATCGGTCTTTGGCCCAGTTACGGACACGTTATCACAATGTATTAGCTCAACGTGACAAAACCGACGCCTGGTCTGAATTAGATGATGCTAAGCTGATGGAATTTGTTACAGAGCACGGCGCCACGCAGTGGGTAAATTGCGCCGCGTTTCTGGGTAATCACACCAGAACCAGTTGTCGTACTCGCTATTTGGTGATTAAGCGCTTTCTAGAGAGGAATCCATCGGCAACAGTGCAGGATTTTCCAAGGCGCAAGAAAACTAAGAACAGTCAGATTACCTCTGAGAATTGGGCTCAACGTTTGCAGGAATGGCACGATAATCCTGATTCCCTGGCAGCTGCCGAAACCAAACCACCAAAGCCCAAGAAAATCCGAAGAAAAAAAGCCTAA
- Protein Sequence
- MCNVDNLKWNQNQLLLEITSLLQTTSQPSDVNALALNQEMQRRLEQVKAKIHILLKSVRTRYARNEEILVRRLKPRSRQDEAICQSGAILRGGTFRFKGNLYFRDVDGRSCPNNEDYERRCADEMFPTDFDMRSKHVWTILDKKNVVMGVKQQLLDYTIYKNQLKTQNVLKRKAVDQHTKSLVSLMAAVDGNFSIDWNQISTIDVVYRHSSYSCEAMWRVYLDPKIRRDDWTEEEDEALAEAAKSYQMQNWQAIATSLDGRSDYQCFVRVQTTLRSSVIAAASSSSSSPNLTSGVVKWSEEENERLISMVEKNTMNGQVNWQRVVEHFPGKSKSTIIGRYTYVLHPSISHDPFSPREDMMLFAAVEEYGGKFHCFPRSLFPNRSLAQLRTRYHNVLAQRDKTDAWSELDDAKLMEFVTEHGATQWVNCAAFLGNHTRTSCRTRYLVIKRFLERNPSATVQDFPRRKKTKNSQITSENWAQRLQEWHDNPDSLAAAETKPPKPKKIRRKKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -