Dtro002003.1
Basic Information
- Insect
- Drosophila tropicalis
- Gene Symbol
- fru
- Assembly
- GCA_018151085.1
- Location
- JAECWH010000574.1:10008641-10010834[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-12 1e-08 34.8 0.1 1 44 375 418 375 419 0.91 2 2 2.6 4.9e+03 -2.6 0.9 4 20 514 529 514 529 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGTGGCGGAGGCGGAGGTGCCACTCCCGTAGCAGCCAGCAGTGAGGGTGGCCAAACATATTGCCTTCGCTGGAATAATCATCAAACGAATTTGGTACAAATCCTTCATGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACTTTGGTTGTCGATGATGAACAGTTCAAGGCCCATCGTGTCGTGTTGGCCGCCAATTCGCCATATTTTCAACATATACTACAAGATGTTCCGCAGGATCATTGTAGCATTATATTGCCAGGTGTCAGGGGTTTCGAGATTGCTGCCCTTTTGCAATATATGTATACGGGTGAGACGACAGTGACCAAGAGTCAAGAGCCAGAAATTTTACGTACAGCCAAAGAGCTGCAGGTGAAAGGACTCTATGATAATTTGATGAAATTCAATAATAATAAGCCATCGAGTGCAGCAACATCGGCGGATGAGCGTGTCCATTATGGTCATGGCAATAGCATAGCTCCCACTTCGAGTTCCGTGCCGCCATTTCGAGCAGCTGCTCGCCCCCACCGCCAGCGTTTGGTGCCTACCAACAGCCCCCCGTATTCGAATTATGGTCCATCCGGAGCAAGTCACCCCTCCCATATTCCAGCCGGCGAGACTCCATTGACTCCCACACATGCCACTCCACATGCTGCAGCCGGTGAGGCTGGCCAATGGCCACTTTCTCCATCCGCTGCCGCTGCTGCCATGTTGAATTCTGTCTATGAGTCTGCTGCCGATATGAATCCTCTCAAGCGTAAGAAACTCTCGGCCATATCCAGTATGCTGCTCAATAGTACACGAGATACACCCATTTTGCGTAACGTTTTGGCCCAGGCTAATCCAGCGGATTCGTCACAACAACAACAGCAACCGAATCCATTGCTCCTGAAGAGTTCCTCATCATCCTCATTGGCAGAGAAGTCGACACCCCATCAGAGTGGTGGCGGCGTTGGCAACCTTGGAGGCGGTGGAGGCACTGGTAGCCATAGTTTCAATGGCTCCGATTATGGCGGTGATAAGGAACCTCTCTCTCCACACACAGATCGCTCATTCGACGAGGAGACGGGAGGTCCTGGTGGCAAGAAACCTGAATGGAAACGTTACAAGCAATATACCAGGGCCGACATGATGTGCGCCATTCAAGCTGTCCGTGAGGGCATGAGCGCTTTGCAGGCGAGTCGTAAATATGGACTACCTAGTCGAACACTCTATGATAAGGTGCGCAAGCTAAATATCACCACAGGCCGGGGAACACATCGCACTCCCAAGCGTAGTCCACCTGGAGTGGAATCTTCGGCTGCCTTCCCCTATTCCGCTGCGGCAGCAGCTGCTGCAGCCCACAATTATGGCCAGTCTGAGCTCCTGGAACGCAGTGAGCAGGTCAAGGATCATGGTTCTCATCATCCTCATCATGGCATGCCACCCACCATATCCCATTCGGCAGCTGCCCTCCTGGATCATGCATTCCTCCAGCAGGCCCTGGAGAATCGTGGCGGCGACATGGCCGGACGTGAAGCTCTCCATGCCATGGCTTTGGCTGCAGCTGCTCATGCAGCCGCCAATCGCATGTCCACTAGTCCCCCTGGTTCGGGTTCAAATGGTCATCCACATGGATCCGCAAGATCACGCAGTCCCAGCCCCAGTCCACAGCATTATGCTGAGGATCTGGAAATGCACGAGACCAAACACCACGAGCGTCTAATCAAACGTGAACGGGAACAGGACGAACGCGAAGACGTTGATGCTGACGATGAAGAGGATCAGGATCATGATCATGTTGAAGATTTATCATTGGCACGTAAAGAACGACCCGAATCACCATATTCCCCACCACCGCCACGGGCTTCATCGCCCCTGGAGGGAGCCAGTGTCATAATGCATCACTCATCGAATTCCACCTCAACCAATGGCAAAGAACACGAGGATTATCCCAATTCGGCTCAATCATCGCCACCGCCGCCGCCACCGCCATTGCCTCTCGGTTTGGGCCTTAAACGTGAGCTGTTGGGCAACGATGAAATGCAAACACGCACAGACTGA
- Protein Sequence
- MGGGGGGGATPVAASSEGGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQHILQDVPQDHCSIILPGVRGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNNNKPSSAATSADERVHYGHGNSIAPTSSSVPPFRAAARPHRQRLVPTNSPPYSNYGPSGASHPSHIPAGETPLTPTHATPHAAAGEAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQQQQQPNPLLLKSSSSSSLAEKSTPHQSGGGVGNLGGGGGTGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGPGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVESSAAFPYSAAAAAAAAHNYGQSELLERSEQVKDHGSHHPHHGMPPTISHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSTSPPGSGSNGHPHGSARSRSPSPSPQHYAEDLEMHETKHHERLIKREREQDEREDVDADDEEDQDHDHVEDLSLARKERPESPYSPPPPRASSPLEGASVIMHHSSNSTSTNGKEHEDYPNSAQSSPPPPPPPLPLGLGLKRELLGNDEMQTRTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00501130;
- 90% Identity
- iTF_00523619;
- 80% Identity
- iTF_00612159;