Dtro007064.1
Basic Information
- Insect
- Drosophila tropicalis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018151085.1
- Location
- JAECWH010000848.1:697089-707955[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-19 7.5e-16 57.6 0.0 1 43 220 263 220 265 0.95
Sequence Information
- Coding Sequence
- ATGTCTGAAACACCCGAGACTAGCTCCTCGTTGGATACCAATGAGACTGTCGAGGATTCCATACTGAAGATTCCGTCCTTTAAGATCAGCGGCCCAGCTAGTATCTCGCCAAGCATTCCCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACACGGGCAACTCGTTACTTTCGCCATCACCCACATCCATACAAAAGATGATGGCCAGCAATATCCAACGGCAAATCAATGAGGATGTGGCAACAAGCTTACGCAACGGCAATGCCGGCTCCAACGATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAAGCATATCGGTGGCCAAAATAATTGGAGGCACAGACACCTCACATTTTGGGGCTTCGCCGAATCTGCTGGCCCAGCATTCGCATCATTCCCATCTGCCTGCTCACCATGCCGCTGCCCATGCCCACCACCAGCAACAGCAGCAGCAGCAACTGAGTGCAGCGGAAGCCGCCGCATTGGCGGCTGGCAAGGGGACGCGGCCGAAACGTGGCAAATACAGGAACTATGATCGCGACAGCCTAGTGGAGGCAGTCAAGGCTGTGCAACGGGGTGAAATGTCGGTGCATCGGGCGGGCAGCTACTACGGTGTGCCGCACTCCACATTGGAGTACAAAGTCAAAGAGCGGCACTTGATGAGGCCGCGCAAACGAGAGCCCAAACCGCAACCGGATCTGGACGGTCTGACCGGAAGGGCGGGGGCCAGCAAACTGAGTGCACTCAGTCAGCTGGAGAAGCTTAAAGCGGGAACCAACAGCTCCAGTCAGGCCAATTCCAAGCTGAGCAATGCCCTCAAGAACAACAACCAGGCAGCGGCGGCGGCGGCAGCAGTTGCGGCCGCAGCAGCAGCACCCAATGGTCTCAAGTTGCCACTGTTCGATGGCGGTGCGCCGTTGTCCTTCCAGCCGAATATGTTCTGGACCCAGCCGAATGCAGCTGCCAACTATGGCCTGGATTTCAATCGCATGGCCAGCGCTGCTGCTGCTGCCGCCAATGCCAATCATCATGGCCATGGCGGAGTGCCGCCGATAAAGAGCGCCTTGGAGCTTGCCGAGAATATGTACGATGGCATTATACGTCAGACCCTGCAGAATGATGCCAAGAATCAAGGCAATGGCCATGGGCATAGCAATGCCCTGCTCGATCAGCTTTTGGTGAAGAAGACTCCCCTGCCGTTTACCAATAATCGTAGCAATGATTATGCCTCCATCTGCCCGCCAGTCAGTACCGAGAGCATTAAACGCTCGGCCAGTCCATTGGGCTCATATGCGGATATTAAGCGGGAGCGTCTTAGTGGTGAAAGTGGCAGTAGTAGCGATGAGGAACTAAATGATCATCATTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACGCAGCCGAATGACCTCAAGGGACTCGGAAACGGATACTCAAACTCTTGACAATGTGTTTTGGCTTCAATTGATGTCTTCGAATCTTTGTGCTCTCCATAATCTTGGTAACATGATTCAAACTAATAGACAGGCAACAATTAACCAATTGGCTGAAGAAGAGAAGAACGAATAA
- Protein Sequence
- MSETPETSSSLDTNETVEDSILKIPSFKISGPASISPSIPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYTGNSLLSPSPTSIQKMMASNIQRQINEDVATSLRNGNAGSNDXXXXXXXXXXXXXXXXXXXXPSISVAKIIGGTDTSHFGASPNLLAQHSHHSHLPAHHAAAHAHHQQQQQQQLSAAEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLDGLTGRAGASKLSALSQLEKLKAGTNSSSQANSKLSNALKNNNQAAAAAAAVAAAAAAPNGLKLPLFDGGAPLSFQPNMFWTQPNAAANYGLDFNRMASAAAAAANANHHGHGGVPPIKSALELAENMYDGIIRQTLQNDAKNQGNGHGHSNALLDQLLVKKTPLPFTNNRSNDYASICPPVSTESIKRSASPLGSYADIKRERLSGESGSSSDEELNDHHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSRMTSRDSETDTQTLDNVFWLQLMSSNLCALHNLGNMIQTNRQATINQLAEEEKNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -