Dtro006018.1
Basic Information
- Insect
- Drosophila tropicalis
- Gene Symbol
- kn
- Assembly
- GCA_018151085.1
- Location
- JAECWH010000555.1:1008462-1033019[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-233 2.4e-229 762.5 0.0 41 385 88 461 78 464 0.98 2 2 1.6e-07 0.003 16.0 16.5 422 518 464 560 460 582 0.60
Sequence Information
- Coding Sequence
- ATGTTCACGCCGAGAAGAAGTGCGCGTGTGGCCGAAATCGAAAGTGCGTCCTCGACGACATTTGCCAAAATGACAGCGGGTTTTGTTCATTCAGCGACGGCAAATCATCATCATCACAATCAGCACAGCCAGCACATTGTTGGCAATCATCAGCAACACTTGCAACAGCAACATCAGTCACAACAACAACAAGAACACCAACGACAACATCAAGAAGATATTCAAATCGAAAGCAATTCAAACAATAAAATTATGCGCTGTGAGACGAGCTTGGGCATTGGTCGAGCACATTTCGAGAAGCAGCCGCCAAGTAATCTACGTAAATCGAATTTCTTTCACTTTGTGATTGCTCTCTATGATCGTGCCGGACAGCCCATAGAGATTGAACGCACAGCATTCATTGGATTCATTGAGAAGGACTCGGAGTCGGATTCCACAAAGACAAACAATGGCATTCAATATCGACTGCAGTTACTCTATGCGAATGGTGCCCGACAGGAACAGGATATATTTGTTCGTCTCATCGATTCGGTGACAAAACAAGCCATTATCTATGAGGGTCAGGATAAGAATCCGGAAATGTGTCGGGTACTTCTGACGCACGAAGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACACCATCGGACCCCGTCATTATTGATCGGTTTTTCCTTAAATTCTTTTTAAAGTGCAATCAAAATTGCCTGAAGAATGCCGGCAATCCACGGGACATGCGAAGATTTCAGGTTGTCATTTCCACTCAAGTGGCTGTGGATGGGCCATTGCTGGCGATCTCGGACAACATGTTCGTTCACAACAATTCGAAGCATGGGAGACGTGCCAAGCGACTGGATACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCACCTTTGCCCGTGGCCACGCCCTGTATTAAGGCGATCTCACCCAGCGAGGGTTGGACAACGGGCGGAGCCACTGTCATAATTGTCGGGGACAATTTCTTCGATGGCCTTCAAGTGGTTTTTGGCACCATGCTGGTGTGGAGTGAGCTGATCACCTCGCATGCCATCCGAGTCCAGACCCCGCCAAGGCATATACCCGGTGTTGTGGAGGTGACGCTCTCCTATAAGAGCAAGCAGTTCTGCAAGGGGTCGCCCGGACGCTTTGTCTATGTCTCAGCACTCAATGAACCCACCATTGACTACGGTTTCCAGCGCCTGCAGAAGCTTATACCGCGCCATCCCGGCGACCCGGAGAAACTGCAAAAGGAGATTATCCTTAAGCGCGCCGCCGATCTGGTCGAGGCTCTCTATTCAATGCCCCGCTCACCAGGTGGCTCCACCGGCTTCAATTCATATGCTGGTCAGCTGGCAGTCAGTGTCCAAGACGGATCGGGCCAATGGACCGAGGATGACTATCAGCGCGCCCAGTCAAGCAGTGTGAGTCCACGAGGCGGCTACTGCAGCAGCGCCTCCACGCCGCACAGTTCGGGTGGCTCGTATGGCGCCTCGGCTGCCACTGCAGCGGTGTCGGCCTCAGCTAATGGTTATGCTCCCGCACCCAACATGGGCACACTGTCCTCCTCTCCGGGCAGTGTATTCAACTCCACGTCAATGTCCGTGTCGTCGACCTGGCATCAGGCGTTTGTGCAACATCATCAGGCGGCTGCCGTTGCTGCCACCCATCCGCATCACTATCCGCATCCACACCAGCCATGGCACAATCCAGCCACGGCATCAGCTACTGCGGCGGCCGTTTAA
- Protein Sequence
- MFTPRRSARVAEIESASSTTFAKMTAGFVHSATANHHHHNQHSQHIVGNHQQHLQQQHQSQQQQEHQRQHQEDIQIESNSNNKIMRCETSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASAATAAVSASANGYAPAPNMGTLSSSPGSVFNSTSMSVSSTWHQAFVQHHQAAAVAATHPHHYPHPHQPWHNPATASATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -