Basic Information

Insect: Drosophila tropicalis
Gene Symbol: JARID2
Assembly: GCA_018151085.1
Location: JAECWH010000446.1:1924155-1932773[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.4e-08 2.7e-05 24.5 0.0 6 48 1990 2032 1985 2034 0.91

2 2 0.039 73 3.9 0.1 74 89 2035 2050 2031 2050 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.4e-08	2.7e-05	24.5	0.0	6	48	1990	2032	1985	2034	0.91
2	2	0.039	73	3.9	0.1	74	89	2035	2050	2031	2050	0.86

Sequence Information

Coding Sequence: ATGGTTGTCTCAAAAGACAACAAGCGTCGCCGCAAGGAAACAGAGACTCCACCGCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCATCACCCGAAATGCCCAAGAGAACCAAGGTGCAGGCTCAAAGGAAATTCGCCCAAGGCCAAAGTGCACCAAGTAGCAGTTCATCCAGTGCCGCCGCCGCAGCAGCTGCTGCTTCTTTGGCAAATGCTGGAGGAGGTCCAAGCACCTCATCGGGTGGTGGTGGTGGTGCAGGTGGTGCCGGCGGAGCTGGTGCCGATCAAAATCAACAGCCGCCTATTGAGATTTTACCCAACAAATGTCCCAAGCCGCAGGATTTTCTAACATTTCTATGTTTTCGTAATACCCCAGCATTGCCGGCCCATTTGGATTATCTTAATCAGGGCAAATCCAAGGAATCGGAAGCGGCCAGCAGCAATAATAACAATAATAATAACAATAAAAAAGGCAATCGTGGTGGGGGCGCAGGAGCCAGAGGAGGAGGTGGAAATGCTAAAAAGAAAAGGGGCAGACCAGCCAAGGGCCAAGCGGCAAAAGGCCAAGAGTTGCGATCAACACAAGGCGCTGCTGCAATAATGCTGCTCCACTACCAAAGCCACCTGGAGCTGCTGCAGCTGCCATCCTACCAGGAGCTGTTCGCAAGCGGGCCGAAGTTGTCGCAGAGGGCAATAGAAGGGGGTGGAGCGCGGGGCAGAGGAGCGGCTGGATTAGGGGCCAGAGCTACAGACACAAAGTGCAATACAGATGCCAAGCGTCGCTCGAACCGATCTATAGTCAAAGACAGCAAACCTCTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACTTCTCCGCACACGATGCCTCTTCCCGTAATGGTATTGAGACGGCGGTGCCTCCCGAACATGTGGAAGCGAAATCAGAGCCCCCGGCCAAACGTGGACGTCCGGCAGTAGTCAAAAAAGTTACCAACGTTGAAACAGCTGCAATTAGCGAAAAGTCGGCAGCGCCCGTCAAGCGATTACGTCAAAAGGAATCACCCATATTTATACCATCACCGGAGTCTTCTGGCCGTATGACACGTCAGAGGGCTTTCTTTGAGCCCGTCAAAGTATTGCCAGTTCAGGAAAACGAAAAGGACAGGGAAAGGGAGAAGGAAAAGCAAAAGGAGGATAAAGTCAAGTTACAGAACGAGTTGGAAAAGAAAAACGAGAAGGAGGAGAAAAAGTTGGTGAAAGATCTCGAACCGATTAAGGCGGCGGAACCCAAGGAGAAAACAAATTCCAGTATTTATGCCAAAGATGCCCACAAGCAGCGCCTAGAAAATGGTAGTGGTGGTGGCGCGACTAGTCCAGCCACAGCTACAGGTGGTGGTGGTGGCAGCTCCTCATCTGGCAAGGGTAAAAAGAGTTTAAACGTTTTCGATTTTAGTTCCGATGATGAGCAACCGCTGGCCAAAACGATTAAACTGAAAAAAGGCGGTAAGGCCAGTCCGAAGAAATCCCCAGGAGCAGCTGCAGCAGCTGTTCGCGGACGAAAAACGGCCGGAGCAGCAGCTAAGAAGCAACAGCAACTGCAGCAGCATGAAAAAGCCGAAAAGACAAAGGATAAGGAAAAGGAGGACGAACCAAAGTTAAAGCTGGGGAAAAACAAAGCAGATGATGACTCACCCATCGCTCCGCAAGGATTAAAGAAACCATTAACTCAATTGGATAAGCCCCAGGCACGCCAACAGCGTGGCAATAAACAAACTAAAGCCATTAAATCCCTTCCGGAAACAGAAGAGATACCGACGCCGCCACAAAGGACTCCACGTCCTTCGCGTAAGACCAAAGAGGCGGCTGCCATATATATGGGCATCATTGGCCATAAACTTCAATTGGCCGATGATGAGGAAGATGATCTTTCGTTGAGTAGTTTTCCTGATATACCCAATGTCAAGGAAATGGAGAAAATGGAGAATGAAATTAAGAAGAATGCAGCGGGAAAGGCTTCACCAGCGCCGCCGCAGCAACCTCTGACTTCAGCCTCCAGCGCTTCTAAAGGCGTCGAAGTGACATCAGCTAAAACAGAAGCTCAAGCCGAGGTGGAAAAACCATCAGCAGCAAGCACACCCACGCCAACTCCTACAGCACCAGTCACTGCTGCTGCTCCAGCACGAAGAGGACGACCGCCCAAACAGGGCAAAGGAACGGGAGCAACAGCGACAGCGGGAGCCTCAACTGCTCCTCCTCAAATTGAGGGAATGCTGGTAAAAAAGGGTTCTTTGGCCAAAGTGAGCAGTGGCAGCGAACAAACGACAACAGGAAAAGGAGCCCAAACCAAAGCCAAGTCCGAACAGTCAAAGAATGTCGATTCCGATGAGGAGGAAGATTTTCTTATCAATGAGGAACTGAATGAAACCAAGCGTAAGCTGGAAAAGAGTTTCAGTGACTCGGATGATGAGCCCTTGGCCATTAAAGTGCCTGCCGCTAGTCACGGTGCCGGCAGCAGCAGCATGCTTAGGGCTAGCAACAAGGATACTTCAACAAATCCACCATCATCACCAGCTATAGTATCTGCTGCTCCACCACAAACAACAGGCAAATTAAAGAGCCCATCACCTGTCAAACCAGCAGCAGGATTAGCAACGGGAGCAGGAGTGGGAACAACTGTTTCACCGCTACCAACTGCAAACACCACCTCCAGCCAATTGACCATGTTGCCATTGACCAACAAATCAGCAGCATCAAGTACTCTGGGAGCCTTACCCATGCCAACGCCCAATGCGGGCAATGTGACAATATCACCGCCTACATTTTCGGCGCCAGGCGGAAGTCTCAAACCCATGGAAAAGAAGTCACCGGTACCCACGTCAAAGATTCTCAATGTGCCCGCCACTTACGCTCTGCCTGGGCAGAAGACTTCGTCATATTTGCCTCAAGCATCGCCACATTATCACTCCACCGGCTATGTACGTCCCCCGCCGACGCCTACTCATCAATTTGGCGGAGGAGCTGGTGTTGCTCCAGGTAGCAAGACACCATCACAGGCGGCGGCAACATCACCGCTTAAATATCAAACGCCTCCAACAACATATCCACCACCCATTGAGGCCTACCAGTGTCCAAAAATAAATCCCAATTTTTTGACACCCAAATACGAGAGAGGCCCACTGCCTCCCAGATCAGCTCCCGCAGCGACTAACTTTCCTACGCCGGCGCCGGTCAAATTTATGCCCACACCAGCCACAGCGACCACCACAGTATGTGGAACTACTAGCCAAGCAGGAGCAGCGAATAGCAATCCAACAATACAGTCCAACGCCAGCAACACCAATTTCAATAAAAGTGTCCAGCCCGCCTCTCCGCCTGTGGTTGTCCAGCCCCAACTAGTTCAGGCCCAATCGATGAGTCTCAATCTCAGTTTACCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTTTAAAAGATGAGATAGGCAGCATATTGGCTCAAGCAAATCTGATGCCCAGTAAAGAGGAATCGGGAAAAATCTTTGGCATAGCCAGTGTCAGTCTCGCACAGAGTTCCGGGCCGGATAACACAAAATGCACTTTGGGTAAATGCGGTTCCATACATAAGCCAGTCCTTGGTCCTGTTGTGCCCACTGAGGGCTATTTCGGTGATCAGCTGTCGAGCAAAGAGCGACGCAAGGCCAAAGTAAATATGACTCATGAGCAGATCCAGAAATGGTTGATCGAATGCTCATCGAACCCCGATGAGATTCAAGATGATCTCGATGATGATTTCGATGATAGCCTACGGCCACAACAGTCCACAACGCCGCCAGCTTCGAATGCTAGAGATGAGAAGGATGCGAGCACATTGAGTTTTAGTTCCTCGTCAAAGAATACCAGGGGAGATTTGGGTAAGAGTGACAGTGCCTGGTCGGCCAAGGGGCCATCGCTTAAGGCCACACCGGTGATGGTTATACCACTCACACGAAAAGATCAGCAGCAGCAACAGTTGCCGGCTGTAGTGGAGGAGAGCAAAGACACCGATGGCTTGGAATCAACGCCAGTTAATCTTACCCAGAAGCCGACAACAACGACGGCTGCCGCCGAAACAGAAAAAACAAGCAAACAGGCAACAGCTAATGAAAAGAAAACAAAAGAGTTAACGAAATCCTCTAAAGCAGCAGCACATACTTCACAGAAGAGTCCTACTCCGACACCGACACCCACAGCAACACCTCCACCACCCCAGCCACCTGCGCCAACGGCAACAACAACAACAGCCTCAGGGAAACAAAAACCCGAGAAGGGCAAGAAAACGCCAGCAGCATCTTCTTCATCAACGGCAACAACGCCGACCAAGCGCACTCCGGTTTACAATCAAAAGGGTAACAGGGCCAATCAGCAACAGCAGCAGGCACAGCAGCAACAACAACAACAATCCCATCAAGCGGAAAGTAAGACTACTAATAATCCAACTCAGAAACGTGGCACTGATTCCTCCATCTACGCCTTTGGCAAGGAAGAAGAATCTTCGACAAGCAAGCCAACAAATCGACGACGGTTAGAAGCGCCCACACCACCTCCGCCACTTGCTGCTCCGGCAACGACAAATTCCTCTGCCACAGTGCCCAATGCCTTAAGTGAACGTTCGCCCACTAAGAAGCGAGCGGCAGCAGCAGCCGCTGCCACAGCTGTCCAATTGACATTAAGTCCCACAGAGAATTGTAAGATTGAAGGAGCAGTCAAAACTAAAGCAGCCACGGGAAGAGGCACCAAGAAGCAGCAACAGCAGCAGCAGAAGGAACAGCAAAAACAACAACTGGAACAACAGCAACAAGTTGCCAACAGTGGCGGAGACTCAGACAATGAGGGAGCCACCTTCTATATACCCTTACAGGGTGCTGGAGTTGGTGGAACAGGTGATCCAACTGGTATACAAGGCGTTGCCGTTAAACTGGGACGCGAAGGTCCCGATGGACCCAATCAAAAAGTTGTTATGCAAGCGACTCTTGTCACCAAAGCACAAATGGATACCAATTCCAAGCCCCTGCCCGAATCCCTCAATACCAATGAATTGGTCAAGACATTGCTGCATGCGGCCAGCAGTAATAACGATGCCGCATCTTCGGCAGCCAGCATTAAAAGTTTACCGAAGGCTAGCACGTCAGCGGCGGCTGCAGCAGCTGCTGCTGCTGCATCAGGATCAGCCACAGCAACGGGAACAGGTACAACCGGCACCGGTACAAGTCTTGTACGTGTCAATTCGAATTCCTCACTCTTTTCGGGATCTGTCAAGTCTCGGACTGCGGCCCAGACTAGCTCCACAGCGGCGGCTATAGCCAAAAAGTACAAAGATGATACACCTATCAAGATGGCCAATAATACAGCCTTTCCAAGACACGATGATCCCACACAGATGGTCGAAGCGCCAATATTCCGGCCCAGTGAAAAGGAATTCGCCGATCCCATAGAGTTCATTGAGAGGATTACACCGCTGGCAGCGAGATTTGGCATTTGCAAGATTATACCGCCGGCAAGTTTCAAACCGGAATGCCGCATTTCGGATGAGATGCGTTTCACGGCCTACAATCAGTATGTACATAAAATGCTTCATCGTTGGGGCCCTAGTGCCAAGGAGCTGAGTGCCATTAAGAAATATCTGACCACCCAGAGTATTGTTATGAATCATCCACCATGGATCGGTGGCATGGAAGTCGATCTGCCGAGGCTCTATCACACCGTCCAGGAGTTGGGCGGCCTCAAGGAGGATCGGGTGACCAAATTGGATGATATCTACTGCAAGTACCTGTTACCCTATGACACTCTGTCGCCAGCCGAGAGGCAGAAGCTCTTCGATGAGGTGGAAGCCGATTGGGCCAAGCGAGAGGCCCGCGCCCGACGCAATGCCGATCGTTTTGTCAACACGGAGAGTGTATCGAATGAGGAGGACGATGTCAGCAGCGATGAGGATGAAGAATCCGAGGAGGAAATCGATGGCGTCTCAATGGAATGCATTGTCAAGGGTCGCAGCATGCCGCTAAGTCAATTCTATAGGATAGCCAGAAATACGATGGCCTTGTGGTTCAAGAGCACCGATCCGACTGTCAATGAAGTTGAAGCCGAATTTTGGCGTCATGTCGCTGTACGGGATAGTCATGTGTGCGTCCATTCGGGATCGATTGATAGCTCTGGTTGGGGTTATGGTTTTCCCAGTCCGGGACCCAAGGGAAAAGGTTCCAATTATGCGCGTCATCCATGGAATTTGAAGGTTTTAACCAATAACGCTGGCTCCGTATTGCGTTCGCTGGGTCCTGTTATGGGTGTCACAGTGCCCACTCTCCATGTGGGCATGCTATTCTCCGCCTGCTGTTGGTATCGCGATCCGCATGGTCTGTCATGGATCGAATATTTGCATACCGGAGCCTCGAAACTCTGGTACGGCATACCCGATGATCAAAGCGCCAATTTTAGGGCGGCGCTAACCTCACTGATACCCACACACTGTCAGAATAAAACCATTTGGTTGCCCTGTGATACGGTTATGGTTCCACCGCATATGCTCACCGATCGTGGTGTCTCTCTGTGTCGCATTGAACAAAAACCAGGTGAATTTATTGTAGTCTTTCCCCGAGCCTACACATCAAGTTTGGCCACTGGCTATGTGGTGTCGGAAAGTGTCTATTTTGCCACCATGTCTTGGCTGGATTTGGCTAAAGATGATTTTAGGGATATCCATGAGAGTTGTGAGCCAGCCATGTTCTCCCTGGAACAATTACTTTTCGCCTTGGGCTATGATCAACGTGTCAATTCGGAGGCACTGCAGCAAATGTTGCCCATGCTCAATGAAGTATGCGAAAAGGAATCTGCTGCACGTGAACAATTAAGGGCCGCTGGTGTGACATCCACCGAAAAAGTGCAAGCGGAAAAGGGACAAAAGGCAAGCAAAAAACAACAACAGCCACCACACAAATCAATCGAAAGCGAATGCGATCTTTGTCGAGCTAATCTCTATATCTCTATGGTCCGGACAGAGGAGGGAAATGTCTATTGTCTGCAACACGCCCTTAAAAATCTGAATAATGGCAATATACAGGCCAAACAATGTAAACTTATTTATGCCTACAATTTGGATGATATACAACAATTGATACGCCATTTGCAAGAGAAGATTCATCACAAGGCGGTGGTTAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETETPPPXXXXXXXXXXXXXXXXXXXXXXXSSPEMPKRTKVQAQRKFAQGQSAPSSSSSSAAAAAAAASLANAGGGPSTSSGGGGGAGGAGGAGADQNQQPPIEILPNKCPKPQDFLTFLCFRNTPALPAHLDYLNQGKSKESEAASSNNNNNNNNKKGNRGGGAGARGGGGNAKKKRGRPAKGQAAKGQELRSTQGAAAIMLLHYQSHLELLQLPSYQELFASGPKLSQRAIEGGGARGRGAAGLGARATDTKCNTDAKRRSNRSIVKDSKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFSAHDASSRNGIETAVPPEHVEAKSEPPAKRGRPAVVKKVTNVETAAISEKSAAPVKRLRQKESPIFIPSPESSGRMTRQRAFFEPVKVLPVQENEKDREREKEKQKEDKVKLQNELEKKNEKEEKKLVKDLEPIKAAEPKEKTNSSIYAKDAHKQRLENGSGGGATSPATATGGGGGSSSSGKGKKSLNVFDFSSDDEQPLAKTIKLKKGGKASPKKSPGAAAAAVRGRKTAGAAAKKQQQLQQHEKAEKTKDKEKEDEPKLKLGKNKADDDSPIAPQGLKKPLTQLDKPQARQQRGNKQTKAIKSLPETEEIPTPPQRTPRPSRKTKEAAAIYMGIIGHKLQLADDEEDDLSLSSFPDIPNVKEMEKMENEIKKNAAGKASPAPPQQPLTSASSASKGVEVTSAKTEAQAEVEKPSAASTPTPTPTAPVTAAAPARRGRPPKQGKGTGATATAGASTAPPQIEGMLVKKGSLAKVSSGSEQTTTGKGAQTKAKSEQSKNVDSDEEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPAASHGAGSSSMLRASNKDTSTNPPSSPAIVSAAPPQTTGKLKSPSPVKPAAGLATGAGVGTTVSPLPTANTTSSQLTMLPLTNKSAASSTLGALPMPTPNAGNVTISPPTFSAPGGSLKPMEKKSPVPTSKILNVPATYALPGQKTSSYLPQASPHYHSTGYVRPPPTPTHQFGGGAGVAPGSKTPSQAAATSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERGPLPPRSAPAATNFPTPAPVKFMPTPATATTTVCGTTSQAGAANSNPTIQSNASNTNFNKSVQPASPPVVVQPQLVQAQSMSLNLSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLKDEIGSILAQANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDSLRPQQSTTPPASNARDEKDASTLSFSSSSKNTRGDLGKSDSAWSAKGPSLKATPVMVIPLTRKDQQQQQLPAVVEESKDTDGLESTPVNLTQKPTTTTAAAETEKTSKQATANEKKTKELTKSSKAAAHTSQKSPTPTPTPTATPPPPQPPAPTATTTTASGKQKPEKGKKTPAASSSSTATTPTKRTPVYNQKGNRANQQQQQAQQQQQQQSHQAESKTTNNPTQKRGTDSSIYAFGKEEESSTSKPTNRRRLEAPTPPPPLAAPATTNSSATVPNALSERSPTKKRAAAAAAATAVQLTLSPTENCKIEGAVKTKAATGRGTKKQQQQQQKEQQKQQLEQQQQVANSGGDSDNEGATFYIPLQGAGVGGTGDPTGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPESLNTNELVKTLLHAASSNNDAASSAASIKSLPKASTSAAAAAAAAAASGSATATGTGTTGTGTSLVRVNSNSSLFSGSVKSRTAAQTSSTAAAIAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPSEKEFADPIEFIERITPLAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLTTQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALQQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKASKKQQQPPHKSIESECDLCRANLYISMVRTEEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNLDDIQQLIRHLQEKIHHKAVVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00503039;
90% Identity: -
80% Identity: -