Basic Information

Insect: Drosophila tristis
Gene Symbol: -
Assembly: GCA_018150885.1
Location: JAECWT010000117.1:4539108-4548208[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00019 0.013 15.7 3.4 1 23 283 305 283 305 0.98

2 11 0.00099 0.066 13.5 10.4 1 23 311 333 311 333 0.96

3 11 9.4e-05 0.0063 16.7 6.5 1 23 339 361 339 361 0.98

4 11 0.00043 0.028 14.6 1.6 1 23 367 389 367 389 0.95

5 11 2e-05 0.0014 18.8 0.5 1 23 395 417 395 417 0.97

6 11 1.4e-05 0.0009 19.3 0.1 1 23 423 445 423 445 0.98

7 11 0.00011 0.0077 16.4 2.0 1 23 450 473 450 473 0.97

8 11 0.048 3.2 8.2 0.3 1 23 479 502 479 502 0.94

9 11 0.00015 0.01 16.0 0.1 1 23 561 583 561 583 0.98

10 11 0.014 0.93 9.8 2.7 1 23 699 721 699 721 0.95

11 11 0.0041 0.27 11.5 4.9 5 23 734 752 726 752 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00019	0.013	15.7	3.4	1	23	283	305	283	305	0.98
2	11	0.00099	0.066	13.5	10.4	1	23	311	333	311	333	0.96
3	11	9.4e-05	0.0063	16.7	6.5	1	23	339	361	339	361	0.98
4	11	0.00043	0.028	14.6	1.6	1	23	367	389	367	389	0.95
5	11	2e-05	0.0014	18.8	0.5	1	23	395	417	395	417	0.97
6	11	1.4e-05	0.0009	19.3	0.1	1	23	423	445	423	445	0.98
7	11	0.00011	0.0077	16.4	2.0	1	23	450	473	450	473	0.97
8	11	0.048	3.2	8.2	0.3	1	23	479	502	479	502	0.94
9	11	0.00015	0.01	16.0	0.1	1	23	561	583	561	583	0.98
10	11	0.014	0.93	9.8	2.7	1	23	699	721	699	721	0.95
11	11	0.0041	0.27	11.5	4.9	5	23	734	752	726	752	0.92

Sequence Information

Coding Sequence: ATGTGCGCCGCCCAGAACCCACAGCCGCCCTTTGGCTACACCTGGGGCTTCGCAGACAACGGCAGCCGTACCGCCGAATCGGTTCTGGAGATATCGCCCAACATAAACTACACCGTCAGTGGGGAATCGATGCCCTATCTGCTGTCCACGGATGGATCATTGGCCGTACAAAAGGATGTCAAAGGTGCTCTCAGCGGCAATAAGGGGAATGTTGTGCGTCGCATGTACGTTGTGAACGATCCTTCGTTTCCGCCCGGTACACAGAGAGTAATAACCACTGGGGGCGGCTCGTCGGTAGTCAAGAAACAGGATTCGCAGCAGCAGGTGCTGAGCCTGGACAAGAACTATCTCCTGGTCGATCAGGCAACTGCAGCAGCAGCTGCAGCCGCGGCGGCCGGTGATCCCTCGGTTGCCCACCACCACACATTGACCAACGGTAGTATTGTTGATGCCAAGACCGGACAGACGGTGCTGACGGCGGGCTCAGCGGCGGCCAAGTCGCACTTTGGGTCGATCGGGGCGCTGCACCTCACCCAAGAGGAGTGCAACGAGATCCTTATTAAGCGCGCCATCGCTGCCGGCCACCATCAGACGCACACAATCACCGCTGCCGACGGATCGCATCATCATAGCTCGGCGTCTGGCGCGACACCAAGTGACATACTTCCTGGTATTTCAGTTCAAGTCCAGAAAGTAATACAAGGACTCGAAGAGAACGAGGACTCGCAGGGCGACGCACCCAACTTAAAGTTGGAGCCAGGCACATTAGAGTTGTCCCCAAAGACCGAACTACAGGAATCAATGCATTTCAGCGAAACGGACGCCACCATCAAGAAGGAACGCCCGTACAGTTGCGACGAGTGCGGCAAGTCCTTTCTGCTCAAGCATCATTTGACAACACACGCACGCGTGCACACAGGTGAGCGACCCCATATCTGTTCCCATTGCGGCAAGAGCTTTGCGCACAAACACTGTCTGAACACGCATCTACTGCTGCACTCAACCGACCGACCCTACCAGTGCCAGGAGTGCAAGAAGAGCTTCACCCTCAAGCATCATCTGCTGACGCACTCGCGCGTCCACAGCCGCGAGCGACCCTTCGTGTGCCAGGAGTGCGGACGTGCCTTCCCGCTTAAGCGGCACCTGGTCACGCACAGCAAATTCCACGCCGGCGAACGTCCATACGTCTGCGAGGAATGCGGTGAGAGCTTTGCCCAGGAAAACCATCTTATTATGCACTCGCGCTTCCATGGTTCATTGAATCCATTTGTTTGCGCTGACTGCGGTGCCTCGTTTCCACGCAAGTTCCAGTTGGTGAATCACGGACGCATACACGGCAAGATCCCCCACTCCTGCACCGTTTGCGGAAAAGAGTTTTTACAGAAGCGAACACTAGTTTCCCACATGAGACGCGTGCACACGGGCGAGCAGGCGCATCCCTGCGTCAGCTGCGGCGAGGGATTCCTCACCAAGGCTGAGCTGCACCAGCACGTGCGGGCAGCTCACAACGGCGTCAATCCTAATACGAGCAGTGCAACCATCATTGCCAACCAGCAGCTGCAACAGCCTCACCACCATCCCGGACAGCATCCGCAGACGATCACTGTCGTGAGTAATCCGGGCAACTCTACGCTTCTGACGGTCTCCACTACGGATGCCAATGGTGTGGCGCGTCCGCAGTTCGTCTGCCGCGAGTGCGGTAGCGCCTTCAACAGCCGCGAGGCCTTGGCCTTGCACTTGCGCCTGCACACCGGCGACAAGAGCCTCATGACCGATTTGTGCGCCTTGACAGCAGCGCTGCCGGGTCACTTCTTGAGCACGGCCGGCCTTAACCCGGGCACTGTGGTGACGGCCAACCCGAATTTGGTGGGCCAGAATCCAGTACCCGTGCAGATCATATCGTCGACCGGCCAGGTTATGTCGCAGACCACGCTGGTGCAGGCCGCCAACTCGACCCATCCGCAGGCCGTCGTCACTGCCGTGCCAACGATGCCCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGTCAATGTGGTGCCGGCCAACAAGCCCAAGTCGCATTTCTGCGCCAGCTGTGGCAAAGGATTCGCTGCCAAGCACGGCCTCATGCAGCACAACCGCCGCCATCCGAATGGCGGCTGCACGGTGCGCACTCACGTCTGCGAGTGCGGCAAGGCCTTCTTCCAGAAGAATCATCTGATGCTGCACCAGCGCCAGCACTTGGAGACGAAGCCAGCCATATCGCAGCAACAGCTTGTTGTACCAACTACTTCTTACTAA
Protein Sequence: MCAAQNPQPPFGYTWGFADNGSRTAESVLEISPNINYTVSGESMPYLLSTDGSLAVQKDVKGALSGNKGNVVRRMYVVNDPSFPPGTQRVITTGGGSSVVKKQDSQQQVLSLDKNYLLVDQATAAAAAAAAAGDPSVAHHHTLTNGSIVDAKTGQTVLTAGSAAAKSHFGSIGALHLTQEECNEILIKRAIAAGHHQTHTITAADGSHHHSSASGATPSDILPGISVQVQKVIQGLEENEDSQGDAPNLKLEPGTLELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLLKHHLTTHARVHTGERPHICSHCGKSFAHKHCLNTHLLLHSTDRPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCADCGASFPRKFQLVNHGRIHGKIPHSCTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRAAHNGVNPNTSSATIIANQQLQQPHHHPGQHPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLSTAGLNPGTVVTANPNLVGQNPVPVQIISSTGQVMSQTTLVQAANSTHPQAVVTAVPTMPVXXXXXXXXXXXXXXXXXXXXVVNVVPANKPKSHFCASCGKGFAAKHGLMQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKPAISQQQLVVPTTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01556276;
90% Identity: iTF_00603515;
80% Identity: -