Basic Information

Gene Symbol
crm
Assembly
GCA_018150885.1
Location
JAECWT010000086.1:1250941-1254544[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6e-08 3.6e-05 23.5 0.0 1 44 132 188 132 190 0.93
2 2 5.6 5.6e+03 -2.7 0.0 9 24 312 327 311 332 0.87

Sequence Information

Coding Sequence
ATGGAAGAAATGTGTAAGAATGTGAAATCCGCCTCCATTGGATCAGTAGCTGGTGCTGGAGGAGCAGCAAATGCAAATGTTGCTCCCGTTGTTGTCTCTCAAGAAACGGAGGTCTTCACTGTCCCCGCCCTTGTGCATCAGCACAATGGCAAGGGTGTGCACTTCAAGCTGGCGCCCCCCACAGTTGCAGCCACAGCCGAGCCTGTGGAGGAGCTGCTCGGCTCTGTCATCACACACAATTGTCCCGGGACGCGTGCCAGCGCTCGGGTGATACAGAAAATGAAGCAAGACCAGACGCGCCCAATGACGCCGCCGCCCCCTGAAAAGGAGCACAGCAAGAAGGAGGAGAAGCCCACCCAGAAGACACCATCCCAGATAAGGACAGTCAATGGCAGGACGTCCTGGACGAATGTCGAAAGGAATTGCTTCTTTGATGCGTTGAACGAGTTTGGCAAGGACTTTGAGGCGGTGGCCAACTGCATCAATGCGAAGCTAAAGCGCCGCAATGCCAACAGCGAATACAGCTTCAAGACCAAGGATCAAGTGCGCCAGCACTACTATCAAACCTATCACAAGATCTGCAAATATGTGCGCTACTCGGATGAGCTGAAGAAACTCGCCCAGGAGCTGTACACACTGATTAACTACGGCGAAATGCGTCGCAAGCTGCAGTTCCTCACCGAGAAGCATTTCATGAAGCTGAAGCCGCTCATCTACCAGGGCCAGATCACAATCCGCTGTAAGGGCAAGAACATACGCATCAAGACGCCCTCCTGCAAGGCTCTGCGTCGTCTCAATCAGCTCGATGACTCGCTGGATGACATACGCCTGCCCAGCAAGGTGGAGGTGCTGCTGAGTCCCGCTAATATGGAGACATTTGGCCGGGTCCAATCGTTGGCCCAGAATCCCAGGGGTCGCATCATTGTGCCGCTGCACAAGAAGCTCGTCAGTTTCATCAAGATATTTGAGTACAAATGGCGCAGTGCCAACCAGCGACTGAACGAACAGAAGTCTTCCCTGTATCCCAACATCTCTGCCTCTGCCACTGCCACTGCCACTGCAAGCAACACCACCAGCACCACCGCCGCCAGCACGTCCACACCCAGCAACAACAACGAACCAGAGCAACCACAGCCACCAACAGCACCAGTAGCGCCAGTAGCACCAGTGGAGCCGTCACTGTGCTTCCAGCCCAAGCCGGGTGTGGCCATCCATCGGCCCCTGCTGAACATCACTGCCCATCTGAACAGCATCGACATCTGCCTGACCGCCTACGAGGAGCGTATGGGCGTTAAAGTGCGCAGCGAGACCCTCGGCAACAGTGCGGCGGTGGCGGTGGCCGCCAGTAAGCGACCACGCACCGAGAGTGGCTCAGAGAAGCGTTCACCGGAGGCCAAGAAGCCCAAGACCAGAGCCAGTCCAGTACTGGAAAAGTCCCTGGACGAGGCGGCGCTGCCCTCAGAGAACAACCCTGTCAAGCTGGAAGCTGTGAATGTGAAGGTGGAAGTTGTGAAGGTGGAAGCTGTGAAGCTGGAGGTGTGCAGCGGCGATGAGCTGGTCGAGGACACGAAGGAGTTCCTTCCTTCCGGCGATGCGGCAATCGTCACCGCAGCTGTGGCACCAGCAGCACCGCCGCCACCACCAACACCAGCACCACCACCGCCGCCAGCTACAGTGGCAGCTGCCGTTCCGGCCGTACCAGTGCCAGTGGCGGTGCCAGCACCAACAGCGCCCGCGGCAGCTGCTCGTTCCAAGCGCAAGGAGGCAAAAGAGGCGGCCGCCGCCGCTGCTGCCCGTAACTTTAAGCCCCTGCTGAGCGATAACACCATCAAACGGATGCGCAGAGGCTGGACCGTGTCGAGTGCGGCGGACATAACCATTGGGGATCTGTATGTGGTGCTGGGACAGGATTCCAAAGTAGAGCTGGAGTATTACTGGTGCGAGGCAGAGACAGTACAGTCCCAATCGCAGTCCTCCACTGTGCCGGCGACCACACCAGCCACACCAGCCACATCGGCCACATCGCTTCCATACAATACCAATGACTGTGATAGCGTGGAGCGCGTCAAGGCCGTGACCACATCGACGGTGAGCAATAAGCTGAAGCACCTGCTGCTCGTGGCCAATCTCAGTGAGCGTGTGCGCAAGCGTCAGTGCAACTGTGGCCATACCTGCGATCGCAAGCGGGACCTGATGAGCAAGGCCCAGCAATTGGCGGGCGCCAATGAAGCCGCCGCCGCCGGGGAGGGCACTTTCCGTACGCCCATGCTGCCGGTGCGACGTCCCATAGCCCATTTCATTGATCCAGTGCGTCAGCTATCGGCGCTCACGCGACAGAAGATCAACCGGCAGGTTCTGGTGCATCGACGGCTCCTGCTGCCCGGCTCGGGGGCTGGCGTACCCGGTCGTCCCTATGACCAGCTGAGTGTGCGTCAGCTGCACAACGGACTCTTCGAGCCGATTGAGCGTGCCGGTCTCACGACTGGCATCAGAGTCATCGCGGAGGATCAGCGCCATCAGCACACTCACACTGTGCCAGAGTCCGTGCAGGCCATACAGGCCATACAGGCCATGCAGGATGCCGGAGCCAGCCGTGGACCAGCGAGAGATATGCCAAATTTGGATGTTGTTCCGCCATCATCCATGGCCGACACGCTGCCAGAGGCAGCTCAAGACGAGAGCACAACACAAAACTTCTTCCGCGGCAGCGTGAGTCCGATGCATTTGCTGCGGGATTCCACCTCGAATGCGCGCTGGCTGGAGGAGAACATCAATGACTTCTCGCTGACCTCGCTGCTAGGCCATTTGGATGAGATAGATGCCACCAGGGATATAATAGACCCCTCCTCGAGCATGTCCGTGATCAGTGAGAGCAGCGTGGACTTTCGTCACAAGTTCCAGGAGATTGCCGCACTGCTGCAGCAGCAGGAGAAGGATTAG
Protein Sequence
MEEMCKNVKSASIGSVAGAGGAANANVAPVVVSQETEVFTVPALVHQHNGKGVHFKLAPPTVAATAEPVEELLGSVITHNCPGTRASARVIQKMKQDQTRPMTPPPPEKEHSKKEEKPTQKTPSQIRTVNGRTSWTNVERNCFFDALNEFGKDFEAVANCINAKLKRRNANSEYSFKTKDQVRQHYYQTYHKICKYVRYSDELKKLAQELYTLINYGEMRRKLQFLTEKHFMKLKPLIYQGQITIRCKGKNIRIKTPSCKALRRLNQLDDSLDDIRLPSKVEVLLSPANMETFGRVQSLAQNPRGRIIVPLHKKLVSFIKIFEYKWRSANQRLNEQKSSLYPNISASATATATASNTTSTTAASTSTPSNNNEPEQPQPPTAPVAPVAPVEPSLCFQPKPGVAIHRPLLNITAHLNSIDICLTAYEERMGVKVRSETLGNSAAVAVAASKRPRTESGSEKRSPEAKKPKTRASPVLEKSLDEAALPSENNPVKLEAVNVKVEVVKVEAVKLEVCSGDELVEDTKEFLPSGDAAIVTAAVAPAAPPPPPTPAPPPPPATVAAAVPAVPVPVAVPAPTAPAAAARSKRKEAKEAAAAAAARNFKPLLSDNTIKRMRRGWTVSSAADITIGDLYVVLGQDSKVELEYYWCEAETVQSQSQSSTVPATTPATPATSATSLPYNTNDCDSVERVKAVTTSTVSNKLKHLLLVANLSERVRKRQCNCGHTCDRKRDLMSKAQQLAGANEAAAAGEGTFRTPMLPVRRPIAHFIDPVRQLSALTRQKINRQVLVHRRLLLPGSGAGVPGRPYDQLSVRQLHNGLFEPIERAGLTTGIRVIAEDQRHQHTHTVPESVQAIQAIQAMQDAGASRGPARDMPNLDVVPPSSMADTLPEAAQDESTTQNFFRGSVSPMHLLRDSTSNARWLEENINDFSLTSLLGHLDEIDATRDIIDPSSSMSVISESSVDFRHKFQEIAALLQQQEKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00471552;
90% Identity
iTF_00563840;
80% Identity
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