Basic Information

Gene Symbol
JARID2
Assembly
GCA_018150885.1
Location
JAECWT010000001.1:12304952-12313520[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-22 3.1e-19 68.9 0.0 6 89 1916 1997 1911 1997 0.93

Sequence Information

Coding Sequence
ATGGTTGTCTCAAAAGACAACAAGCGTCGCCGCAAGGAGACGGAAACTCCGCCACCAGCTGCCGCGGCAACGGCATCCACTGCTGCTGCTGCTGCTGTGGAGTCGTCACCCGAAATGCCCAAGAGAACCAAGGTGCAGGCCCAGCGGAAGTTCGCCCAGGGACAGAGTGCGCCCAGCACCTCATCGAGTGGCATGGCCTACAGCAGCGTCGTGGCAGCAGCGGCTGGAGCTGGATCGGGAGCCGGAGGTGCAGGCACTGGTCCAAGCACTTCGGGTGCGGAGAGTTCGCAGCCGCCCATCGAGATACTGCCCAACAAGTGTCCCAAGCCGCAGGATTTCCTCACGTTTCTATGCTTTCGCGGCACACCCGCCCTGCCCGCTCATCTCGACTATCTGAATCAGGGTAAATCCAAGGATTCCAAAGAATCCGAAGCAACGACTACAACTCCGGCCCACAACAACAACAACAACAATAACAGCAACAAGAAGGCTCAGAACAGTCGAGCGGTCAACAACAAGAAGAAACGTGGCAGGCCGGCCAAGGGAGCGGCGGCAACAGCAGCGAAGAAGCCAGAGCCAGAGGTTGAGCCGGACCCACAGCCACCAGCGGGGGCTGATAAGTCATCATCAACAGCAGCAGCAACATCAGCAGCAGACAAAGCAGCAAGTGATAAACCCAATCTCATACCAGCAGCAGGGGCTCCAACGACAGCAACGACAGCAACGACGACAACTCCACTGCTTCCCGGAGCTGTTCGGAAGCGAGCCGAAGTTGTTACCGATGGCAATCGACGTGGCGCCAGGGGCAGGGCAGCACCTGAGAACCCCAGCAATAGCAACAGCCTGGGTGCCGCCACATCGTCCACCGCAGCAGCAGATACCAACAAGCGCCGTTCAAACAGGTCAAGCACCAAGGAGAGCAAGGCCATAATCGATGATCTGGCGGATGAGGATGAGCATGAACAGGACGATGGCCATGAGGATGAGGAGGATGACGATGAATACTTTTCAGCCCACGATGCCACCTCCCGTAATGGTGATGAGACCTCAAAGGAGGGGCCAGCTAAAGCAGAGCCTGCCAAAAGGGGGCGACCCGCAACAGCAGCAGCCAAGAAACCATCGGCGGAGCCTTCATCCGTGGCTGTTGCGGAGATTGCGCTCAAGGAAAAGGGTCCCGTGAAGCGGGTGAGGCAACGGGAATCGCCCATATTCATACCCTCGCCAGAGTCCTCTGGCCGAATGACGCGACAGCGGGCTTTTTTCGAGCCCGTCAAGGTGCCACCGCAGCAAGAGGAGCCAGAAAAGGCGAAAGAAGACTCAAAGAAGAAGAAGGAGAAGGATTCAGAGGTGCCCAAGGAAGCAAAGGGAGAGCCAGATGCAGAACAAGAGCCGGCCAAGCAGCTGAAGGAGACAAAGGAGAAGACAAATTCTAGTATTTATGCCAAAGAAGCCAAGCAGAAGCAGCAGCCGCAGCAGCAGCAGCTGGAGAACGGCGACAGTCAACATGGCTCCGGCAGCAAGGGTAAAAAGAGTTTGAACGTCTTCGACTTCAGTTCCGACGACGAGCAGCCGCTGGCCAAGTCCATAAAGCTGAAGAAGGGCGCCAAGGGGGCCAGTCCCAAGAAGGGGAATGCAGCTGCTCCTCCTCCACTAACGGGCAGGAGTCGCAAAGCGGCCACCAAGAAGCAGGAAAAAGAGAAGGAAAAAGAGGAGGAGAAGGAGAAAGAGGTTCCAGTGGCAGCAACAATAGCAGCGACAGCGGAGCCAAACAAACGCGGTGCGGCCAAGGCGGGGAAAAAGAAAGCCGAGGACCCACCAGCCGATGAACAGGAGCTGGCGCCACCCTGTCCAAAGAAAGCCACGACGAATGCCCGCCCGGGACGAAAGACAGCCAAGAGCAAAGTCACAGTCGAAGAGGCAGCCGCTGTTGAGGTGGAATCACAGCCACAGCGATCGCAGCGACCCTCACGGAAGACCAAGGAGGCGGCGGCCATCTACATGGGCATCATTGGCCACAAGCTGCAGATGGCCGACGACGACGATGATGATCTGTCGCTGAGCAGCTTCCCGGACATACCCAACGTAAAGGAGATGGAGAAAATGGAGAAGGAGATCAAAAGGAATGCGGCGGGAAAGTTGAACGTGCCCGAGGCAACGACGGTGCCAACGGCAGGTAAACAATCGCGAAAGCCGTCGCCCAAACCACCTCCAAAGGGGCAGGCAGCAGCATCAGCCGCTGTGTCAGAAGTGCCCCGAGCAGATCCGCCCTCCCCACCAGAGTCGGAGGAGGAGAAGCCACCGCCTCCGGCCAGACGCGGTCGACCCCCAAAGCAGGGAAAGGCAGCTGCTGCTGCGCCACCCGCCCACGCCAAACCCCCCATCGAGGGGATGCTCGTGAAGAAGGGCTCGCTGACAAAGATGAGCGAACAGGCGAAGCCCAAAGCCAAGTCCGAACAGTCAAAGGTCGACTCCGACGAGGAGGAAGACTTTCTAATCAACGAGGAGCTGAACGAAACGAAACGCAATCTGGAGAAGAGTTTCAGCGACTCGGATGATGAGCCACTGGCCATCAAGGTGCCGTGCGTGCCCAAAGGCGGCAGCCAGGAGAAGGATAATCATCCATTGCCAATGGCCGCCAAGCTATCATCCACCACCGCCCCCCACCGCCCAACAGCAAAGCTACCTGCAGTTCCATCTGGCACCACAGCGACAGGGACAACGTCAGCGGCGGTTCTTCCCTCAGTGGTCGTCCAATCGATGCAGCTACAGATCCAGGCGCCCATAATTCCCCCCCTGACCACACAGCAGCTGGCGATGCTGCCGCTGACCACCAAGGCGGCGACACCAATGGTAACGCCAACGCTGACAACACTGCCCCTGCCCAGTGGCATCCAAGTGGCCGCCGCCAATTGCATCTCCATTCCTCCGCTGAACTATACCCCGCTGAAGGCCATGGAGAAGAAGTCGCCGGTGCCGACATCAAAGATTCTCAATGTACCCGCCACCTATGCCCTGCCCGGAGGCAGTGCAGCGGCCGCAGTGGCTGTGGGCTTCCAAAAGACATCCTCGTATCTGCCGCAGGCATCGCCGCATTACCATTCCGGCTATGTGCGTCCCCCACCGACGCCCTCGCATCCGTTTGGTTCTGGGGGAGGACCGTCCGGCAGCAAGACTCCTGCACAGGGATCGTCGACGTCATCGCCACTGAAATACCAGACACCGCCCACCACCTATCCACCACCCATTGAGGCCTACCAGTGCCCCAAGATCAATCCGAACTTTCTCACCCCGAAATACGAGCGGAGTCCACTGCCACCCCGATCCTCGGCCTCGAGCAACTTTCCCACACCCTCGCCGGTGAAGTTTCTGCCCACTCCGACGTCCACGACGGTGGGCACGGGTACGGGCACCGCCTCCTCGTCGGCCACCAAAAGCCCCCTGGCACCGCCCACGCCTGCCACGCCACCAGTCGGCACATCTGCCAGCCAGCCAGCTGTGTTGCAGCCGTCCAGCCTCAGTTTGAGCACAGCTACAGCCCCGACGCCCAGTCCGGCATCCGCGCCAGTGGCCTCAACGTCTGCGGCGGCCGCGCAGCAAGCCAGCGCAGCAGGAGGCGCGACAACGTCAACGCCAACGCCACCGCCTGCCCATAGCAACAGCAATGCGGGCGGCAGTGGCGATCCCCTGAAGGACGAGATTGGCAGCATCCTGGCGCAGGCCACGCTGATGCCCAGCAAGGAGGAGTCCGGCAAGATCTTTGGGATAGCCAGCGTGAGCCTGGCCCAGAGCTCTGGTCCCGACAACACCAAGTGCACGCTGGGCAAGTGCGGATCCATCCACAAGCCCGTGCTAGGCCCAGTGGTGCCCACCGAGGGGTACTTTGGGGACCAGCTGACCAGCAAGGAGCGGCGCAAGGCCAAGGTGAATATGACGCACGAGCAGATCCAGAAGTGGCTGATGGAGTGCTCCTCCAATCCCGATGAGATACTCCAAGACGATCTGGACGATGATTTCGACGACAATATGCGGGTGCAGCAGTCGACCACGCCGCCACCGACGCGAGATGAAAAGGAGCTGAGCGCCAGCTTCTCGTCCTCGTCGAAGAACACGCGGGGGGGAGATCTCGGCAAGAGCGAGAGTGCCTGGTCGGCCAAGGGGCCTTCATTGAAGGCAACGCCCGTTGTGGTGACGCCCTCCAGTCGCAAGGAGCAGGAGCAGGCCGACTGTGATGTCCTGGACTGCGAGAAATCACCTACGCCCGTGAACCTCACACAGAAATCGGAGTCAGCGGCGGACAAGACAGCGGCTGCAGACAAGAAATCGGTAATCGAGCGCAAGACGAAGGAATCTGTCCGATCCAGAGCCCCTCCTCTGCCACGGAGTGCTGCTACCACGCCCTCAACGCCCACACCAACGCCCACTCCCGTCACCCCCACCAAGAGCATGCCACCAACACCGCCGCCGCCTGCTAGCAGCCAGCAGAAAGGCAACAAGGGGAAAAAGAATGCCACAGCCGCAGCAGCAGCAGCAGCACAAGCAGCAGTTTCTCCCCCACCGCCACCTCCACCCACGCCCAAGCGGACGACAGTGTACAACCAGAAGGGGAACAAGGCCACGGCCCAACAACAGGCGGAGACGAAGCAGCCGTCACCTGTGGCTGCGCCCGTGGCAGCCAAGCGAGGAAGCGAATCTATTTATGCCTTCGGCAAGGAAGAGGAGATCACTTCGGGCACCAAGCCAGGCAATCGACGTCGCGTAGAGCCCACTCCGACGCCACCGCCAGCGTCTCCAGCACCAGTGCCGAATGCATTGAGTGAGCGATCGCCGACCAAGAAGCGGGCAGCAGCCGCTGCAGCGGCCACAGCAGTCCAACTGACGCTCAGTCCCACCGAGAACTGCAAGATTGAGGGATCGAAACCCAAGACAGGAGCAGCCAGGGCGGCCAAGAAGCAGCAGCAGCAGGTGGCTCCTCCTCCACCAGTTGCAGCAGTGGAGCCGAGCGGCGACTCGGATCCCGAGGGAGCAACTTTCTACATACCTTTGCAGGGAGCGGGGGTCGGTGGCAGTGGCGAAGGCGGCATACAGGGTGTGGCCGTCAAGCTGGGACGCGAGGGCCCCGACGGACCCAACCAGAAAGTGGTGATGCAGGCGACGCTGGTGACCAAAGCCCAGATGGACACCAATTCAAAGCCGTTGCCTGAGTCGCTAAACACGAATGAGCTCGTGAAGACGCTCTTCCATGCGGCATCCAACAATGATGCCGCCTCCACAACCAGCCTGAAGAGTCTGCCCAAGGCCAGCACCTCAGCGGCAGCTGGAGGTGGAGGCGGAGGCGGAGTGGGTGCCTCGTCAAGTCTGGTGCGCGTCAATTCCAATTCGTCGCTCTTCTCGGGCTCTGCCAAGTCACGAACAGCGGCCCAGACAAGCTCTACGGCGGCGGCCGTGGCCAAGAAGTACAAGGATGATACACCCATCAAGATGGCGAATAATACGGCCTTCCCCAGGCACGATGATCCCACCCAAATGGTGGAGGCACCCATTTTCCGTCCGACGGAGAAGGAGTTTGCCGATCCCATCGAGTTCATTGAGCGGATCACACCGATTGCGGCCAGGTTTGGGATCTGTAAGATCATTCCACCAGCTAGCTTCAAGCCAGAGTGTCGGATATCGGACGAGATGCGGTTCACGGCGTACAATCAGTACGTGCACAAGATGCTGCATCGGTGGGGGCCCAGTGCCAAGGAGTTGAGTGCCATCAAGAAGTACCTGGCCACCCAGAGCATTACGATGAATCATCCGCCCTGGATTGGGGGCATGGAGGTGGATCTGCCACGACTCTATCACACCGTCCAGGAATTGGGCGGCCTCAAGGAGGTCATCGAGAAGAAGAAGTGGTCGCGGGTGGCCGAGGAAATGTGCATACCGAAGCTGGCCCAGGACCGGGTGACCAAGCTGGATGACATCTACTGCAAGTACCTGTTGCCCTACGACACCCTGTCGCCGGCAGAGCGCCAGAAGCTGTTCGACGAGGTCGAAGCGGACTGGGCCAAGCGGGAGGCCAGAGCCCGTCGCAATGCGGATCGGTTTGTCAACACGGAGAGCGTCTCGAATGAGGAGGATGACCTGAGCAGCGACGAGGATGAAGAGTCGGAGGAGGAGATCGATGGCGTGTCCATGGAGTGCATTGTCAAGGGCAGGAGCATGCCCCTCAGCCAGTTCTATCGCATCGCCAGGAACACCATGGCCCTGTGGTTCAAGAGCACCGATCCCACCGTCAACGAGGTGGAGGCCGAGTTCTGGCGCCATGTCGCCGTCCGCGACAGTCATGTGTGTGTCCATTCGGGATCCATCGACAGCTCTGGCTGGGGCTATGGCTTCCCCAGTCCCGGTCCCAAGGGCAAGGGCTCCAACTATGCCCGCCATCCCTGGAATCTCAAGGTTCTCACCAACAATGCTGGCTCGGTGCTTCGTTCGCTGGGGCCCGTGATGGGCGTCACCGTGCCCACTCTCCACGTGGGCATGCTCTTCTCAGCCTGCTGCTGGTACCGGGATCCCCACGGTCTGTCCTGGATTGAATACCTCCACACGGGTGCCTCCAAGCTGTGGTACGGCATACCCGACGATCAGAGTGCCAACTTTAGGTCCGCCCTCACGTCGCTGATTCCAACGCACTGCCAGAACAAGACCATTTGGCTGCCCTGCGATACGGTGATGGTGCCGCCGCATATGCTCACGGATCGAGGGGTGTCTCTGTGCCGCATCGAGCAGAAGCCGGGCGAGTTTATTGTGGTCTTTCCCCGGGCCTACACCTCCAGCCTGGCCACCGGCTATGTGGTCTCCGAGAGTGTCTATTTCGCCACAATGTCGTGGCTGGATTTGGCCAAGGATGATTTCAGGGACATCCATGAGAGCTGCGAGCCAGCCATGTTCTCGCTGGAGCAGCTGCTGTTCGCCCTGGGCTATGACCAGCGCGTCAACTCCGATACCCTCCATCAAATGCTGCCCATGCTCAACGAGGTCTGTGAGAAGGAATCTGCAGCGCGAGAGCAGCTTAGAGCCGCTGGCGTGACATCCACCGAAAAAGTGCAAGCGGAAAAGGGCCAAAAGGCCAAGAAGCAACAACTGCCGCCGCACAAGTCCATCGAAAGCGAATGCGATCTCTGTCGTGCCAATCTGTACATATCCATGGTACGGACCGAGGACGGGAACGTCTACTGTCTGCAGCATGCCCTAAAGAACCTCAACAATGGCAACATCCAGGCGAAGCAATGCAAGCTGATTTACGCGTACAACGTGGACGACATACAGCAGTTGATACGCCAGCTGCAGGAGAAGATACACCACAAGGCGGCCGTGAAGAAAAAGTAG
Protein Sequence
MVVSKDNKRRRKETETPPPAAAATASTAAAAAVESSPEMPKRTKVQAQRKFAQGQSAPSTSSSGMAYSSVVAAAAGAGSGAGGAGTGPSTSGAESSQPPIEILPNKCPKPQDFLTFLCFRGTPALPAHLDYLNQGKSKDSKESEATTTTPAHNNNNNNNSNKKAQNSRAVNNKKKRGRPAKGAAATAAKKPEPEVEPDPQPPAGADKSSSTAAATSAADKAASDKPNLIPAAGAPTTATTATTTTPLLPGAVRKRAEVVTDGNRRGARGRAAPENPSNSNSLGAATSSTAAADTNKRRSNRSSTKESKAIIDDLADEDEHEQDDGHEDEEDDDEYFSAHDATSRNGDETSKEGPAKAEPAKRGRPATAAAKKPSAEPSSVAVAEIALKEKGPVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVPPQQEEPEKAKEDSKKKKEKDSEVPKEAKGEPDAEQEPAKQLKETKEKTNSSIYAKEAKQKQQPQQQQLENGDSQHGSGSKGKKSLNVFDFSSDDEQPLAKSIKLKKGAKGASPKKGNAAAPPPLTGRSRKAATKKQEKEKEKEEEKEKEVPVAATIAATAEPNKRGAAKAGKKKAEDPPADEQELAPPCPKKATTNARPGRKTAKSKVTVEEAAAVEVESQPQRSQRPSRKTKEAAAIYMGIIGHKLQMADDDDDDLSLSSFPDIPNVKEMEKMEKEIKRNAAGKLNVPEATTVPTAGKQSRKPSPKPPPKGQAAASAAVSEVPRADPPSPPESEEEKPPPPARRGRPPKQGKAAAAAPPAHAKPPIEGMLVKKGSLTKMSEQAKPKAKSEQSKVDSDEEEDFLINEELNETKRNLEKSFSDSDDEPLAIKVPCVPKGGSQEKDNHPLPMAAKLSSTTAPHRPTAKLPAVPSGTTATGTTSAAVLPSVVVQSMQLQIQAPIIPPLTTQQLAMLPLTTKAATPMVTPTLTTLPLPSGIQVAAANCISIPPLNYTPLKAMEKKSPVPTSKILNVPATYALPGGSAAAAVAVGFQKTSSYLPQASPHYHSGYVRPPPTPSHPFGSGGGPSGSKTPAQGSSTSSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSPLPPRSSASSNFPTPSPVKFLPTPTSTTVGTGTGTASSSATKSPLAPPTPATPPVGTSASQPAVLQPSSLSLSTATAPTPSPASAPVASTSAAAAQQASAAGGATTSTPTPPPAHSNSNAGGSGDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLTSKERRKAKVNMTHEQIQKWLMECSSNPDEILQDDLDDDFDDNMRVQQSTTPPPTRDEKELSASFSSSSKNTRGGDLGKSESAWSAKGPSLKATPVVVTPSSRKEQEQADCDVLDCEKSPTPVNLTQKSESAADKTAAADKKSVIERKTKESVRSRAPPLPRSAATTPSTPTPTPTPVTPTKSMPPTPPPPASSQQKGNKGKKNATAAAAAAAQAAVSPPPPPPPTPKRTTVYNQKGNKATAQQQAETKQPSPVAAPVAAKRGSESIYAFGKEEEITSGTKPGNRRRVEPTPTPPPASPAPVPNALSERSPTKKRAAAAAAATAVQLTLSPTENCKIEGSKPKTGAARAAKKQQQQVAPPPPVAAVEPSGDSDPEGATFYIPLQGAGVGGSGEGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPESLNTNELVKTLFHAASNNDAASTTSLKSLPKASTSAAAGGGGGGGVGASSSLVRVNSNSSLFSGSAKSRTAAQTSSTAAAVAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSITMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWSRVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDLSSDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLHQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQLPPHKSIESECDLCRANLYISMVRTEDGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKIHHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00514676;
90% Identity
-
80% Identity
-