Dtri006259.1
Basic Information
- Insect
- Drosophila tripunctata
- Gene Symbol
- stc
- Assembly
- GCA_035047385.1
- Location
- JAWNPS010000163.1:164108-168704[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.5 1.4e+04 -3.7 0.5 15 18 376 379 375 380 0.79 2 15 2 1.9e+04 -4.1 1.6 15 19 403 407 402 407 0.81 3 15 0.057 5.4e+02 0.8 2.0 4 11 436 443 435 444 0.90 4 15 5.9e-07 0.0056 16.7 15.1 1 19 448 465 448 465 0.93 5 15 1 9.7e+03 -3.2 1.2 6 10 491 495 490 495 0.90 6 15 1.4e-06 0.013 15.6 11.9 2 18 502 518 501 519 0.92 7 15 2 1.9e+04 -4.4 1.9 7 13 523 529 523 530 0.73 8 15 2e-09 1.9e-05 24.6 12.9 1 19 559 577 559 577 0.98 9 15 2.1e-05 0.2 11.8 16.2 4 19 625 640 618 640 0.87 10 15 0.15 1.4e+03 -0.5 11.7 1 11 680 690 680 702 0.79 11 15 2.8e-10 2.7e-06 27.4 15.1 1 18 707 724 707 725 0.97 12 15 1.7 1.6e+04 -3.9 0.9 6 10 754 758 754 759 0.81 13 15 2 1.9e+04 -9.8 12.4 9 18 771 781 761 782 0.69 14 15 1.6e-07 0.0015 18.6 14.3 1 16 818 833 818 843 0.94 15 15 3.2e-05 0.3 11.2 12.5 1 19 850 869 850 869 0.96
Sequence Information
- Coding Sequence
- ATGGCTGAGTATTggcagccgcagccgcagcaacagcagcagcagcaggcaccgcaacaacaaattacaaatggAGCTAGGGATGAGTCAGCTTCTGCCGCTGCCgtcagtggcaacaacaataacaactatgTTAACTTTAATCAGTTTATCACGCAACATAATCTGACAGCTGCTGGCAGCGCTGGCTTTGCCGCCACTGTGCCCTCTGTCTCCTCTGccagcaatggcaacagcaaccaatTTGTTGGTGCACAAACGTATTTCGGCAGCAACAGTTatgcagcaccaacaacatcagcagctgcagcagcaacagcagtttaTCCAAATCTGTATTCACCTTTTGGCAGCACTGCCTTTGCCAGCAGTGGCTTCGATTTCAGCAACTCTAAGCTGCAGCCAAATGCACCTGAATTTGTGCCCAATTTTGCCAAACTCAGCTTGAGCGGCAGCacagaacagcaacagcagcagcagcagcaaccgctgagcaacagcagcaactacaataataacagcagcagtagcagcagcaataacactGCCAGTCAGTCCAatggagcaacaacaaatcaacaacaacactatgCACAACAGAGGCTGAACAACAAAACGCaaacgaacagcagcagcagcaacggaggcagcagcagcggcggcggcggcggcggcggcggcggcgacaACAgtcgtcagcagcagcagcagcagcgacgcagcAACGATTATAGAGAGGATCGCGGGGAACGCTATGAACGCAATGAACGCAAAAAGCCGCAGAAGCAACAACGCTACGATAATCATCGCAGCAATAAGCGACGCGATGATTGGAATCGCAATCGTGATCGCATCAATGGCTATCCACGTGCCACAGACAACGAACTggacaccagcaacagcaacgataGCGCACAGCCATCGCCAGAGAAGCAATCACATACCCATAACCATAACCATAACCATACCCATGCCCATCCACAACCCCAACAAATCTCACCGCGTCGCGCCTTGGACAATGAGAAGCTGTCGCAGCGAGAGAAACTGATGCGTGACATTGAACAGCGGCGTCTGGAGTGTCTGGTGTGTGTGGAGCAGATCAAGTCGCATCATGGCACCTGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATTACGTGGGCCAGCAGCTCCAAGTCTGCGGAGGGTTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGAGCTGCCACGCGACTATCTGTGCTTCTGTGGCAAGCTGAAGAATCCGCCACTGACGCGCACCGAACTGGCGCACAGTTGCGGTGAGCTGTGCTGTCGGGTGGAGGGTTGCAGTCATGCCTGTACATTGCTGTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCGAATGTGAGTCGCAGCTGCGGCTGTGGACGCACCAACAAACTGATGCAGTGTGCCTTGAAGCAGCCGCTGCAGTGTGAGGCGGTGTGCGATAAGCTGTTGAACTGTCAGGAGCATCGCTGCTTGGAGCTCTGTCACGACGGCAAGTGTGCGCCGTGCGGGGAGCAGGTGGAGCAGCAGTGCCACTGCGGCAAGCAGCAGCGTGAGGTGCTGTGCACCCGGGAGAGTCAGGATAAGCGGCACTATTCGTGCAAGGAGTGCTGTGGCAAGGCGCTGCCGTGTGGCAATCACAAGTGCAAGGACTCGTGCCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCGCAGCAGATTACCAGCTGTCCGTGTGGCAAGTTGGCGGTGCCGCTGGAGCAGCGCAGCAGCTGCTTGGATCCGGTGCCTACGTGCGAGGGCATCTGTGGCAAGACGCTGCGCTGCGGCAAGCCAGCGCATCCGCATCAGTGCAGCAGCAAGTGCCACTTGGGGCAGTGTCCGCCGTGCAGCAAACAGACGGCTGTCAAGTGCCGCTGCGGACACATGGATCAGCTGATCAAGTGTCGCCAGCTGTCCACGCGTGCGGACGATGCACGTTGCAAGCGTCGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAACGTGGAGTGTTGCATCGATATCGATCATGCCTGTCCGCTGCCCTGCAATCGCACCCTCAGCTGTGGCCGCCACAAGTGCGATCAGCCCTGCCACAGGGGCAACTGTCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTGTACTGTGAGTGCGGCGCGGAGGTCATCTATCCACCGGTGCCCTGTGGCACCAAGAAACCCATCTGCAAGCGTCCCTGCTCCCGCACCCACAACTGCGAGCATGCCCCGCAGCACAACTGCCATGCGGCCAGCACCTGTCCGCCCTGCATGATGTTCACCACCAAGTGGTGTCATGGCAACCACGAGCAGCGCAAAACCATTCCCTGCTCCCAGTCCAGCTTCAGCTGTGGCCTCGCTTGTGGCAAGCCTCTCGCCTGTGGACGCCACAAGTGCATCAAACCCTGCCACGAGGGCGAGTGCCAGCAAGCCGGCGAATTGTGCCGCCAGAGCTGCACCAAGCCACGCCTCCTCTGTGGCCACAAGTGTGCGGCCACCTGCCACGACAACGAGTGCCCCGAAACACCCTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAACCGCAAGCTGAACCGCAGCTGCCAGGAACTGGCCAGGGAGCACAGTCGCATCGCCACCGCCCAGCTGGCCTCCTCCATGGCCGAGATGTCGCGTGGCAACTACATGGAGCTCAGCGAAATTCTCGCGCCCACCAAAACCATTAAATCCAATAAAACatTGGACTGCAATGAAGAGTGTCGTCTGCTGGAGCGTAATCGTCGCCTGGCTATCGGTCTGCAGTCGCGTAATCCGGACACGCAGTTAAAatctttaacaaaatattcgGAATTTACGCGTGGATTTGCCAAGCGGAATCCGGCCTTAACCAAGAGTGTCTATGAAACGCTAAGTGATTTGGTTAAGTTGGCCAAGGAGAGCAAACAAAAGTCAAGAAGTCATTCGTTTCCCACAATGAATCGTGAGAAGCGTCAATTGGTGCACGAATTGTGCGAAGTGTTTGGCATAGAGTCCGTCTCCTATGACAAGGAGCCCAATCGTAATGTGGTCGCCACGGCACATAAAGAACGCTGTTGGTTGCCAGCCACCAGCATCATGGAGGTTCTGGCACGCGAATCTGGACAACGTCGTGTTGTAGTACCCAACAATAACGCCTGGAGTCTTAAAAAGTAG
- Protein Sequence
- MAEYWQPQPQQQQQQQAPQQQITNGARDESASAAAVSGNNNNNYVNFNQFITQHNLTAAGSAGFAATVPSVSSASNGNSNQFVGAQTYFGSNSYAAPTTSAAAAATAVYPNLYSPFGSTAFASSGFDFSNSKLQPNAPEFVPNFAKLSLSGSTEQQQQQQQQPLSNSSNYNNNSSSSSSNNTASQSNGATTNQQQHYAQQRLNNKTQTNSSSSNGGSSSGGGGGGGGGDNSRQQQQQQRRSNDYREDRGERYERNERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRATDNELDTSNSNDSAQPSPEKQSHTHNHNHNHTHAHPQPQQISPRRALDNEKLSQREKLMRDIEQRRLECLVCVEQIKSHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPRDYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKLMQCALKQPLQCEAVCDKLLNCQEHRCLELCHDGKCAPCGEQVEQQCHCGKQQREVLCTRESQDKRHYSCKECCGKALPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLAVPLEQRSSCLDPVPTCEGICGKTLRCGKPAHPHQCSSKCHLGQCPPCSKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNVECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHNCEHAPQHNCHAASTCPPCMMFTTKWCHGNHEQRKTIPCSQSSFSCGLACGKPLACGRHKCIKPCHEGECQQAGELCRQSCTKPRLLCGHKCAATCHDNECPETPCKELVEVQCECGNRKLNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTIKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVVVPNNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -