Dtri016635.1
Basic Information
- Insect
- Drosophila tripunctata
- Gene Symbol
- -
- Assembly
- GCA_035047385.1
- Location
- JAWNPS010000334.1:3271796-3277141[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00046 0.031 14.8 0.1 1 23 170 193 170 193 0.96 2 14 0.0016 0.11 13.1 2.9 2 23 242 264 238 264 0.89 3 14 0.014 0.94 10.1 0.9 1 23 359 382 359 382 0.93 4 14 0.069 4.7 7.9 4.3 2 23 431 452 430 453 0.95 5 14 0.0024 0.16 12.5 0.1 1 23 517 540 517 540 0.88 6 14 2.2 1.5e+02 3.2 0.1 2 14 559 571 558 583 0.85 7 14 0.00077 0.052 14.1 3.3 2 23 591 613 591 613 0.96 8 14 0.0033 0.23 12.1 0.1 1 23 717 740 717 740 0.95 9 14 0.026 1.7 9.3 0.7 1 23 808 831 808 831 0.93 10 14 0.0013 0.087 13.4 2.2 2 23 881 903 880 903 0.97 11 14 0.0036 0.25 12.0 3.8 1 23 994 1016 994 1017 0.94 12 14 0.059 4 8.2 1.5 1 21 1069 1089 1069 1090 0.95 13 14 1.7 1.1e+02 3.6 0.1 3 23 1139 1162 1139 1162 0.87 14 14 2.4 1.7e+02 3.1 0.5 1 10 1180 1189 1180 1204 0.64
Sequence Information
- Coding Sequence
- ATGGAAGGTATGGATTTGTGGACGTCTATGTTTTCCAACGATTTTGAGGAGGgtgacggcgacggcgacggcgaggCAGATAATTATAATCAAGGCAACAACGAGTTTATGGGCgacgatgaagaagaagaggagcaAGAGGACGAACAGGAAGCTGATTTAGACGACGATGAAGAAAGGGAGGAGGAGGGAAAACGACCAAAGGGAACTGAACCAGATGACGATGCcatatttgattttgaattgGAGCCAATTGTAAGTATTGCCGAACCAGAAACCGGATCATCTGTGCGACGCGGAACTGTTGTTCTGGCACCTCCAGTGCCTACGAGTGGACCAAGCATTAGGAGCATGCACCGCCAGTCACTGCCAGCATCGTTTGGCTCAACATTGGTGGCACGCGGATCTGGTGGTGCAGGTGGTGGTGCTTCAGTGCGTCCAACGACCTCACAAATCAATGCCACCGACGAAAATGGCGTGATTATTAATTACGAGTTGGGTGTGATTTACATATGTCCCGCTTGTGGTGCCGAGTATCGGCAGCAGGACATGTGGAAACGTCATATGAACCAAATGCATCAGTTTAATACACGCAAAGGACTTAATTTTGTGGCCATTGATAAGCTATATCATCGGTGCCTGGAGTGCAATAAGCGGATAGCAATGCACAGTCGGGAGAATCTGTTGAAGCACAAGTTTACACATTTGCCATATCGTTGCACCAAGTGCTATATATGTAAGCGAGAGTACAAATACAGGCAGGACCTGATGGTGCATCTGCGGATGGTGCACTGTGACGAAGTCGTAACCATGATGCGAGACAGCGATGGCAACGCAGGACGTAAGACACGTGTCCGTGAACCGCGCACTGAACCACAAACTCCAATCACCGTTATCCctgacgacgatgatgatgacattGCCATGGAAGAGCCAGAGACACCAGCTATTACTCTGTTTGAGGAGGACGAGCAGAGTTGCAGCTCATTGGCCAAACGCAAGCGTAGTAATCCCAGTagtaatggaaatggaaatggcaatACTGCTGCCGATTTATGCGAGGattatatacactatatgtGCCCCGACTGTGGCACAGACTGTGACACTCATGCCCAGTGGAGTCAGCACATTGAATTCGTGCACGACTATGTGAGCAGGCGAGGACTCAACTTTCTCTGCGTGGACATGCAGATGCAGTGCCTGGAGTGCAAACAGTTTGTCATACCGAATACGATAAAGACACTGCGTGCGCACAAGTTTAGCCATTTGTCACAGCCGGATTGGATGCGCTGCAAGCTGTGCTACAAGGGATATAGGGAACACAATGAACTAGTGAAGCATCTGCTCAAGCATCATCATTTAGAGACGCTAATGCCCGATGCCGAGGTGGAAACGGAGACGGAACCCTTGCCTAGTGCCAGCAATGCTGAGGATGGCGATGATAATGCTGACAATGGCTGCGACGATGAGCTGTTACAGTGGGACGATGCACCACGACGAGGCGGACGCATTAGTAGCGATGATATGTACGAACCGCACATTGACTATCTGTGTCCGCAGTGTGGCAGAGAGTTTATTGAGAAGAAAAATTGGCGCACTCATGTTGTGCTGGCGCATGGCATGAATGATTTGTCCAAGCTGAACTTTGAGGTGATCAACGACAGACAATTGAAGTGCACCGAATGCGACAAGATCATTACGAATGCATATGGAATACAGAATGCACAACAGCATCGGATAACGCATCTGCCGTTCAAGGCGTATGCACGTTGCCGCAAGTGCCACAAATCATATACGGATCGCAAGGGTTTGGTCAAGCATCTGGCCACATACCATCGAATTGGCTACGAACCGCGTAAACAGACTGGAACGGCTGCGGGGACTACGGGGACTATGTCCACATCCAAGTCACAGACGCCGCGTAAACAAATTGTAACGGTGGCAAATGAAACATATGAGATTATCTATTTGGATGAAGAGCAATCGCCACctagtaacaataacaacattaacGAGGAGAACGATTTTGGCGAACAGATGCAagcagatgatgatgattatggtATCAgtgccaccaccagcagcagctgtagcaTTAGCAAAAATCGTCTATTGCCGCCTGTGCTTGTGCCGAATCCCAATCGCTACAAGTGCGTAGATTGTGGCTCCCTGTTCCCTACACAAGTGGCACTCAAGTTGCACATTAGTGAGGAGCATGATTTCATGGATGCACAGTATAACGCCAAAAAGTTTGATAATGCCGAATCGACTGAACAGGCGGCTTCTGCATCAACTGCAGAGCCAGTGACAAAGACATCACCAGccacaggcagcagcagcagcagcagcgggagcGGCAAGAAGGCCACTGCCAAACTGAATAGCGCTGGTACATCAACCATTGAGCAGAACTATATATACCTGTGTCCGTCGTGCGGCAAGGCGCACAAGACGCAATTCGAGTGGCGACGTCACATCAATGATGCCCACAATTTTGACAAGCGTCAGTATTTGAATATGCGTCAGTTGGACAAGTATCGGTATCAGTGCACTCAGTGCAAGGATATTGTGAGCAGCTCAAAGCTTAAGGGTCTGCAGGATCATCACTTTCGCCATCTGCCCTATCGTCTGTATCTGAAGTGTCTTGTCTGCGGCACCTGCTACAATCACAAGCCCAATATTGCAGCGCATCTGCGTACGCGTCACAATATCCATGAGGTGGATACGCCGTGGCGTGAGCTGCAACCGAAGCCACAGTACAACTATGTGAAGGATAAAGAAAAGGAAGCAAGTGTTATATCATCGTCAACACCATCATCACCGACGCCGGGCgccagtagcagcagtagcagtggtGTTAATTTGGGACGCACATTAAAACCGATGCCAGGCATATTGGCCACTCGACCGGCTGGTCTGAATACGCTGGAGGACAGCATTTCGTATCACAATGCTGTGGATCTGGACTTTATCACGTACTATTGTCCCAAGTGCAATAAGAACTTTGATTCGCATGCCTTTTGGCGCAAACACATTGTCGAACATCACAATTTCAATAGTCGACAGGGTCTCAATTTTCGTCAGATCGATATGCATCACTATTTGTGCCTCGAGTGCTATAAGCGTGTGACTGTCACCCACACCAAGGGCGCCATTGGTCAGCTGCAGTCCCACAAGTTCCGACACTTGCCCTATCGCTCATTCAAATGTCTCACCTGTAATGGGGAATTTGTGCGCAAGCAAATGTTCTTTAAACATCTGAATCGTGATACAAATCGTTGCGACAACCAACCACTCAGTGTCCAGGACAATGAGGATGAACACGTTGCGGTGGAGCAGCCAGAGACTGTTGCTGTGgtatcagcagcagctactaCAGGTGATGTGGATCCGGCATCCTATCGACTGTGGTGTCCGCAATGCGGTGATAACTTTGTCACCAGCAGCAAAGCACTGTGGCGCGAACACATCAACATGTATCATGGCCTGGGCAAACGGGATCATCTGCATATGCGTAAGCTGGCAGATGAACTGTATCGCTGCACAGACTGTGATGAGCAGCTGCAAACGAAACAGTTGAGGGTGCTGCAAGAGCATCGCTTCCGACATCTGCCCTTTGCTGGGTATATACGCTGTCAGCTCTGTAATGCAGATGGTCAGGAGGAGGCTGAGGCAGCTGGTCTGCACAGCATGCAAGAGTTGCAGCAACACATACGTGACAAGCATCCCGATGTGCCCGAGCAGCCGGATATAGATAGCACCCACTCCCAAGCCCAATCACAATCTCTGTTGGTGGATGAGGACAGTGGGAGTCGGTCAAAGAATGAGTCAACTGGAAATGGACGTTATATGCCACTGCCACCGCATTTGCTGGATGATGATGTCGACGATGTGGCATTTGAGGCACAGTATCTgcttagttaa
- Protein Sequence
- MEGMDLWTSMFSNDFEEGDGDGDGEADNYNQGNNEFMGDDEEEEEQEDEQEADLDDDEEREEEGKRPKGTEPDDDAIFDFELEPIVSIAEPETGSSVRRGTVVLAPPVPTSGPSIRSMHRQSLPASFGSTLVARGSGGAGGGASVRPTTSQINATDENGVIINYELGVIYICPACGAEYRQQDMWKRHMNQMHQFNTRKGLNFVAIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVVTMMRDSDGNAGRKTRVREPRTEPQTPITVIPDDDDDDIAMEEPETPAITLFEEDEQSCSSLAKRKRSNPSSNGNGNGNTAADLCEDYIHYMCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFLCVDMQMQCLECKQFVIPNTIKTLRAHKFSHLSQPDWMRCKLCYKGYREHNELVKHLLKHHHLETLMPDAEVETETEPLPSASNAEDGDDNADNGCDDELLQWDDAPRRGGRISSDDMYEPHIDYLCPQCGREFIEKKNWRTHVVLAHGMNDLSKLNFEVINDRQLKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATYHRIGYEPRKQTGTAAGTTGTMSTSKSQTPRKQIVTVANETYEIIYLDEEQSPPSNNNNINEENDFGEQMQADDDDYGISATTSSSCSISKNRLLPPVLVPNPNRYKCVDCGSLFPTQVALKLHISEEHDFMDAQYNAKKFDNAESTEQAASASTAEPVTKTSPATGSSSSSSGSGKKATAKLNSAGTSTIEQNYIYLCPSCGKAHKTQFEWRRHINDAHNFDKRQYLNMRQLDKYRYQCTQCKDIVSSSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIHEVDTPWRELQPKPQYNYVKDKEKEASVISSSTPSSPTPGASSSSSSGVNLGRTLKPMPGILATRPAGLNTLEDSISYHNAVDLDFITYYCPKCNKNFDSHAFWRKHIVEHHNFNSRQGLNFRQIDMHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDNQPLSVQDNEDEHVAVEQPETVAVVSAAATTGDVDPASYRLWCPQCGDNFVTSSKALWREHINMYHGLGKRDHLHMRKLADELYRCTDCDEQLQTKQLRVLQEHRFRHLPFAGYIRCQLCNADGQEEAEAAGLHSMQELQQHIRDKHPDVPEQPDIDSTHSQAQSQSLLVDEDSGSRSKNESTGNGRYMPLPPHLLDDDVDDVAFEAQYLLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -