Dtri009910.1
Basic Information
- Insect
- Drosophila tripunctata
- Gene Symbol
- -
- Assembly
- GCA_035047385.1
- Location
- JAWNPS010000231.1:1121673-1125363[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.014 0.98 10.1 3.7 3 23 318 338 316 338 0.97 2 12 0.0055 0.37 11.4 0.6 1 23 344 369 344 369 0.92 3 12 0.012 0.8 10.4 1.3 1 23 376 401 376 401 0.94 4 12 0.00031 0.021 15.3 2.2 1 23 413 435 413 435 0.97 5 12 2.2e-06 0.00015 22.1 0.1 1 23 442 464 442 464 0.98 6 12 0.014 0.97 10.1 0.2 1 23 470 492 470 492 0.97 7 12 0.076 5.1 7.8 3.0 1 23 498 521 498 521 0.97 8 12 0.0058 0.39 11.3 4.6 1 23 527 549 527 549 0.97 9 12 0.12 8.1 7.2 5.3 2 23 556 577 555 577 0.96 10 12 0.00013 0.009 16.5 0.2 1 23 688 711 688 711 0.95 11 12 0.12 7.8 7.2 1.3 1 21 717 736 717 739 0.75 12 12 1.8e-07 1.2e-05 25.5 3.0 1 23 745 767 745 767 0.98
Sequence Information
- Coding Sequence
- ATGGATGTGGCGCGGACATATTCGATACATACGCTGTGTCGCATCTGCCTCAATTTGCTGCAAAACGATGCTGCCTATGATTTGTATATGGTGCCAGGGCTGGCAAAGAAACTCTGCCTCTGCACATCGCTGTCGGTGGAGCAAAACGATGGTTTTCCCAAAAACCTGTGCACCAATTGCTACAGTCGCCTCAACGATATGCATGATTTCCAGAAGCTATGCGTGGACTCGGTGCAGAAATTTCAAGACATGGTGGCGAGTAACGCCTTCACCTGTCAATCAAATTTCGATGTTTTGGACACAAGTGTCTCGGCTCACGATTTGCCCAATGAGGATGAGGATCATATTAACTATGATCCACTGTTGAATCACAAAATGGAGTTGATAGAGAACGAAGAGGATGTCTTTAAGATGCTCGAGGATGTGGACAAGGAGGCCGAGGAGGTGGAAAAGGAGGTGAAGCAGGTGGGCAAACTGAAGCAGCGCGAGATTAAGACacaaaacagcagcacaaacaTGTTCAATGCAcatgaggatgaggatgacgAGGACGACGATGAGGACTCCCAAATGGGCGGCGGtgctgatggtggtggtgctggtggctCTGTTTACTCCCTAGAAAGTGGCAATGATAATGATAGAGACATTGACTTTGAACCCAATAGCAGTGATGATGATTTACCTTTGGCGCAACGCATGCGTGGCAAGAACAAgaccacaactacaacacgTGCAGCAGCCAACAAGAGCAAGACCAAGACCAGGGGCAGGcccagaaaacaacaacagcagcagcagcagcagcaacgtgaAGCACTGGAAGAGGACTACAGCACCTCCGACACAtccgatgacgatgacgacgaggAGGATGAGGAAGGCAAACCCAAGAAACAGAAACGCAAACGCATTCCGGCGGCAGAGCGGCATCTGCATCGCATCATCGATTGCCACATCTGCCATCAGAAGTTCAAGAAGGCCATAAGGTATGAGGAGCACATGAAATATCACAACGATCTGCTGCCGTTTCAATGCAAAGTGGAGAGCTGCAAGAAGGGTTTCACCACCGCCAATGGACTGCGCATACATGTGGATCACGCCCACACCGAACTCTCCGAGGTGCACACTTGCAGTGTGGAGGGTTGTGGCAAGACCTTTCCACGCATACGTCTGCTCACATTTCATCTGAAGAAGATGCACAATATATCCAAGTCGGCAGCGCCTTTACGTGACTTTCCCTGCACCGAATGCGACACCGTATTCCGCTGTCCCACTGCACTCAAGAAGCACATGTATAAACACACCGGCGAGGAGCTGCCCTATCCGTGCAACATCTGTGGCAAGCGTTTTGTCATCAACAGTGCGTTACGTGATCATCTAATGCGTCATGCGGGCATTAAGAATCATGTGTGTCCCTATTGTGGAGTGGGCAAGACGACGCGACAGGAATGGAACGCACACATACTCACCCACACCAAGGAGAAGAAGTTCAAGTGTCGCCAATGCGATCATGCCTCACACAACAAACAGGCGCTATCGAATCACGTCAAGGTGGTCCATATGAAGATCAAGAACTTTGCTTGCCAATATTGTGGCAAGACCTTTGGCAAGTCGCATGCCTGCAAGGTGCACGAACGCACGCACACGGGTGAGAAGTGTTGCGAGTGCAAGATCTGTGGCAAGATCTTCCTATGCGAGAAGAGTTTAACCAAGCATTTGAAGACGCATGAGAAACGCGACTTGCCGCCGGTGGATATGCAACGTGCGTTAAACATTCCGCTGTCAGTAGCTGGCACAGCTCAGGGTATGCAGGTGGCCGGTGGCATGCCCCAGGCGCAGCACATGCCACAATCAGAGCACATGGCAGATGAGCTGCTCAAGGCctgcggtggtggtggtgcaccAGGTGGCGTGCCAGCCACCGCTAAGCCCAAAAACTCAAGACGTGTGCAACGTGTGGACATTTCACAACTCGCTGGCACCTCTGTCAATCCCATACCCTCTGTGTCGGTGCCCTCCTGGTCACCACAGGTCAACTTCACCAAGAAGGAGGGCCAACACATTTGTCCCGGCTGTGGACGTGGCTTTAACAACATTGGCAACATGAAACTCCACTACAAGATCATCCATGAAAAGGTCAAGGATTTCGCCTGTCGCTTCTGTCCCAAGCGTTTCTCCAAGGCACAAATCTTGCGGCATCACGAATGGATACACACGGGTGAGAAGCCCTTCGAGTGCAAGATTTGTGGCAAGCATTTCAGGCAGGAAACAGCGCTGAAGAAGCACATCAAGACGCACGACAAACCCAATAGGCGACACTATCCGGAGAGGGTGCAAGAATCGCCAACGTTTCATAAGATTGAACCACGTGAAATCGATCGAGATCGAGAGCCACGTAACTATGACCAGTATCAGGATCCCGCGGCAGAGCGTGCGGCAGCCACTGCTGAACTGTTGGCCCACCAGATCGAGGAGAACGAGGCGAAACGCAAGGCGGACATTGAGCGTCGTAAGATACAGGAAGCTGCCTGTGAACAGCTCAACAAGTTGCAGAAGCAGCAGGAAATTGAGAAGGCCACCCAATCCTATGATGGCTACTATGCACAAAAGGCTCAAGCCGAGGGCATCAGTGTGGATGCCCTCAAAATAGATCATGTCTAA
- Protein Sequence
- MDVARTYSIHTLCRICLNLLQNDAAYDLYMVPGLAKKLCLCTSLSVEQNDGFPKNLCTNCYSRLNDMHDFQKLCVDSVQKFQDMVASNAFTCQSNFDVLDTSVSAHDLPNEDEDHINYDPLLNHKMELIENEEDVFKMLEDVDKEAEEVEKEVKQVGKLKQREIKTQNSSTNMFNAHEDEDDEDDDEDSQMGGGADGGGAGGSVYSLESGNDNDRDIDFEPNSSDDDLPLAQRMRGKNKTTTTTRAAANKSKTKTRGRPRKQQQQQQQQQREALEEDYSTSDTSDDDDDEEDEEGKPKKQKRKRIPAAERHLHRIIDCHICHQKFKKAIRYEEHMKYHNDLLPFQCKVESCKKGFTTANGLRIHVDHAHTELSEVHTCSVEGCGKTFPRIRLLTFHLKKMHNISKSAAPLRDFPCTECDTVFRCPTALKKHMYKHTGEELPYPCNICGKRFVINSALRDHLMRHAGIKNHVCPYCGVGKTTRQEWNAHILTHTKEKKFKCRQCDHASHNKQALSNHVKVVHMKIKNFACQYCGKTFGKSHACKVHERTHTGEKCCECKICGKIFLCEKSLTKHLKTHEKRDLPPVDMQRALNIPLSVAGTAQGMQVAGGMPQAQHMPQSEHMADELLKACGGGGAPGGVPATAKPKNSRRVQRVDISQLAGTSVNPIPSVSVPSWSPQVNFTKKEGQHICPGCGRGFNNIGNMKLHYKIIHEKVKDFACRFCPKRFSKAQILRHHEWIHTGEKPFECKICGKHFRQETALKKHIKTHDKPNRRHYPERVQESPTFHKIEPREIDRDREPRNYDQYQDPAAERAAATAELLAHQIEENEAKRKADIERRKIQEAACEQLNKLQKQQEIEKATQSYDGYYAQKAQAEGISVDALKIDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01570408;
- 90% Identity
- -
- 80% Identity
- -