Dtri000771.1
Basic Information
- Insect
- Drosophila tripunctata
- Gene Symbol
- -
- Assembly
- GCA_035047385.1
- Location
- JAWNPS010000017.1:924066-930190[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.042 2.8 8.6 0.3 1 23 1381 1404 1381 1404 0.95 2 12 0.00016 0.011 16.3 2.7 2 23 1566 1587 1565 1587 0.97 3 12 7.3e-05 0.0049 17.3 0.2 3 23 1595 1615 1593 1615 0.98 4 12 6.1e-07 4.1e-05 23.8 4.1 2 23 1622 1643 1621 1643 0.97 5 12 5.7 3.9e+02 1.9 0.4 5 23 1656 1674 1654 1674 0.96 6 12 1.4 97 3.8 5.4 3 23 1681 1702 1679 1702 0.93 7 12 0.15 10 6.9 0.2 2 23 1713 1733 1712 1733 0.96 8 12 5.8e-05 0.0039 17.6 0.4 1 19 1739 1757 1739 1761 0.95 9 12 1.7e-05 0.0011 19.3 0.5 1 23 1769 1791 1769 1791 0.98 10 12 0.00011 0.0074 16.8 7.6 1 23 1797 1819 1797 1820 0.96 11 12 0.00021 0.014 15.8 5.9 1 23 1825 1847 1825 1847 0.98 12 12 0.03 2 9.1 8.2 1 23 1853 1875 1853 1876 0.95
Sequence Information
- Coding Sequence
- atgGCCGACAGTGTGCAGTGCCCCGTGTGCACCTTGTACCTGCATGCGGGTATGAATCTCTCAGATCATTTGGAGACACATCCCAAGGAACAAGTCATCAAGGCACTGGTGCAAATGACAATCGTTAGCAACAATGCAATGGGCGGTGCCCTGGCAGCCATTGCGCTCTCCACTGCCAACAGTGGTGCATCATCCATCATCATCAACGTCGTCAGATggcgcctcctcctcctcctcctcctccacaacagcagcaacagcaacagcaacatagcAGTTGCTGATGGTGATGTGAAACCAGCTATTACAGTGGTATCAACAGCCGCAACAgtagcaccaccaccaccaccaacacctccaccagcagcaacatcaacaagcacatttaaaataacagcagcaaaggctgcaacaaataacaacagcaacagcaacagtagcaacagtaacaataataaattgagCAATCCACCGATTAAGGCAGTTAAAAGCGCGCCACCCTCGACTGAGGCGTCAGCCACCACATCCAATACACCCACCATAAGCAGCGTGGCCGCTGTTTATCCTCCATCGTTGACATCCGACTACCGCTAtgatcagcaacagcagcagcagcagcagcagacgacgTCAACGGCAACGCTTCATAGCTTTGCGCGTGGTGCAACCACAATGCTGGTAATACCACAAGCCCAACCACCAGCacaagcacagcagcaacagcagcagcagcatcatttTCTGGCCACACAACAGTCTGCACATTttgcccaacagcagcaacaccagcagcagcagcaacagtcgcctatgaaatttacatatgcaacaacaacattgcctccaccaccgccgccgctgcAGctatttgcaCAGCAGCCAACAACATCACAGTCGCATCAGAAGCCACCGCCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCATAACCAAaataagcaacagcaacaacaacaacaacaacaacagcaacagcaacaaccgcaacagcaacagcaacatataAGCGTACAACACAATGTTAACCTAACACCACCGAGTGGGAAGCATAGCAAAGCCCATACGGATATATTTCTAAATCCACCGCCTCCACCACCGCCACAGTCCGCGTTGCCCACATCCGCCTGCTCCACAACGCGattgcagcatcagcatcagctgGCTATTACAactggtggcagcagcaacaacaacagcagcagctatgcTACAGCCAATTGCTCCAGCTCCTCCAGTTCCTCATCCATTCAGTTGTCAGTCGCAAATGGCAGAGTTGCCAACAGTCGCCAATCGACCAATTCGCCATTTGGTGCACTGCTCAATGCGGCGGCACAGGCTGCCAGTTCATCGCCAGCCTCCAACTCTGTATCCGTGTCCGCTTCCAGTGCATCGGTGCTGCGTTATGCCGAATCTCCGGTTGCTCATTATCTGGAGCGGGAGAATGGTGACTTTATTGTGCAAGAAACACCCAAACACATTGTGGAGTGCGTCGAGAAGGAGGATGGCGAATTCTCAGTGATTGAGCGCATCTATCAGTCGCCACCGAGCGTGTTGCACATACACGATgacgacgaagacgacgacgaggaGGAGCACAGATGGGTTAATAGCGACGATGAGGATCACGTTAAGGTGCACAACAGTGTGGAGGATGGCGATGATGAGCGAGAGGATAGTCGTAGTAGAGTTTGCCTTAAGACGACAACGAAAAAGTCGCGTAGGACAAAATCCAGTGGGAGAATGCAGAAACGTTCCGCAAAGCATCAAATTGTAACCAGCGATGATGAGGAAGAGTTCATGAGTGTGGGCAGCAGTGAGAACGAGGAACAGGCGGAGGATGAACAACCGCTtgcagcggctgctgctgcagctgcggcggcggcggcggctgctTTGGCTGCAACTGCCTCGACGGGCAGTGTCAATTCCTCTacgtccagcagcagcagcagcagcagcagcagcaacaaatccAAAAAGAATCGTGTTACAGTATTGAGTGATGTGCCACTCAATATGAATGAGTATTTGGATTTGGTGGGCAATATTGTGGCATCAAGTCGCATTGGTGCAACACGTCCGTTTGCTGCTGTGGCGCCCATTCCGTTGGTCAAGGTGGAAAAAGAAGAACCACTCGACGAATACGACAGTGTGCAGTCCGAGACGCTGTCCATGGAACAAAGGTCTAGCATTGAGCATGCCAGTGGCAGTAATGGACACGTCACCACCAGTGTCATACGCATggccagcaccagcaccagcagcagtgcCAATGTTCCAGTTGAGGATCTCACACAGCCACCACCAATGAAAGTGGAAGTGGAGCCAACGATGCTGTTGCCACAACGCTTCTCGGCGCCAGCACAGCAGCGTGGACCCAAGAAATTAGTCATCAAACCaaaggcaacggcaacggcaaccacgacgacgacgacgacgaaaaAGACTGATAACAACAATTCTGCCAGcggtagaagcagcagcaactgcactGAATCTCTCAGCATATCAAAAGCATCCGCAGAGTTGGTGCAGATCAAGTGCGAAAATGTGGAACCTCCGTCTAACTCGGGCACATCGACACCAACACATGGCAGCATTCTGGAGAAGCATCTAATGACCAGCAGCTACAcgaatcaacaacaaacacgcAAACACTCCACAGTCAACGATGATGATGCTCGAGTGCTGCTTGAGTTTGCCAACTCGAAGCAGTTGCCAAGCACATCTGGAGGCAGCAATTCCACCACATTTGTGGTAAATGCGGCCAGTTTTGCATCGGCAGGTTCCGTATTTgcaagcggcagcagcagtagcagtagcagcaccagcaacagcagcagcagtggcatgcaacaaaagTCCAGTAAACCCGGTGACGAATACATTCTGCCCGACGATAGTAAAGTGGAAATTGATGTGGATGCGGATGcagatgtggatgtggatgaaATTGTGATATCCTCCTCGTCTTCCTTTGCCTCAACCACGCAGCACGCAGCGAcagcgcaacagcagcagcaacatgcaacattgCCGTTGCAGCAAGTACAGCCGCCTAACTTTAAtgactttaactttttataccaccaaaatacaacagcagcagcagcagcagcaacagcagcaaccacaacatcGACGTCAGCGACGACTTCCAATTTTGGTGCATTCggtttgcagcagcagcaacaacatcagcagcatcgACATGGTTCTAGCGAAGCCACCAATGCCGCCACGCTCGCTTCATCCTCCAGCAACTCGTCAGTCTTGGACCATGACTCGTCCATGAATGCAACATTCCGTGTGGCAAAGACACAGGTAACAATCAATGGCTggtatcagcagcagcagcagcagcagcagcaacaagagcaggagcaacagccacagccatCCACCTCACAGAGTGTGGAGCAGTCAAGCAACTTTATTGCGGCACTGGCAGCTGTGGACTGTAGTGGAGCATTGGATAGCGATGCGAGTGATGCCAAGTATTTGGATCTGGATACCTGTAAGCGGGAACAGTTGAGCAACAGTGGCAGCCATTTACCCTCTGCCTCGGCATCCACGTCCACAACATCGTCGtcatttgctgctgcagccacaGAGAGCAGTCTTGTTGGTGGTTTGGGTTTGAATATACGCACGGATGAGAAAATGCCAGCCAAGGGTGAAATATCCGAACAGGAGAGCAACTGCGACATTGAGAACTCCTGGAGTCAATCGATGTACGGAGACATATCACAACGTTACTTTAGAAGCCAATTTGCAGATGGTTACAACAATCAACAGCTGACTGATTGGCGACAGGACTATTATCCGGCGGAGGATCTCAGTGGTCAGCAGCGTGAGCACAAACGGTTTGATTTCAATGCGGTTGCCTCGGAGTATGCTCAGCCGGTTGAACTGGACGCTTCCTCAAGTTCGGCTAGAAGCAATCAAATGCTGGACATACAACCCACCACATcggcatcagcatcatcatcggcttcgacatcgacatcggcATTGCTGGCTGGACCACCAATAGCTTCGACGTCAAGAGCTGCCGCCGAAGCGGAGGCTGTTGCAGCCGCCTTGCAACGGAAACCCGCTCGTCGCAAGATCTACAAGTGTCCACACTGTGTGGCCATCTTTGAGAAGTTAAAGGATCGCAACGCTCACATGATTGAAGAGCACAACTATGTGCGACAGAATCGTCGACTCATCTGTTCCCAGACGTTGGTCAATGCTGCCAttcggcaacagcagcagcagcagcagcaacaacaacagctattGATGCAGCCAACAGGTGAAGCACTGCAAGAAGATTCCAAGGATGgtattgtgaaaattaagcAGGAACACTGCCAGGATAAACCCGATTCATCTGAGCAGCTGATGGATCAATTGGAGCTGCCAGATGTTAAAGATGCTGGCTTATTGGACGCCAACGATTCCAATGCAAGCGGACGTGAAGCGGATGTTAAACCATCAACCAATGTGACTGATGTGAAGCCAATTGCACCGTTGGCCATGACAACACCAGCTGCCAAATTGGCAGCAATTTATCGCATGCTCATCTCCTACAATGAATCGAAACTTGGACAGGATCAGCACAATCTCAGCGAATTGGAACAGAAGGCCATGGAGAAATCCATCTTCCTCTGCTACGTCTCCGAGTGCTTTACCTGTGGCAAGAAATTCTATCGCTGGAAGAACTTCTCACTGCATCTGAAGCGTCATCTTGGCTGGAAGGAGTTTGGCTGCTATGTCTGCGATAAGAAATTTGTGGTGCGCAGTGCCCTTGTCGAGCACATGCGCATGCACACTGGACAAACGCCACTGAAGTGCAAGATATGCGGCAAAAAGTTTAAGCGTTACTCCAACTTGACACAACATCGCAAGCGACACACCAAAATGACGGTGCGAAAGAAGGAATACGTGTGCCACTGTGGCGAGGTGTTGCCATCGAAGGCACGCTTCCTGTGGCATAAGGAGACGCATGACTTGAAGCCCAAATGCTGTCCATACTGTTGTGATCGCTTTGTGCACGCGAATTCATTGCGCCGACACATTCGACTGGCGCACTCGGATAAATTTGACTATGCCGAGCCCATGGAGTGTCCGATGTGCAAgcagatatttgccaaaacatCGATTAAGGCGCACATGGCGACACATTCAACGGATCCGCAATATGATTGCGCCATCTGCAACAAGAGCTTCTCCACCAAATGGAATCTCAAGATACATTCGTGGGTGCATGCGAATCGTACGGCCAAACCGTTTAAATGCGAATACTGTCCCAAGGCATTTGTGCGTGAGTTGGACTTTAAGAATCACATGAATGCGCACAAGCAAATCAAGCCGTACACGTGCGAATACTGCGGTTGCAAGTTCATACGCAAATACAACTATATGCGGCATCGGCGGGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAGTCATTCCATCGACATTACTATCTGATCGAGCATCGGCGTATTCATACCGGTGAGCGACCTTTCCACTGCACCATTTGTGGCAAGAGCTCCACCACAAAGACCAATCACAACAAGCATCTGAAGATCCATCATTCGCGTGATCCCTTCACCGTGGAGGTCTAA
- Protein Sequence
- MADSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVSNNAMGGALAAIALSTANSGASSIIINVVRWRLLLLLLLHNSSNSNSNIAVADGDVKPAITVVSTAATVAPPPPPTPPPAATSTSTFKITAAKAATNNNSNSNSSNSNNNKLSNPPIKAVKSAPPSTEASATTSNTPTISSVAAVYPPSLTSDYRYDQQQQQQQQQTTSTATLHSFARGATTMLVIPQAQPPAQAQQQQQQQHHFLATQQSAHFAQQQQHQQQQQQSPMKFTYATTTLPPPPPPLQLFAQQPTTSQSHQKPPPAYGAAISQIRSQHNQNKQQQQQQQQQQQQQQPQQQQQHISVQHNVNLTPPSGKHSKAHTDIFLNPPPPPPPQSALPTSACSTTRLQHQHQLAITTGGSSNNNSSSYATANCSSSSSSSSIQLSVANGRVANSRQSTNSPFGALLNAAAQAASSSPASNSVSVSASSASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDDDEEEHRWVNSDDEDHVKVHNSVEDGDDEREDSRSRVCLKTTTKKSRRTKSSGRMQKRSAKHQIVTSDDEEEFMSVGSSENEEQAEDEQPLAAAAAAAAAAAAAALAATASTGSVNSSTSSSSSSSSSSNKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGATRPFAAVAPIPLVKVEKEEPLDEYDSVQSETLSMEQRSSIEHASGSNGHVTTSVIRMASTSTSSSANVPVEDLTQPPPMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATATATTTTTTTKKTDNNNSASGRSSSNCTESLSISKASAELVQIKCENVEPPSNSGTSTPTHGSILEKHLMTSSYTNQQQTRKHSTVNDDDARVLLEFANSKQLPSTSGGSNSTTFVVNAASFASAGSVFASGSSSSSSSTSNSSSSGMQQKSSKPGDEYILPDDSKVEIDVDADADVDVDEIVISSSSSFASTTQHAATAQQQQQHATLPLQQVQPPNFNDFNFLYHQNTTAAAAAATAATTTSTSATTSNFGAFGLQQQQQHQQHRHGSSEATNAATLASSSSNSSVLDHDSSMNATFRVAKTQVTINGWYQQQQQQQQQQEQEQQPQPSTSQSVEQSSNFIAALAAVDCSGALDSDASDAKYLDLDTCKREQLSNSGSHLPSASASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRSQFADGYNNQQLTDWRQDYYPAEDLSGQQREHKRFDFNAVASEYAQPVELDASSSSARSNQMLDIQPTTSASASSSASTSTSALLAGPPIASTSRAAAEAEAVAAALQRKPARRKIYKCPHCVAIFEKLKDRNAHMIEEHNYVRQNRRLICSQTLVNAAIRQQQQQQQQQQQLLMQPTGEALQEDSKDGIVKIKQEHCQDKPDSSEQLMDQLELPDVKDAGLLDANDSNASGREADVKPSTNVTDVKPIAPLAMTTPAAKLAAIYRMLISYNESKLGQDQHNLSELEQKAMEKSIFLCYVSECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -