Basic Information

Insect: Drosophila tripunctata
Gene Symbol: -
Assembly: GCA_035047385.1
Location: JAWNPS010000199.1:110009-114745[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1.6e-05 0.0011 19.4 3.4 1 23 680 702 680 702 0.98

2 7 1.5e-05 0.001 19.5 0.2 1 23 708 730 708 730 0.99

3 7 2.3e-06 0.00016 22.0 0.9 1 23 736 758 736 758 0.98

4 7 2.3e-07 1.5e-05 25.2 2.8 1 23 764 786 764 786 0.99

5 7 4e-06 0.00027 21.3 0.8 1 23 792 814 792 814 0.98

6 7 0.016 1.1 9.9 0.5 1 16 820 835 820 839 0.89

7 7 0.00055 0.038 14.5 1.5 2 23 849 870 848 870 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1.6e-05	0.0011	19.4	3.4	1	23	680	702	680	702	0.98
2	7	1.5e-05	0.001	19.5	0.2	1	23	708	730	708	730	0.99
3	7	2.3e-06	0.00016	22.0	0.9	1	23	736	758	736	758	0.98
4	7	2.3e-07	1.5e-05	25.2	2.8	1	23	764	786	764	786	0.99
5	7	4e-06	0.00027	21.3	0.8	1	23	792	814	792	814	0.98
6	7	0.016	1.1	9.9	0.5	1	16	820	835	820	839	0.89
7	7	0.00055	0.038	14.5	1.5	2	23	849	870	848	870	0.97

Sequence Information

Coding Sequence: ATGGAAACTTCTGTTTTAACCGAATTTACAACTCATTTAGTGCAAACAAAGGAAACTATTCTATTTGCTTGTTCCGAAAGAGATCTGCTGTTTAACTCGGCCGCCTTGATGGAAGCCAATCAGTTGGTCTATGCGATCCATTTGAATAGTTCGTATACACTGAGGAGTGTTCTAACCCGTAAGAACTATGCAAGAACATCTGTGATTGTGGACACCAGCTGCGTTGGATCCTCTGGACTGCTAAAGGAAGCCTCTgccaataaatatttcaacaaaaccTATCAGTGGTTGCTGTGGGCTGAGGATCAAGATATTGAGACTTTGCTCCCAATGGAATTGGACTATGTGGGACCCAATGCCCAGTTGACCTACGTGAATAGAACACGGGAGGGTTACGAACTGTGGGACGTACATTCCAAGGGTCGTCAAGTGAAGGCTTCTTTGGAATTGCATTTGATAGCTGAATTTTTGCAGAGCAGCAGAGAACTTAATATAATCCAGAACATTTTTGAGCTGCAAAGCATCAAATTTCGGGATCAGTTCAATGGATTGCTGCTACGGGGAGCCAGTGTTATTGATCAAGAGGATATATTGACGAACCAACAGATTGAAAGTATATTAGCAAGGCCCACAAAGGATAGTGGAGTGGCGGCATTTAGTAAATATCATTACGAATTGCTAACTATGCTCAGGGAACGCTTTAACTTTACCGTTAACTTTCGAAACTCTCGGGGCTGGGCTGGTCGATTGGGTAACACCACCTTTCGACTGGGTTTACTGGGCATTATACAGCGAAATGAGGCAGATATAGCGGCCACTGGTGCCTTTAATCGAATCAATCGATTTGCCGAATTCGATACCGTTCATCAAAGTTGGAAATTCGATACGGCTTTCCTTTTCCGATTTACGCCCGATCTCGATACACACGGTAAAAGTGGAAACTTTCTAGCTCCGTTTAGTGGACAGGTCTGGTTCTTTACCTTGGCTACCTTAGTTTTGATCAACTTTATTTGGTTTCTACTCGAGTACATAAACAGACGATGGCATGGTCGTGCCCCCACGAAATCATCTTCAAATTGGTCGGAACGAACTCTGCACACCTTCGGCGCTGTCTGTCAGCAGGGCATGGAACCGATTCCAACCGATCTACCCTCTCGCTCTGTGGTCGTAACTATTTTCCTATTCTCCGTGGTAATGTACAACTATTACACCTCATCGGTGGTCGGAGGTTTGCTTAGTTCCTCAGATCAAGGACCAGCAACAGTTGATGAAATAACAGATAGTCCCTTGAAGCTCTCATTTGAAGATATTGGTTACTATAAGGTCCTATTTAGGGAAAGCAGCAGTTCTGTTGTGAGCCGACTTATTAAGAGGAAATTATCATCTTCAAGAGGTCCCGGTGAAATGGGCGTTTTTGGACACATAGAGGAAGCCATTCCGTATCTTAAGAGTGGAGGATTTGCATTCCACTGTGAGGTAGTAGACGCCTATCCCATTATAGCGGAAATCTTCGATGCCAATGAAATTTGTGATCTACGTGAAGTGTCCGGACTTATGGAAAAGGAAATTATGAATTGGATTGTGCATAAAAATAGTCAATATACCGAACTGTTTAAAACTGCaATGTGTAATGCTCGGGAAGCCGGTTTGGTGGAGAGACTTCTTCGACAGCGACAAATGAAGAAGCCAGCCTGTCAGTCCATGTACACTGTCTATCCAGTAACTATATCGGGCGTTACTTCGGCATTTTTCACATTGCTAAGTGGTTTTTTGGTTTCCCTGCTAACTTTGGGCGTGGAGCTTTTCACAGTCGACGAAGATGAAGCGAGTCCCTTTGAAAAATGCATTAAGCAAGAGACAATAGATGAACAAGACGAGGTTCATTTTAAAGCATGTAAATCGGATGAGCAAATGTTGGATTCAGATGAGCTTCATGTAAACGACAGTTTAATCAAAGAGGAAACTCGTTTGGTGGAATTTCAGCACGAAAGCACAGCAGAACCAGATGATTCCCAAATACCATTGAAAAAGAATAAATTTGAATGTGATATTTGCCATAAGACCTTCAATCGTCAAATGTTTTTAACCATACATAAGAGGATCCATACTGGAGAGCGTCCGTACAAATGTGCCGATTGCTCGAAAGATTTCATAAGTGAGGTAGCTCTATCGCGTCATATGATGTCACATTCGGATGAGCGTCCGTATCCCTGCCAGCAATGtccaaaagcatttaaattcaaagaCATGCTTAAGAAGCATATCAATCTTCATTCTGGTAAACGTTCGTTCCAGTGTCCCTATTGCACGTATTCATTTGTCCGCAAGGCTCATCTGACGAGTCACATTCAAACCCATACCGATGAAGGATTACACGAGTGTCCCCATTGCCCCATGACTTTTTCCCGCAAAGAACCTTTGGTGGATCACATTCGAATCCATACTGGCGAAAGACCCTTTAAGTGTCCCCATTGCCCCATGACTTTCTCCCTTAAGCAATCCCTGGGATTTCATATTCCCGAACATACGGGTGAATATCCCAAAAAATGTCCACACTGCGCTTTAAGTTACGGCAGCTTGAAAACTCTCAAGAGGCACATGCTCGTTCATGTCACGAGCACGGCGGAAACAGAAGACAACACGCTGAAATAa
Protein Sequence: METSVLTEFTTHLVQTKETILFACSERDLLFNSAALMEANQLVYAIHLNSSYTLRSVLTRKNYARTSVIVDTSCVGSSGLLKEASANKYFNKTYQWLLWAEDQDIETLLPMELDYVGPNAQLTYVNRTREGYELWDVHSKGRQVKASLELHLIAEFLQSSRELNIIQNIFELQSIKFRDQFNGLLLRGASVIDQEDILTNQQIESILARPTKDSGVAAFSKYHYELLTMLRERFNFTVNFRNSRGWAGRLGNTTFRLGLLGIIQRNEADIAATGAFNRINRFAEFDTVHQSWKFDTAFLFRFTPDLDTHGKSGNFLAPFSGQVWFFTLATLVLINFIWFLLEYINRRWHGRAPTKSSSNWSERTLHTFGAVCQQGMEPIPTDLPSRSVVVTIFLFSVVMYNYYTSSVVGGLLSSSDQGPATVDEITDSPLKLSFEDIGYYKVLFRESSSSVVSRLIKRKLSSSRGPGEMGVFGHIEEAIPYLKSGGFAFHCEVVDAYPIIAEIFDANEICDLREVSGLMEKEIMNWIVHKNSQYTELFKTAMCNAREAGLVERLLRQRQMKKPACQSMYTVYPVTISGVTSAFFTLLSGFLVSLLTLGVELFTVDEDEASPFEKCIKQETIDEQDEVHFKACKSDEQMLDSDELHVNDSLIKEETRLVEFQHESTAEPDDSQIPLKKNKFECDICHKTFNRQMFLTIHKRIHTGERPYKCADCSKDFISEVALSRHMMSHSDERPYPCQQCPKAFKFKDMLKKHINLHSGKRSFQCPYCTYSFVRKAHLTSHIQTHTDEGLHECPHCPMTFSRKEPLVDHIRIHTGERPFKCPHCPMTFSLKQSLGFHIPEHTGEYPKKCPHCALSYGSLKTLKRHMLVHVTSTAETEDNTLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -