Basic Information

Insect: Drosophila tripunctata
Gene Symbol: -
Assembly: GCA_035047385.1
Location: JAWNPS010000231.1:1144360-1147719[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0072 0.49 11.0 4.5 2 23 234 255 233 255 0.97

2 12 0.00084 0.057 14.0 2.7 1 23 261 286 261 286 0.95

3 12 0.00044 0.03 14.8 1.0 1 23 293 318 293 318 0.97

4 12 0.0019 0.13 12.9 3.1 1 23 326 348 326 348 0.96

5 12 9.9e-05 0.0067 16.9 1.0 3 23 357 377 355 377 0.98

6 12 0.00012 0.0081 16.6 0.1 1 23 383 405 383 405 0.98

7 12 0.12 8.3 7.2 7.4 1 23 411 434 411 434 0.98

8 12 7.5e-06 0.00051 20.4 4.3 1 23 440 462 440 462 0.97

9 12 0.00041 0.028 14.9 1.8 1 23 468 490 468 490 0.98

10 12 1.7e-05 0.0012 19.3 1.5 2 23 579 601 578 601 0.96

11 12 0.00042 0.028 14.9 4.7 1 23 607 629 607 629 0.96

12 12 4.2e-05 0.0029 18.0 5.3 1 23 635 657 635 657 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0072	0.49	11.0	4.5	2	23	234	255	233	255	0.97
2	12	0.00084	0.057	14.0	2.7	1	23	261	286	261	286	0.95
3	12	0.00044	0.03	14.8	1.0	1	23	293	318	293	318	0.97
4	12	0.0019	0.13	12.9	3.1	1	23	326	348	326	348	0.96
5	12	9.9e-05	0.0067	16.9	1.0	3	23	357	377	355	377	0.98
6	12	0.00012	0.0081	16.6	0.1	1	23	383	405	383	405	0.98
7	12	0.12	8.3	7.2	7.4	1	23	411	434	411	434	0.98
8	12	7.5e-06	0.00051	20.4	4.3	1	23	440	462	440	462	0.97
9	12	0.00041	0.028	14.9	1.8	1	23	468	490	468	490	0.98
10	12	1.7e-05	0.0012	19.3	1.5	2	23	579	601	578	601	0.96
11	12	0.00042	0.028	14.9	4.7	1	23	607	629	607	629	0.96
12	12	4.2e-05	0.0029	18.0	5.3	1	23	635	657	635	657	0.99

Sequence Information

Coding Sequence: ATGGACGAGGAATCGCCAGCCTCGATACACACACTGTGTCGCACTTGTTTAACCAAATTGCAGCACGAGCAGGCGtatgatttgtttattgtacCCGGACTGGCGaaaaagttgtgtgtgtgcacttcACTCTCCGTGGAACAGCAGGATGGATACCCTAGAAATCTGTGCACACTGTGCTACAGTCGCTTAAACGAGTTGCATGAGTTTCAGAAGCAGTGCGTCGACTCGgtagaaaagtttaaagaacTATTGTCCAGCAATTACTTTGTTATACGCGACATTCCGGACTCTGATCCGCCTTTGGATAGTGCAGCTGCacaggaggagcaggaggagcacATCAATTTTGATCCACTGTTGAGTACCAAAATTGAGGTAGACAATGAGGAGGATGTATTCAAAATGATTGAGCAGGCCGACAAAGAATCAGAGCCCGAGGAGGAAGAGGTGGAGGAGGATGTTGATAATCTGGCCGATGCATTCGATGATAGCGGCAGTGATTTTAATCAAGACGAGCAGGAGGACAGCAGCGAATTGGATGATGAAATGCCGCTGTCACGCTTGAGGAGCAGCAAGCGGGGCGCTGGCAAGAGCAAGCAGCAAGAGGGAGACGGCACTGAGAAATCGACTAAGTCCAAAGAGAAACCCAAGCGTAAACGCATTCCGGCTGCAGAGCGTCATCTCCACGAGACCATCGAGTGTCACATTTGCCAACAGAAGTTCCACAAAGCTAGCagGTATGAGGATCACATGAAACGCCACAGCGATCAGCTGCCGTATCAGTGTGAAGCCAAGGAATGCAAGCGAGGATTCACCACCACCACAGGACTCAAACATCACATGGAGCACGCGCACGCGGAACTCTGTAAACTGCACAAATGCACTGCCGAGGGCTGCACCGAAGCCTTTGCACAGACTCGGATGTTAACGAAGCATTTGCGAAAGGTGCATAATATAGCCAAGCCCGAGATACATCCCTGCTCCGACTGCGAGAAGGTGTTCCGTTGTCCCATGGCCCTGAAGAAGCACATGTATAATCATACGGGAGAGGAGCTGCCCTTTGGCTGCACCATTTGCCAGAAGAGGTTTAGGGTGAACACAGAGCTCCGAGATCATTTGCTGCGACATGCGGGCATACGTAACTTTGTGTGTCCGTATTGTGGAGTGGGCAGGACAACCAAACAGGAGCTGGACAAGCACATACTGACGCACACCAAGGAGAAGAAGTACAAATGTGATCAGTGTGATCACACATCGCACAACAAACAGTGCATGACGAAGCACATCAAGGTGGTGCACATGAATATACGCAACTATATGTGTCAGTATTGCCAAAAGTCCTTTGCCACCTCGTATCATCTGAAGAATCATGAGAAGCTGCACACACGTGACGATTGCTTCGAGTGCAAGATTTGCGGGCGAAAGTTTCTATTTGAGAGTCGTTTGACCAATCATCTAAAGACACATGCCAAGGGTGGCAGCAAGGCTGTGAAAGGCGTTAAGAATGCGGCGGGAGAGGATGGAGAGGAGGGTGTGGGATTGGATGAGGAGGCGGCCAAACAACTGGCGGATTCGATTAAACCACCCGCGCCCGTCAAACCCAAGCATCCCAATCGCATTGAAATTGTTGATATTTCACAACTTGCCGGCACTTCGGTGAATCCCATTCCATCGGTATCGGTGTCCTCGTGGTCACCACAGGAGGACTTCTCCAAGCACGAAGGGCAGCTCAGTTGTCCGGACTGTGGACGCTGTTTCAATCACATTGGCAACATGAAGCTGCACATTAAGGTGGTGCATGAGAAGATCAAGGACTATGCCTGTCGCTTCTGTCCCAAGCGTTTCAGTCGCTCCCAGTATTTGCGGCATCATGAGTACACGCATACGGGTGAGAAGCCCTATGAGTGcagcatttgccaaaaacacttTAGACATGATGCGACATTGAGAACCCATATGAAATCCCACAACAAAGTGCCCAAGGATCCACGGAATCCTAGATCACAGCTCAAGGATCATATGGAGCCGCGTCTACAATTGAATATGGAACCGACGGAAAACTATGCAGAATATCAGGATCCAGATGCTGAGAGGGAAGCGGCTACAGCTGAATTGGTGGCTCAACAGCTCAATCGGGACGAGAGCGATGGCAAGCCCAAGTGGGGGCTGGCCAAGGGCGAGGAGGAACAGGAGGCAGCACACGAGCAGCTGCAAAAGATACGCGCCACACAATTGGCCAGACTTACCTACAGTAAAGTTGAGTCGGGTGTTAGCAAAGACATTCACAACAATCACGTTTAA
Protein Sequence: MDEESPASIHTLCRTCLTKLQHEQAYDLFIVPGLAKKLCVCTSLSVEQQDGYPRNLCTLCYSRLNELHEFQKQCVDSVEKFKELLSSNYFVIRDIPDSDPPLDSAAAQEEQEEHINFDPLLSTKIEVDNEEDVFKMIEQADKESEPEEEEVEEDVDNLADAFDDSGSDFNQDEQEDSSELDDEMPLSRLRSSKRGAGKSKQQEGDGTEKSTKSKEKPKRKRIPAAERHLHETIECHICQQKFHKASRYEDHMKRHSDQLPYQCEAKECKRGFTTTTGLKHHMEHAHAELCKLHKCTAEGCTEAFAQTRMLTKHLRKVHNIAKPEIHPCSDCEKVFRCPMALKKHMYNHTGEELPFGCTICQKRFRVNTELRDHLLRHAGIRNFVCPYCGVGRTTKQELDKHILTHTKEKKYKCDQCDHTSHNKQCMTKHIKVVHMNIRNYMCQYCQKSFATSYHLKNHEKLHTRDDCFECKICGRKFLFESRLTNHLKTHAKGGSKAVKGVKNAAGEDGEEGVGLDEEAAKQLADSIKPPAPVKPKHPNRIEIVDISQLAGTSVNPIPSVSVSSWSPQEDFSKHEGQLSCPDCGRCFNHIGNMKLHIKVVHEKIKDYACRFCPKRFSRSQYLRHHEYTHTGEKPYECSICQKHFRHDATLRTHMKSHNKVPKDPRNPRSQLKDHMEPRLQLNMEPTENYAEYQDPDAEREAATAELVAQQLNRDESDGKPKWGLAKGEEEQEAAHEQLQKIRATQLARLTYSKVESGVSKDIHNNHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -