Basic Information

Insect: Drosophila tripunctata
Gene Symbol: -
Assembly: GCA_035047385.1
Location: JAWNPS010000325.1:273025-275007[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.011 0.78 10.4 0.4 1 23 107 130 107 130 0.95

2 14 0.1 6.8 7.4 1.9 1 20 137 156 137 158 0.92

3 14 0.097 6.6 7.5 0.5 1 23 167 190 167 190 0.91

4 14 7e-06 0.00047 20.5 2.2 1 23 211 233 211 233 0.97

5 14 5.9e-05 0.004 17.6 0.9 1 23 240 262 240 262 0.98

6 14 0.0009 0.061 13.9 0.1 2 21 289 308 288 309 0.93

7 14 0.0047 0.32 11.6 4.7 1 23 355 378 355 378 0.96

8 14 0.044 3 8.6 0.4 1 23 415 438 415 438 0.95

9 14 0.00041 0.028 14.9 3.5 1 23 464 487 464 487 0.97

10 14 5.8e-06 0.00039 20.8 0.1 1 23 512 534 512 534 0.95

11 14 2e-05 0.0013 19.1 2.9 1 23 540 562 540 562 0.99

12 14 9.7e-07 6.5e-05 23.2 2.0 1 23 568 590 568 590 0.98

13 14 2.5e-08 1.7e-06 28.2 2.4 1 23 596 618 596 618 0.99

14 14 0.00048 0.032 14.7 0.2 1 21 624 644 624 648 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.011	0.78	10.4	0.4	1	23	107	130	107	130	0.95
2	14	0.1	6.8	7.4	1.9	1	20	137	156	137	158	0.92
3	14	0.097	6.6	7.5	0.5	1	23	167	190	167	190	0.91
4	14	7e-06	0.00047	20.5	2.2	1	23	211	233	211	233	0.97
5	14	5.9e-05	0.004	17.6	0.9	1	23	240	262	240	262	0.98
6	14	0.0009	0.061	13.9	0.1	2	21	289	308	288	309	0.93
7	14	0.0047	0.32	11.6	4.7	1	23	355	378	355	378	0.96
8	14	0.044	3	8.6	0.4	1	23	415	438	415	438	0.95
9	14	0.00041	0.028	14.9	3.5	1	23	464	487	464	487	0.97
10	14	5.8e-06	0.00039	20.8	0.1	1	23	512	534	512	534	0.95
11	14	2e-05	0.0013	19.1	2.9	1	23	540	562	540	562	0.99
12	14	9.7e-07	6.5e-05	23.2	2.0	1	23	568	590	568	590	0.98
13	14	2.5e-08	1.7e-06	28.2	2.4	1	23	596	618	596	618	0.99
14	14	0.00048	0.032	14.7	0.2	1	21	624	644	624	648	0.92

Sequence Information

Coding Sequence: ATGATCTGCCACTCGCAGCACACAAAGATTGCGGATCTACGCACACATTTGCTGCAGCATCAGTTTGTGGTGGAGTTTGGTGAGCAGCGCACTCAACCAGAGAGCATATCACGGTTGCTGTATCCAGAGCTGGTGAAGCCGCTGGCTGAGCAGCAGTTGATTGAACGCATACAGCGGGATGTGGCCGAGGGTGTGGAGCTGGAACGATTTGTATCGATAACCAATGAGGCAGGCATTGAGCTGCGTCTGGACAGCAGTGAAACTGATACGGATTCGGACACAGCTGATGTGAaacggagcagcagcagcgggcgACAATATAACTGTGAACTGTgtcagctgcagctgccgcgTAAATATCAACTCTATGCCCATCAGCTGGAGCAGCACACGTGGCAGGAGGCAACACACATTTGTAGCCACTGTCAATCCAGATTCATTAGTGAACAACTGCTGGAGCATCACTATGGCACGCTCTGTGGCAATCCCCACAAACGTTTCCTCTGCCGCAAGTGTCCGTTACGCTTTCGCTGGCGCAACAATCTGCAGCTGCACACGGATGTGGCACACAACCAGGAGAGTCCAGCTGTTGCTGGAGAGCTGATGCTAACTATGCCAGCTGTGCCTAGCTACGACTGCAACGAGTGTAAGCGCAGCTTCAAAATGCAAAAGGATCTCACCCGGCACACACTGATGCATGCCAAGGACTCGAGTATATATCGTTGCCGCTGGTGTGCCCGCCGTTTCTATCGCCAGGCAAATCTCTTGCAGCACATTGAGCGGCATGGCATCAGTGCCGCCCAGCTGCCGTATGCCGAGTCTCTGCTCAATGCCAGTCGCCATCCGCATGGCCAGAAGTGCATCCAGTGCAAGGTTTGTGATCTACGCTTTCCCACAATCTCTGCACTGCGCTCCCACCTGTCCTCCACACCGCGGGGAAGTCATCATGAGATTGATTCAATGCTAAACTATTCCATCACCAATCAGCTGGGCTATGAGCTGCACTTGGATGACTCGGAAACGGATGAGGAGTGCAAGAAGCCAGCTGGCACTCCCAGCCACTACACCTGCAGCATGTGCCAGCTGCGCTGTGTGCGCAAGTACGAGCTGCATCAGCACCAGCAGGCCATGCATCGTCTGGAGCGCATAACCGAGGGCTGTGACCAGTGCATCTTCAAGAGCGTTTGTCCCGATCTCATTGCCTATCATCAGCGCGTGCAATGTGGCAATAAGGAGAAGCAATTCAAATGTGTCAGCTGCGGCTACAGGTTCATGTGGGAGTCCaatctgctgctgcacctGCAGTTGCAGCATCCCAGCAGTGCTGCTGGTCAGGAGGAAAGCTCAGCTGATACTCAAGCATTAACTGCAGCTGCGGAGGGTCAGATCTTCCAGTGCGGTCAGTGTCCGCGCAAATACAATCGCAAGGATCGTCTGACGGCCCATGTGAAGAAGTGTCATGCTCCAGGTGCTGGTGTCGGTGCAGTGACGAAAGCAGCGACGCCTTCCACTGTCGCCAAGCAGCAGAAGAGTTTCCTTTGCGCCTTTTGCGGCAAGGCAGTCAGCTCCTCCTCCAATCTCATCATACACATACGTCGCCACACCGGCGAGAAGCCCTTCAAGTGCGACTACTGCGACATGGCATTTCCTCGCTCCTCCGATCTCCAGTGCCACCGACGCACCCACACCGGCGAACGTCCGCATGTGTGCACTGTCTGCCAGAAGGGATTCGCCCGCTCCTacaagctgcagcagcacatGCGCATCCACAGTGGCGAACGGCCCTACAAGTGCACATATTGCGACAAGAGTTTCACCCAGTCCAACGATCTGACGCTTCACATCCGCCGTCACACCGGCGAGCGACCCTATCAGTGTGATACGTGTGGGGAACGCTTCATCCAGGGCACAGCACTCAAGAATCATCGCATACAGAGTGGACATTATCACGAGGCAGTCGATAGTTTAACTAAGGATAATTAA
Protein Sequence: MICHSQHTKIADLRTHLLQHQFVVEFGEQRTQPESISRLLYPELVKPLAEQQLIERIQRDVAEGVELERFVSITNEAGIELRLDSSETDTDSDTADVKRSSSSGRQYNCELCQLQLPRKYQLYAHQLEQHTWQEATHICSHCQSRFISEQLLEHHYGTLCGNPHKRFLCRKCPLRFRWRNNLQLHTDVAHNQESPAVAGELMLTMPAVPSYDCNECKRSFKMQKDLTRHTLMHAKDSSIYRCRWCARRFYRQANLLQHIERHGISAAQLPYAESLLNASRHPHGQKCIQCKVCDLRFPTISALRSHLSSTPRGSHHEIDSMLNYSITNQLGYELHLDDSETDEECKKPAGTPSHYTCSMCQLRCVRKYELHQHQQAMHRLERITEGCDQCIFKSVCPDLIAYHQRVQCGNKEKQFKCVSCGYRFMWESNLLLHLQLQHPSSAAGQEESSADTQALTAAAEGQIFQCGQCPRKYNRKDRLTAHVKKCHAPGAGVGAVTKAATPSTVAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCDTCGERFIQGTALKNHRIQSGHYHEAVDSLTKDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -