Dtri000803.1
Basic Information
- Insect
- Drosophila tripunctata
- Gene Symbol
- -
- Assembly
- GCA_035047385.1
- Location
- JAWNPS010000019.1:200754-202352[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-16 2.4e-13 49.6 0.0 2 45 362 405 361 405 0.95 2 3 0.033 56 3.6 0.0 27 37 434 444 430 449 0.89 3 3 1.5e-20 2.6e-17 62.3 0.0 2 42 471 511 470 513 0.96
Sequence Information
- Coding Sequence
- ATGGGTCACTCGTCCACAATAATGGACATTCAGCGTATTCTGCTCGGCCAGCAGAGCAACAATCAAAGCTGCGAAGTGATGCTGGTGGCCAAGGATGGAATCAGTGTGCGAGCCCATCTGTTTGTGCTTAGCACCTGCAGTGATCTGATGCGTAATGTGCTGGTGGATCTGCCCGTGGGACAGGAGGCTACAGTTATACTGCCAGATATACGCGGTGAGCTGCTGGAGAGCATGTTATCCTTTATATACATGGGCGAAACGAGTTTGCCTTCGGCGCTGCTCACTGAGTTTTTGGAAGCCATCAATCTGCTGGGCATCAAGTCTGCCATTAGCTTTGAAACGAATCCCACAGCCACCAATGTGGTGAGTGGCGCCATGGCTGTGGAGGCGGCCAAGTCCATTAGTGGTCTGCACATTGCCAACACGGCCTTGATGGatgaggaggaagaggaggaggcaGCCAATGTGGTAGTGGGTAAGCTAGATGTGGCAAGTACAGTGCTCACTGATCCACAGCAGAGCCAGCAGCAGGATGGACAGAGATCCTTGGAGTTTCTTGATGTGTACAGTGATCAGCCAAAGATTACGTATTCCATTGAGCACATGGGCGGCACAACGAGTGGCAATCAATATATCCTTACAGAGAACACGGGCACCTTTACCATCACTCAGTCCGCTGGAGCGGTAAACAAGCTGGGCACCACTGTGGTGGACTCCGTTAGCGCAGCTGAGCTGGCAGTGGATGAGGCTGATGGAGAGGCGGAGGTAACGGATCACGAGGAGTCCGAGTCTCACTTAATCGAGGAGGAATATGTGCAATCCTCTGGTCCACTCATAGAAATGACTGCAGATGCTGAAGTTGAGGATGAACCAGCCGACGAGGAGGAAAATGAGGACTTTCTGGATGTGAAGCCACGCAAATCTCAGCTGGATATGAAAATCTTAAGAACCAAAGCGCagacccaacaacaacaacattctcCACGCACTCCAGTCTCCTCCGCCACAAAGGCTTCGAAGAAAACAATGACcaaacagcatcaacagtatGCGGCATTGAAAAAGGAGTTCAAGGATGACATCAATGATGCCCTCGATCTGGCAGCCGAGGCAGTGCTCCACGAGGGACTCAGTCTGCAGAAGGCAGCCGATCGCTTTGACATCTCCAAGACAGTGCTGTGGCGACGTGTGCGCTCCAATCCGGCGTACATGCGAATCAAGCGAGAGAAACCCTCGCTCGCCGAGGCCTATGAGCGTTTGAAGAACGGCGATTCACTGAAGAGCATCAGCCAGGATCTAAGCATACCCATGTCCACGTTACACCGCCACAAAGTGCGCCTCGCCGCCCAGGGACGTCTGCCCGAGTTCGTGGCCTGCCGGCGCAGGGATAGCACGCCCAAGGACGAGCTGCGGGATAAGTTGGCCAAGGCGGTGCACGCCTGCATCAATGGGGGAATGTCACAGAATCATGCGGCGAATCTATTTGAAATCCCCAAGAGCACACTGTGGCGCCATCTGCAGCGGCGTGTCACCGAAGCTGAGCGCAAGGTCAAGGAGGAGCATGAAGAGGAGGAAGATGATGAAGATGTTCTTAACTAA
- Protein Sequence
- MGHSSTIMDIQRILLGQQSNNQSCEVMLVAKDGISVRAHLFVLSTCSDLMRNVLVDLPVGQEATVILPDIRGELLESMLSFIYMGETSLPSALLTEFLEAINLLGIKSAISFETNPTATNVVSGAMAVEAAKSISGLHIANTALMDEEEEEEAANVVVGKLDVASTVLTDPQQSQQQDGQRSLEFLDVYSDQPKITYSIEHMGGTTSGNQYILTENTGTFTITQSAGAVNKLGTTVVDSVSAAELAVDEADGEAEVTDHEESESHLIEEEYVQSSGPLIEMTADAEVEDEPADEEENEDFLDVKPRKSQLDMKILRTKAQTQQQQHSPRTPVSSATKASKKTMTKQHQQYAALKKEFKDDINDALDLAAEAVLHEGLSLQKAADRFDISKTVLWRRVRSNPAYMRIKREKPSLAEAYERLKNGDSLKSISQDLSIPMSTLHRHKVRLAAQGRLPEFVACRRRDSTPKDELRDKLAKAVHACINGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEHEEEEDDEDVLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610763;
- 90% Identity
- iTF_00610763;
- 80% Identity
- iTF_00610763;