Basic Information

Gene Symbol
grh
Assembly
GCA_035047385.1
Location
JAWNPS010000288.1:3809857-3839486[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.8e+04 -5.3 8.6 80 116 164 204 127 241 0.49
2 3 0.26 2.4e+03 -2.4 1.8 91 109 454 472 431 487 0.50
3 3 2.5e-63 2.4e-59 200.4 0.6 24 221 599 791 585 793 0.93

Sequence Information

Coding Sequence
ATGCAGGATGCAACAAGCAGCTATGCCATATCCTATACAGACTGGATAACTGAGTCACGTCGCTACAGCCTGGAAGCAGAGCAGACACCAGCGCTACTTCATCATgatcagcagcatcatcatcattactATGAGACAACCAAGGACGTCTTGCAGCACCTGCCACAAACTGCTGCAGGCCTGCCTACAACAGCTCCAACGTCTgctcctctgctgctgcctgctgcacCTACAGCGGAGACTGCAGCGCCAATCTATGCGGTTTATAGCTACTACAGAAacgatcagcagcagcagcagcagcaggaggggAGCAGGAGCACGCACAGCCTCATCATCTGCAGCAGTGGAGGTAAcaatggcagcaacGGCGGCAAACTAAATGGTCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaagGCTTTCTGCTTGGTTCACACCCCTCATCGTCGGCGGCCACAACCGGCGTTGtctccacaacaacaatttcaaatcagcagcagcagcaacaacagcagcaacagcagcaacatcagcaacaacaacaacagcatcagcaacaacaacaacaacatccaaaCGACATTGTTACCATCACCACAGCGGGTGTGGGGAGTGTAGTCTCCGCTGtcgtgcaacagcaacaacaacaacagcagcagcagcagctgctgagcATCAAACGAGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCGGCAGCATTGTTAGTGCAGCTAACGGCGGTGGCACGGTGATAACGCAAAAGATATCGCGCGTGGATGCCACCAGAAGTGAGGCAGAATTAAGCGTTTatacagcagctgccacaacagaagcagcagccgcagcagcagcggaagcAGCAACACTAgacactgccactgccactgcaactgcaactagtCCCGCCAGTTCCACAGCAGTTCTAGCAATGTATGCTACCACGGGCGGCACACAGATTTATCTACagACCTCACACCAGAGCAGCAGTGGCGCCACAGCACAGCAGAGCTCGCTGCAGGCGCAGAGTCCCAGTCCGGGTCCGTATATCACAACCGATAGCTATGGCATGTATACGGCTACCCGACTGCCGCCCGGTCCCCCGCCCACCACCACCTTCATAACGGAGCCCTATTATCGCGAATACTTTGCGCCCGATGGCCAGGGCGGTTATGTGCCCGCCGGATCCGCTGCACGTAGTCTCTACGGCGAAGATGTCTCGGTTTCGGCAGCGACGCAGGCTCAACCCGTTGGCGGCACGTTGTATGAGGCACGTTTTAGCAGCAATGGGCCAACAACCACTACAGTGCTAACCAGCAGCAATgcacaccagcaacaacaacagcagcagcagcagcaacatcagcaacagcaacaacaacatcaccaacaacagcagcagcagcaggaacaatCGGGTAAAAACGGTGGTACGCCATTGTATGCCAAGGCCATAACAGCAGCGGGTCTAACGGTGGATCTGCCGAGTCCCGATTCGGGCATTGGCACAGATGCCATAACACCGCGGGATCAGAATCACATACAGCAGTCCTTCGACTATACGGAACTCTGCCAGCCGGGCACCCTAATCGATGCCAATGGCAGCATACCCGTCTCGGTGAACAGCATCCAGCAGCGCACAGTGGTGCACGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGATACCAGCACAAATGGTTCCACACGCTCGAGGCCCTGGCACGATTTCGGCCGTCAAAACGATGCtgataaaattcaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATAATCTGGAGAGCCCCATTAGCTCGTCCCAGCGACGTGAGGACGATCGCATCACCTACATCAATAAGGGGCAGTTCTATGGCATCACCTTGGAGTATGTGCACGATGCGGAAAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGACACCAAGAACTCGGTTGGTCTCGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTATTGGAATCCACTTGAAAGCTCTGCCAAGATCAACATTGCCGTACAGTGTCTCAGCACGGATTTCAGCAGTCAAAAAGGCGTCAAGGGTCTGCCGTTGCACGTACAAATCGATACGTTCGAGGATCCGCGAGATGCGACGGTCTTCCATCGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGTGCGGAGCGGAAGACACGCGATGAGGAGAGACGTGCGGCAAAGCGCAAGATGACGGCAACTGGACGCAAGAAGTTGGATGAGCTATATCATCCGGTGACGGATCGGTCCGAGTTCTATGGCATGCAGGATATGGCCAAGCCGCCGGTGCTTTTCTCGCCCGCCGAGGATATGGAGaagAGCTTCTACGGCCACGAGACTGACTCGCCGGAACTGAAAGGCGCCTCTCCATTCTTGTTGCACGGCCAAAAggttgccacgcccacgctcAAGTTTCACAATCACTTTCCGCCCGACATGCAGACtgACAAGAAGGATCATATATTGGATCAGAGTATGTTAACCAGCACACCGATGTCCGAATTTGGGCCACCAATGAAGCGGGGACGTATGACGCCACCAACCACGGAGCGTGTCATGCTGTACGTGCGGCAGGAGAACGAAGAGGTCTACACGCCCCTGCATGTGGTGCCGCCCACCACAATTGGTCTGCTGAATGCGattgaaaacaaatacaaaatctCAACAACGagcataaataacatttatcgCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTTTACTGCAACGAGGACATTTTCTTGCTGGAGGTGCAACAAATTGAGGATGATCTGTACGATGTAACGCTCACGGAGCTGGCCAATCAGTAG
Protein Sequence
MQDATSSYAISYTDWITESRRYSLEAEQTPALLHHDQQHHHHYYETTKDVLQHLPQTAAGLPTTAPTSAPLLLPAAPTAETAAPIYAVYSYYRNDQQQQQQQEGSRSTHSLIICSSGGNNGSNGGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQQQQQQQQQQQHQQQQQQHQQQQQQHPNDIVTITTAGVGSVVSAVVQQQQQQQQQQQLLSIKREPEDLSKDPKNGGSIVSAANGGGTVITQKISRVDATRSEAELSVYTAAATTEAAAAAAAEAATLDTATATATATSPASSTAVLAMYATTGGTQIYLQTSHQSSSGATAQQSSLQAQSPSPGPYITTDSYGMYTATRLPPGPPPTTTFITEPYYREYFAPDGQGGYVPAGSAARSLYGEDVSVSAATQAQPVGGTLYEARFSSNGPTTTTVLTSSNAHQQQQQQQQQQHQQQQQQHHQQQQQQQEQSGKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDMAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSEFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELANQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
-
80% Identity
-