Basic Information

Insect: Drosophila trichaetosa
Gene Symbol: salm_2
Assembly: GCA_035043205.1
Location: JAWNNE010000624.1:1351713-1362869[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.2e-06 0.00035 20.9 0.9 1 23 524 546 524 546 0.98

2 7 1e-05 0.00069 19.9 2.1 1 23 552 574 552 574 0.98

3 7 0.018 1.2 9.8 1.5 2 23 988 1009 987 1009 0.98

4 7 7.4e-08 4.9e-06 26.7 0.5 1 23 1015 1037 1015 1037 0.98

5 7 0.00023 0.015 15.7 2.3 1 23 1047 1069 1047 1069 0.98

6 7 0.03 2 9.0 2.9 2 23 1485 1506 1484 1506 0.97

7 7 2.9e-08 1.9e-06 28.0 1.3 1 23 1512 1534 1512 1534 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.2e-06	0.00035	20.9	0.9	1	23	524	546	524	546	0.98
2	7	1e-05	0.00069	19.9	2.1	1	23	552	574	552	574	0.98
3	7	0.018	1.2	9.8	1.5	2	23	988	1009	987	1009	0.98
4	7	7.4e-08	4.9e-06	26.7	0.5	1	23	1015	1037	1015	1037	0.98
5	7	0.00023	0.015	15.7	2.3	1	23	1047	1069	1047	1069	0.98
6	7	0.03	2	9.0	2.9	2	23	1485	1506	1484	1506	0.97
7	7	2.9e-08	1.9e-06	28.0	1.3	1	23	1512	1534	1512	1534	0.99

Sequence Information

Coding Sequence: ATGAAAAATCACCTGCAAAACGTTCTGTGTGCAATGCGTAGTGACTTCAAGGATAATCACCAGGagaccataaataaaatgatacaATTTGGTACCGTTAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCCAGAAGCGCCGAAAAAGACATCGCAAGTGATCAGGAAGATAATGGCGCCTGCTCGCCGCTGACAACGGCGACACCGGCCAGCGCCAGTGCTGGGAACAGCCCCTGCCCCAGCCGCAGTCCGCGGCAccacagcgacgacgacgacgagttGGCTGGCGAAAGGGATTTACTGCAAGTTGCCGATAATAAGGAGGATACAAAGGATAAACAGGATAAACAGGATAAGCCGGATAAGCTGAAGGAGAGCGTGGAGAGTGTGGAGCAAGTCGATAGCCGAACTGATGCGACTATCGAGGatcacaatcacaacaacagcagcagcaacaaccacaacaataacaacgatagcgataacgataacgataacgatagcAACAAAGTCAAGGTCATGACAAAACCGCCCGAGGAACACGAGACGAACGCGAACGCGAACTCAAACTCATCGTTGCCGAATTCACCCACCGCCGCCACATCCAGCATGGAGGCGCCACCAAAGCaaatggatgtggatgtggagaTGACGCAGGCGGAGCACGAGAAGAGTCCAGCCACGCCGCCGCCGGTcagcaatgcaacagcagcaacagccacagcagcagcagccgctgcagccgcCCAACAATTTGGGGCAACACCCGTCACCCTAGAGGCGATTCAAAATATGCAGATGGCAATCGCCCAGTTTGCGGCCAAGACAATTGCGAATGGCGCCTCAGGTGCGGACAACGAGGCGGCCATGAAGCAGTTGGCCTTCCTCCAGCAAACGCTCTtcaatctgcagcagcagcaactctttCAGATTCAGCTcatccagcagctgcaatcgCAGCTGGCGCTCAACCAGGTCAAGCACAGCAACGAGGACGACGCTGACGAGGATGCGGAGCCCGAGGAGCGGGAGGATGGCGAAACGGACACctatgaggaggaggagcgcaTTGCCGACATGGAGTTGCGACTGAAGGCCGAGGCTCGCATGGCCGAGTCCAAGGCGCGCCAGCATCTCATTAATGCGGGAGTTCCGCTTCGCGAACGTTCCCATTCTCGTTCCcattcccgttcccgttccgcCTCCCCATCGCCCAGCCCCTCGTCGCCAGCTGTCTCTTTGAAGCGCAAGCGGGACGAAGATGCCGGCGCCAAGTCTGCTGGTGCCAGGAGCTTTGGCCAGCCGGTGGAGAGCGCACAGGATGCGCTGTCCAAGCTAAAGGAGATGGAGAATATGCCGCTGCCCTTTGGCAACGATTTGGCATCCAGCATCATAACGCATCACGATGATCTGCCCGAGCCGAACTCCCTGGATTTGCTACAGAAACGGGCGCAGGAGGTGCTCGATTCGGCCTCGCAGGGCATCCTGGCCAACAACATGGCCGATGACTTTGCATTCGGGGACAAGTGCGGCGAGGGCAAGGGACGCAATGAGCCATTCTTCAAGCATCGCTGCCGGTATTGCGGCAAGGTCTTTGGCTCCGATTCGGCGCTGCAGATCCACATCCGATCTCATACGGGGGAGCGACCCTTCAAGTGCAACGTCTGCGGCAGTCGGTTCACCACCAAGGGCAACCTGAAGGTACACTTCCAGCGCCACGCCCAGAAGTTTCCACATGTGCCGATGAATGCGACACCGATACCCGAGCACATGGACAAGTTTCATCCGCCGCTGTTGGATCAAATGTCGCCGGACAGTTCGCCCACCCAATCGCCAGCGCCGGCATCCGGCCAGGCGCCGGCCAGCTCAACGTCCGCTCATCCGCCAGCGATGTCCTTCCCCGGCCTGCAGGGTCTCTATCGTCCGCCCATGGAGCTGCTGAAGTCCCTGGGAGCAGCGGCTGGCAGCACGGCCGGACTGCCGCATCCCTTTCTCCCTCAAATGCCGGGACTGGGCGCGGCTCTCAGacacagccagcaacagcagcaacagcagcaacagcagcaacagcaacagcagcagcaggttaGTCAGGATTTGCCAACAGATTTGCGCAAGTCTTCTGGACCTAGTTCGCCACACGACGAGGAggaagatgatgatgacgatatGACTGCTGTGCGGCTGCCCGTCAAAGCGGAACTGCTCGAGGAGGAGAAGACGGAGCCGGAAACGGCAGCGACGTCTGCCGAATGCGCTGACTTGGAGCCAGAACCAGAGCCGCTGCCGCTGGAGGTGCGCATCAAGGAGGAACGCGTCgatgaggagcaggaggaggagcagcagcagcgagagcagcagcgggaacaacaagaaacatcCTCCAATCGCCGCACACCAACAGCTTCGCCCACGAACCCAGTGTCTGCGACTCCGCCACTAATGCAGCgacaccatcatcatcatcagcaccatcagcaccatcatcatcatcagcagcatcatcagcatcatcagcatcatcatcaacatcatcatcatgccTCCCACATGCCCGGCTATCCGCCAGTGGTGCAACCGATTCAACCACCAGCCATAATGCACGCCCAGTGCTCGCCCGGCTCCCATTCGCATCTGGATCAGCTGCCGACTCCTGGCCAATTGCCGCCAACGATGCCGCATCGCGAGGACTTCTTTGCCGAGCGATTCCCCCTCAACTTCACCACAAAGACACTTTCCCCCGAGCACCATTCGCCTATCCGTTCGCCAGCTGGCCATGCTCACGCCCACATTCCGCGCTCGCCCTTCTTCAATCCGATCAAGCATGAGATGGCGGCtctgctgccacgcccccacagcaacgacaactCGTGGGAGAACTTCATCGAGGTGTCGAACACATCAGAGACGATGAAGCTCAAGGAGCTGATGAAGAACAAGAAGATCAGCGATCCCAATCAGTGCGTCGTCTGCGATCGCGTCCTCTCCTGCAAGAGCGCCCTCCAGATGCACTATCGCACCCATACGGGCGAGCGGCCCTTCAAGTGTCGCATCTGCGGACGCGCCTTCACCACCAAGGGTAACCTGAAGACGCATATGGCTGTGCACAAGATTCGTCCGCCGATGCGCAACTTCCATCAGTGTCCCGTCTGCCACAAGAAGTACTCCAATGCGCTGGTGCTCCAGCAGCACATCCGGCTGCACACGGGCGAGCCAACGGATCTGACGCCCGAGCAGATTCAGGCCGCAGAGATACGTGATCCGCCGCCCTCCATGATGCCTGGTCACTTTATGAATCCCTTCGCGGCGGCTGCTTTCCATTTTGGTGCCATGCCTGGCGGGGGTCCGGGCAGCCATAATCCGGGCGCGGTAGCTGCTGGCATGTCGGGTGCGGCACACAATGGCGCCTTGGGCTCGGAATCGTCGCAGGGTGATCTCGACGACAACATGGACtgtggcgatggcgatgattTCGATGACGCCTCCTCCGATCATCTCTCCAATGATCCGGCGTTGGGCGACGAACGTCCGCGTTCCGGCGACGACTTCAAGTCGCTGCTCTTCGAGCAGAAGCTGCGCATCGATGCCACCGGCGTGGTCAATATCAATAGTCATCATCCGCAtccacattcgcattcgcattcacttCATCAGCATGCGCGTCCTCGTTCCGCGGCCAGCAATCCCAATTCAATTGGCTCCGCTTCCGCCTCGCCCTCCGCGCCCGCCAGTCCCAGCTCGCAGCCCAAGCCGAGCTGCTCGCCGGTGCGATCCGTCTCGGAGGCATCGCAGGGTGCGCTCGACTTGACGCCACGTGCCGTCGCTGCTGCCCCGTCGCAGCCGCTTGCCTCCCCGCCCAAGGAGAAGACGGTGAGTCCGCTCAGTCAGCAGTCGACGCCTGCACGCAGTCCCAatgcctccgcctccgcctctgcCTCCGTCGCTGCCTCGCAACTGCTCTCCTCGCAGCTGGCACCGTCTGTGGGCATTGATTGCCTGCCGCCCGGTTTACAGcatcatctgcagcagcagcatcagcatctgaTGCAGCAACAGGCGgcggtggcagctgcagcggctgccCAACACCATCACCATCAGATGCAGCAGCATGCGGCCGcactgcatcagcatcaggaGCAACTGCGTCGCGAAGCACAGGAAGTGCAACAGaaagcggcagctgctgcagcagcggctgctgcccAGCGTCAGACATCGCCACAGCCACCGACGCGTGCCGGCGAATCACCTGGCGGTCCGCCCATTGGTGGTCAGCCCAATCCGTTGATCGGCGCCCGGCCACCCTTCGGCCTGTTCCCCAATCTGCCCATCTTCCCGCCGGCCACCACGCAGAACATGTGCAATGCCATGAATCAGATTGCCCAATCGGTGATGCCAGCGGCACCATTCAATCCGCTGGCATTGAGCGGGGTGCGGGGCAGCACCACCTGCGGCATCTGCTACAAGACATTCCCCTGCCACTCGGCGCTCGAGATTCACTACAGGAGCCACACCAAGGAGCGCCCCTTCAAGTGCAACATCTGCGATCGCGGCTTCACAACTAAGgGCAACCTCAAGCAGCACATGCTGACACACAAGATCCGCGACATGGAGCAGGAGACCTTCAGGAATCGAGCTGTAAAGTATATGAACGAGTGGAGCGATGAACGCGAGTAA
Protein Sequence: MKNHLQNVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSAEKDIASDQEDNGACSPLTTATPASASAGNSPCPSRSPRHHSDDDDELAGERDLLQVADNKEDTKDKQDKQDKPDKLKESVESVEQVDSRTDATIEDHNHNNSSSNNHNNNNDSDNDNDNDSNKVKVMTKPPEEHETNANANSNSSLPNSPTAATSSMEAPPKQMDVDVEMTQAEHEKSPATPPPVSNATAATATAAAAAAAAQQFGATPVTLEAIQNMQMAIAQFAAKTIANGASGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQVKHSNEDDADEDAEPEEREDGETDTYEEEERIADMELRLKAEARMAESKARQHLINAGVPLRERSHSRSHSRSRSASPSPSPSSPAVSLKRKRDEDAGAKSAGARSFGQPVESAQDALSKLKEMENMPLPFGNDLASSIITHHDDLPEPNSLDLLQKRAQEVLDSASQGILANNMADDFAFGDKCGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTQSPAPASGQAPASSTSAHPPAMSFPGLQGLYRPPMELLKSLGAAAGSTAGLPHPFLPQMPGLGAALRHSQQQQQQQQQQQQQQQQQVSQDLPTDLRKSSGPSSPHDEEEDDDDDMTAVRLPVKAELLEEEKTEPETAATSAECADLEPEPEPLPLEVRIKEERVDEEQEEEQQQREQQREQQETSSNRRTPTASPTNPVSATPPLMQRHHHHHQHHQHHHHHQQHHQHHQHHHQHHHHASHMPGYPPVVQPIQPPAIMHAQCSPGSHSHLDQLPTPGQLPPTMPHREDFFAERFPLNFTTKTLSPEHHSPIRSPAGHAHAHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGAMPGGGPGSHNPGAVAAGMSGAAHNGALGSESSQGDLDDNMDCGDGDDFDDASSDHLSNDPALGDERPRSGDDFKSLLFEQKLRIDATGVVNINSHHPHPHSHSHSLHQHARPRSAASNPNSIGSASASPSAPASPSSQPKPSCSPVRSVSEASQGALDLTPRAVAAAPSQPLASPPKEKTVSPLSQQSTPARSPNASASASASVAASQLLSSQLAPSVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQMQQHAAALHQHQEQLRREAQEVQQKAAAAAAAAAAQRQTSPQPPTRAGESPGGPPIGGQPNPLIGARPPFGLFPNLPIFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNEWSDERE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00499142;
90% Identity: iTF_00528350;
80% Identity: -