Basic Information

Insect: Drosophila triauraria
Gene Symbol: -
Assembly: GCA_014170255.2
Location: CM024333.1:16197550-16201601[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.27 21 5.8 0.1 2 23 317 339 316 339 0.89

2 6 0.00054 0.042 14.3 0.9 1 23 350 373 350 373 0.92

3 6 0.00024 0.018 15.4 2.7 1 23 383 405 383 405 0.97

4 6 2.7e-06 0.00021 21.5 2.1 1 23 700 722 700 722 0.97

5 6 3.4e-06 0.00026 21.2 0.2 1 23 728 750 728 750 0.98

6 6 1.5e-05 0.0012 19.2 4.2 1 23 756 778 756 778 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.27	21	5.8	0.1	2	23	317	339	316	339	0.89
2	6	0.00054	0.042	14.3	0.9	1	23	350	373	350	373	0.92
3	6	0.00024	0.018	15.4	2.7	1	23	383	405	383	405	0.97
4	6	2.7e-06	0.00021	21.5	2.1	1	23	700	722	700	722	0.97
5	6	3.4e-06	0.00026	21.2	0.2	1	23	728	750	728	750	0.98
6	6	1.5e-05	0.0012	19.2	4.2	1	23	756	778	756	778	0.98

Sequence Information

Coding Sequence: ATGAGCGCCATGGCCGCCAGTCGCTGTCCCACCCCCTTCGCCTTTCCCTTCACGCCCCTCGGGCTGAGCCTCTTCGATATCGATCCGTCCAGAATCCTAAGCCTGCTGCATCATCAGACCTGGCTGGCAGAGGAGGCCCTCAGGACCCGTGGTCTCCTGGCAGCACCCAAGGACTTCCCACACCGCTTCACCACGCTCAGCGACCTGCTGACCAAGGACTACCAGCCGGGAGCGCCGACGGCCACCGCCACGGCCACGGCCACCACCGCCTCATCGTCCTCCTCCGCCGCCTCGAAGGACACGCAGGCACAGTACAAACAGCAGCAGCTGCAGCAGGGAGCGGCGGCGACCTTCAACCTGCGCTACCCCACGCCCACGGCCTTCTACCAGCAACAGCAGCAGGCGAAGGCGGCCAAGTCCTCGCCGTCGCCCCAGCAGATGGCCACCAGCACCAGCAGCTCCACCACCCACCACCACGCCATGTCCAACGACTCGGGCGAGGACAGCTGCAAGCGCAGCTCTGCGGACAGCGACGAGGTGACCATCGTGGAGCTGCCCAGCGAGCGCAGTGCCCAGCTGTACAAGGAGTCGCTGGAGCAGCTCCTGCAGCGTCAGCGTCGCACGCCCATCCTGGGCGGAGGAGGCCCCACCTCCAGTGGAAGCGTCATTGTGGACGCCACCGGCCTGAGGCAGTACACGCAGCTGCTGCTGGCCAGCGCCGGCAATCCGGATGCCGCCTGCAAGGAGAAGAGCTCCTCCTCGTCCACCTCGTCCACGCCGCCGCTGCTCAGCCAGCAGCAGCTCAGCCAGATGCTGAAGAGTCCCTCGGACACCTGTTCCTCGCTTTTCAGCTCCTCGGGGGGCGCTGGTTCCGGCTCCAACTCCGGGGTAATGGCACCAGGCACCAGCTCTGTGGGGGCCACCATGGAGACCATTGAGGAGGAGACCCGCTGCGTCGTGTGCAACGCCCACTTCCCGAATGTGTGGCTGCTGGAGCAGCATGCCGCCCTGCAGCATCCGCATGTGGGTCCCGGCGAGGAGAAGCCCTTCATCTGCGAGCAGTGCGGCCAGTCCTATCGCTATCGCAGCGCCTATGCCAAGCACAAGGAGCAGAACCATCGGGCCCGCCTCCCAGCGGACAAGCTCTTCACCTGCGACGTCTGCGGGATGCAGTTCCGCTACCTAAAGAGCTTCAAGAAGCATCGCCTGAACCATGCCCTGGAGCGCCTGCATGGCAAGAAGAGTGTGGGCGTCGGAGGAGGTGTCGGAGTGAGCGTCCGCCTGGGCTCCTCCATGCCCCTGCCCGTGGCAGCTCCTACTTCCGTCTCGGCTGCAGGTTCTGTGACCTCGGTGGACCAGGATGTGGTCACCAGCTCGCAGGAACCCATGCTGGCCGACGAGGGCGAGGATCTGCGGGTCAATGTCAAGCGGGAGGAGCAGCCGGAACAGCACTCGAGCGGCGGTGGCGGCGGGGCAGACGGCGAGGAGCATGAGCAGGACAACACCGTCGACTCCGCGGGCATCACGATGCTCTACCAGGACAACAACTCATCGGCCTCGGCCTCCACCAGCGCCACCGAGCCGAATATAAGCAGCTCCGATGGCATACATAGTACAAACAAGAGGTCGCGCATGCACCACTTGGAAACGGATCCCTCCTATTCGCATCAGCACCACCATCACCACCACCATCATCACCAGCAGCCGCCGCACCACCAACAGCAGCAGCCGCAGCACCATCCGCCGCACCACCTGGGCCACGTCTCACTGCCACTGGTGGCCACCTCGGCCGCTGGCTCCTCCTCCTCGGCGGCTGCCGCTGCTGTGGCCGCTGCCACCGCCGGAAGCAGCTCTGGCAATCCAGGAATAGGCACCGGAAGTTCCTCGGCCACCGGAAGCGGACCATCTGGAGGCTCTAGCTCGGGCGGCAGCGGCGGGGGCATTAGCTCTCTTAGCTCGCTGACCTCGCTGATCAACGCCGAGCGCATACCCAATGAGCAGTTTCTGGGTCTGAATCCGCAGGAGGCCTCCATACTCAACTTTTTGCGCGTGGATGCCGCCGAGCGTCAGAGGGATAAGAGGCCCGCCACCTCGCGCTTTGCCTGCCCCTTCTGCGGCAAGTGTGTGCGCTCCAAGGAGAACCTGAAGCTGCACGTGCGCAAGCACACCGGCGAGCGGCCCTTTGTGTGCCTCTTCTGCGGCCGGGCCTTCGGGGGCAAGTCGGATCTCACCCGCCACCTGAGGATCCACACCGGCGAGCGGCCGTACCACTGCGAGTCCTGCGGGAAGTGCTTCGCCAGGGCCGACTATCTGTCCAAGCACCTGACCACGCACATCCATAACGCGCCGCGCTGA
Protein Sequence: MSAMAASRCPTPFAFPFTPLGLSLFDIDPSRILSLLHHQTWLAEEALRTRGLLAAPKDFPHRFTTLSDLLTKDYQPGAPTATATATATTASSSSSAASKDTQAQYKQQQLQQGAAATFNLRYPTPTAFYQQQQQAKAAKSSPSPQQMATSTSSSTTHHHAMSNDSGEDSCKRSSADSDEVTIVELPSERSAQLYKESLEQLLQRQRRTPILGGGGPTSSGSVIVDATGLRQYTQLLLASAGNPDAACKEKSSSSSTSSTPPLLSQQQLSQMLKSPSDTCSSLFSSSGGAGSGSNSGVMAPGTSSVGATMETIEEETRCVVCNAHFPNVWLLEQHAALQHPHVGPGEEKPFICEQCGQSYRYRSAYAKHKEQNHRARLPADKLFTCDVCGMQFRYLKSFKKHRLNHALERLHGKKSVGVGGGVGVSVRLGSSMPLPVAAPTSVSAAGSVTSVDQDVVTSSQEPMLADEGEDLRVNVKREEQPEQHSSGGGGGADGEEHEQDNTVDSAGITMLYQDNNSSASASTSATEPNISSSDGIHSTNKRSRMHHLETDPSYSHQHHHHHHHHHQQPPHHQQQQPQHHPPHHLGHVSLPLVATSAAGSSSSAAAAAVAAATAGSSSGNPGIGTGSSSATGSGPSGGSSSGGSGGGISSLSSLTSLINAERIPNEQFLGLNPQEASILNFLRVDAAERQRDKRPATSRFACPFCGKCVRSKENLKLHVRKHTGERPFVCLFCGRAFGGKSDLTRHLRIHTGERPYHCESCGKCFARADYLSKHLTTHIHNAPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489658;
90% Identity: iTF_00483244; iTF_00480452; iTF_00531943; iTF_00606611; iTF_00572184;
80% Identity: -