Basic Information

Insect: Drosophila triauraria
Gene Symbol: -
Assembly: GCA_014170255.2
Location: CM024336.1:18380106-18383162[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 6.6e-05 0.0051 17.2 0.6 1 23 710 733 710 733 0.97

2 4 2.5e-07 2e-05 24.8 1.0 1 23 746 768 746 768 0.98

3 4 4.7e-08 3.6e-06 27.1 2.9 1 23 774 796 774 796 0.99

4 4 4e-05 0.0031 17.9 1.5 1 23 802 824 802 824 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	6.6e-05	0.0051	17.2	0.6	1	23	710	733	710	733	0.97
2	4	2.5e-07	2e-05	24.8	1.0	1	23	746	768	746	768	0.98
3	4	4.7e-08	3.6e-06	27.1	2.9	1	23	774	796	774	796	0.99
4	4	4e-05	0.0031	17.9	1.5	1	23	802	824	802	824	0.99

Sequence Information

Coding Sequence: ATGGCCGCCCGGTCTCGCCAGGTCTCTCGCAAGAACCCCTCGCCGCGCAAGCTGCAGGACTTGCTGGTGGAGTTGCCCTCGCCGAGCTCGTCCCAGCAGGAGGAGCAGCAGCTGCGTCCAACCATATCCCAAACCCAACCCGTTGGAGGCTCCGTTCCGAAGGAGACGCCGCCGCCGCTGCCGCTGAAGCCACAACAAGTTGACCTCATGACGATGGCAGAAGGCACCGACCCCATGGGGCATGGTCACCACACGAATCCGCACAATCCGCCCTCGCAGCCGCCGCCGCCGCAGCACCACCATGCCCACCCGCTCCACCTGACCCACTCCCATCCCCATCCGCAGCCACCGCCCCATCACCTCAATCACAGCCTGAACCACCACCACCACCAGCCGCAGCAGTATCTACCGCACATGTATCCGGCGCCCGGGGCGGCAGCGGCTCCATATGGCCAGCTGCCGTATCCGCATCTCCAGCAGCAGCACCATCATCATCACCAGCAGCATCCTCCTCCTCCGCATCCGCACCACCTGCCGCTGGCTCTGAGTCTCCATCAGCAGGCAGCGGCTGCGGCGGCAGTGGCTGCTGCGGTGGCCACCAATCACTCCAACAACATCAACAACAACAACCAGGCCAGCGTGGCCAACAACAACATTGTGGTGCCCTGGAAGCAGCGCAAGCGCAAGAGGCTATCGGCGGTGCTGGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCTGCAAGGCGGAGCCCATGGAGATGGAGGAGGACGCCGATGATCACGAGCAGGATGAGGATGAGGATCACACGGAGGAGTCCCTGCGCGACGACGACGATGAGGAGGAGCAGCACGAGGATCTTGAGGGTGAGCAGCGTGGCAAGTACATCAAGAGCGAGCAGCCCGTCAGCGAGGACGAGGAGAACGAGCCGGAGCTGCTGGAGAACGAGGAGAACGAGGACATCTCCGGCGAGGATCTGGAGCTCTCGCACAGCGATGACAACGACCAGGACAGTCCCAGGATCAGCATGAGCCCGCTGCAGCTGCAGGCGGCGCAGAGCAACCTGCCGCAGGATCACCCGAATCCGAGTCAGCAGCTGAACAAGGAGAATCCGCTGCACGTGGACATCAAGACTGAGATACCCAGCCCCTACGATCGGTACTTTCCCATCCCGTCGCCTCTGTTCGGTTACTACCTGCACACCAAGTATCTGAACGAGGTGTTCCGCCGGCGCCACGATCTCTATCCCTCGCCGCTCCAGCACACGCCCTCCTCGATAGCCTCCGAGACGGAGACGTCGCCCAACTCGCAGGAGCGCAAGACTGGCACCTCCTCCTCGAATCACATGCTGCCCCACGTCCTGCTGGCCAATGCCTCGCCGCCGCCCTCGCTGCCTTCGCCGCCGCGCAGCGAGTCCTCGGTGACCAATAGTGGGGCCACCAACAGCAACGCCACCACAAGCACCACCACTACTAGCACCTCTAGCAGCGCCCCCAAGAAGCGCACCAGTCCCAAGCCCAAGGGCAAGAAGGGCGACAAGAAGCCCATGCCGCCGCCACAGGAGCGTCCGCTGGACCTGTGCATGCGCAGCGAAATGGAGATCAAGAAGTACAAAAAGTCGGCCTCCAAATCCTACCAAGAGTCCGGCTCTCCCTCCTCTTCGTCGGCGGCCATGATGCCCCCACCGCCGGCCATGAGTGCGGCCAGCAGCCTGGAGAGCATGAATGCCCTGTCGCCGGCGTCGAGCAGCCACTCGGGACACACGCCCAGCACCACCGCTGCCACGCCCAACCACCAGCCGCCGCCCAACTCGCCGTACGCGAATGCCATGAACGCTGCCCATGCAGCGGCAGCGGCGGCCGCAGCGGCGATGATCAAGCTGGAGATGCCACTGCATCCGCTGCACCACCAGCAGATGCACGGCCATCCCCATGTGCCCACCACCACGGTGGGTGTGCCCGTGATCAAGGGCGATGTGGCCTCGCCGACGACCAAGGAGACGGTGGCCTGGCGCTACAATCTGGACGTGTCGCCCGTGGTGGAGGAGATGCCGCCCGGCTCGGATGTGGCCTATGTGTGCCCCACCTGCGGCCAAATGTTCTCGCTGCACGACCGCCTGGCCAAGCACATGGCGTCGCGCCACAAGTCCCGCAATCCCGCCAATGATATTGCCAAAGCCTACTCCTGCGACGTCTGCCGCAGGTCCTTTGCCCGCTCCGACATGCTCACCCGTCACATGCGCCTGCACACGGGCGTCAAGCCGTACACCTGCAAGGTGTGCGGCCAGGTCTTCTCCCGCTCGGATCACCTGTCCACCCACCAGAGGACCCACACCGGCGAGAAGCCCTACAAGTGTCCGCAGTGCCCGTATGCCGCCTGTCGCCGCGACATGATCACGCGGCACATGAGGACGCACACGCGGTACGAGTCCAGGGGCGGATCGCGAGAGGGTCGTGAGGGAGGAGGACGCGAGGGTCGCGAGGGCAGGGAGTCGCGCCGCAGCGGCGATCGTCTGGAGGAGCCCAAGTCGCCCAGTTCCCATCCGCTGCTCGACATGAAGATGAACATGAACATGGGCATGGGAATGGGCCTCAACATGGGCCTGGGCATGAACCCGATGAGCCTGCTCCAAGAGGAGCTGCTGCAGAAGTCCCAGCCGGGCCTGACTCTCGGCGGGCCCATGCCCATTGTGGTCAAGACCGAGAGCGCCTAA
Protein Sequence: MAARSRQVSRKNPSPRKLQDLLVELPSPSSSQQEEQQLRPTISQTQPVGGSVPKETPPPLPLKPQQVDLMTMAEGTDPMGHGHHTNPHNPPSQPPPPQHHHAHPLHLTHSHPHPQPPPHHLNHSLNHHHHQPQQYLPHMYPAPGAAAAPYGQLPYPHLQQQHHHHHQQHPPPPHPHHLPLALSLHQQAAAAAAVAAAVATNHSNNINNNNQASVANNNIVVPWKQRKRKRLSAVLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXACKAEPMEMEEDADDHEQDEDEDHTEESLRDDDDEEEQHEDLEGEQRGKYIKSEQPVSEDEENEPELLENEENEDISGEDLELSHSDDNDQDSPRISMSPLQLQAAQSNLPQDHPNPSQQLNKENPLHVDIKTEIPSPYDRYFPIPSPLFGYYLHTKYLNEVFRRRHDLYPSPLQHTPSSIASETETSPNSQERKTGTSSSNHMLPHVLLANASPPPSLPSPPRSESSVTNSGATNSNATTSTTTTSTSSSAPKKRTSPKPKGKKGDKKPMPPPQERPLDLCMRSEMEIKKYKKSASKSYQESGSPSSSSAAMMPPPPAMSAASSLESMNALSPASSSHSGHTPSTTAATPNHQPPPNSPYANAMNAAHAAAAAAAAAMIKLEMPLHPLHHQQMHGHPHVPTTTVGVPVIKGDVASPTTKETVAWRYNLDVSPVVEEMPPGSDVAYVCPTCGQMFSLHDRLAKHMASRHKSRNPANDIAKAYSCDVCRRSFARSDMLTRHMRLHTGVKPYTCKVCGQVFSRSDHLSTHQRTHTGEKPYKCPQCPYAACRRDMITRHMRTHTRYESRGGSREGREGGGREGREGRESRRSGDRLEEPKSPSSHPLLDMKMNMNMGMGMGLNMGLGMNPMSLLQEELLQKSQPGLTLGGPMPIVVKTESA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00565654;
90% Identity: iTF_00590464;
80% Identity: -