Basic Information

Gene Symbol
RERE
Assembly
GCA_014170255.2
Location
CM024336.1:4492219-4502100[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-07 0.00015 21.8 0.2 2 45 125 169 124 170 0.87

Sequence Information

Coding Sequence
ATGGCGGCCTCCACTCAAGGAGAAATTCGAGTGGGTCCCGGCCACCAGGTAAACGATGTCTATGCAAAACTGCCCGATTATAATCCAATCTCAAGCTTCCCCATCGACAAGGAAACCGATGAACGTGAACTAGAGGAATCAAGATGGAGTCCAGGCGTTGTGGCCGATGGCGACTTGTTAATGTTCTTGCGTGCGGCTCGCTCCATGGCTGCATTTCAAGGAATGTGTGATGGCGGACTAGAAGACGGTTGTTTGGCTGCCAGTCGCGACGACACCACAATAAACGCACTCGACGTGCTCCACGATTCTGGCTACGATCCAGGCAAAGCTCTACAAGCACTCGTAAAGTGCCCCGTTTCGAAGGGCATCGACAAGAAGTGGACCGAGGACGAAACTAAGAAGTTCATCAAGGGTCTGCGACAGTTCGGCAAGAACTTCTTCCGCATCCACAAGGACCTGCTGCCGCACAAGGACACGCCGGAGCTGGTCGAGTTCTACTATCTGTGGAAGAAGACGCCCGGCGCGAACAACAACCGGCCGCACAGGCGGCGGCGACAGAGCGCCCTGCGCCGCAACCGTGTCACGCGGGCGAACAACAACAGTAACAGCAATACACCTCCCAAGAAGGAGGACACACCGGAACCACAAACTGCGACGACGGCGACGGCGGCGGCGACCGCGGCGTCCGAGACGGCGAGTCGCTCCTCGCCCGCTGTCTCCAAGGAGGAGAACAGCTCGCTCACCGAGGACGACGCCAGCGAGTGCGACAGTGATTCGAGTCTGACCCACAAAAGGGATGAATCACCCTCAAGGATGAGGACGCGAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACCGCCTCCGTGGGCACAGGTTCAACCGGTGCCGCTGGCGGCAACAGCTCTTCCAAGGACCAGACCACAGCCAACGCCGTGGCTAATGGCAAGCGGCCCAAGCGCGGCTCCGAAACGCCGGACGCCGCCGCCGGCGGAGGAGCTACCTCTGTCGACAGCCCCAAAACGCCCACAAAGGCCGTGGCCGAGAGCTCGGCCACCAAGCGCAAGGGCGGCAAGCAGGATACGCCGAACAAGAAGAAGCGCACGGAGCAGGAGGCCAGCGAGCTGCCGAGCGCCCAGGAGGAGAGCGCCGTTGTCAACAAGGACAAGCGCAAGCGACCGGACAGTCCGGTGGAGAGCATGAACTCGGACAGCCGGCCGGACTCCGTGCTCGACGACGGCGAGTCCAATACGACGGACACCACCACCGCCGAGCAGCAGTCCACCAAGGACAGCAAGGAGACGGTCAGCTGCAAGGAGGAGCGCGACATGGTCACCAACGACCTGGACGCCAAGGCCGAGGAGAAGGCCATCATCAAGGCCGAGGCCTCGACGGAGGACAGCAAGGACAGCGCCATCAAGAACATGGACGAGGAGACGAACATCCAGGCGCCGAGCAGCGTGGAGACGAGCTCCACGGACGGACCCAATCCCAATGTAGTATCCAATCCCGTTGCGCCGCCCATTGCCATGAAGGTGCCGACAATAGCCACCGTGGAGGCGCTGAATGCGTCCGTAGACCGCAAGGAGGCCATTGAGAAGATGGAGACGGCCTGCGACAGCGATCCGGAGATGCTCAAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCAGGACCTGAAGGTGAAGATCGAGATCAAGAACGAGGATGCGTTGAAGCACAGCAGCGGCGGAGGTATGCCTCCCTCGGGTCAGGCCCTGCATCCGCTGTCCGGAGCACCGGTGGAGAGTGGTGGCCAACCGGAGCCCCTGCACCTGCACATGCCCCACACAGGCCCGATGCCCCCGCAACCGCCCGCTGGCTACCTCATCGATGGCCAGCTGAAGTACGGACCTCCGGGCCAGGGCGGAGGAGCGCCCTCACAGCCTCCGCAACTGCACAGTGATGCGGCAGGACCAGCCCCTCCTGGGGCGCCTACAACGCCGCAGAAGTATGCGCCGGAGATGGAGCTAAAGTTCACGCCCCAGGATCTCAAGTATCCGCCTCCGCCACCCCTCGATGCGCTCAAGTACAGCCAGGAGATGCAGGCGGCGGCGGCGGCAGCGGCAGCAGCTGCTGCTGGCAAGTACGAAATGAAGTACATGATGGAGCAGCCGGGCAAGTATCCCGTCGAGCTGTCCGCTGCCCACCAGCCGCCGAGCAAGCCCGGCTACCAGGACTCGCTGAAGATACCGGACGTGAAGCCCGGCTTTGGCCACCTGCCGCACAACGTGGGCTCGCCGCTGGACGTCGCGCACAAGTACGGGGGGCCGCCGCCGCCCACCTCCCAGGAGTCGCAGCAGCCGCCCCAGTCCCAGCCTTCCGCGCATCAGGTGCCGCCGGGAGCGACGCCACCGCCTGGCATCGCCATGCCCAAGCCGCACTATCAGCACGACGTGCAGACGCCGCCGCTGGGACGGCCCTTCGAGCCCTCTGGCCTGATGCTCAAGTACGGCGATCCGCTCTCGGCCAAGTACGGTCCGCCGCAGGATCTGAAGTACCCGCCGATGCCACCAGTCTCGCAGGCGGGTCCCTCAGACGTAAAGCCGTACGGCGGCGAGAACCTGATTAAGTCCTCGCCGTACGGACCGCCGCCAGAGAGTCCGATCGACGCCTCGGCCCGCTCCACGCCCGGTCAGGACAGCCAGGGCAGCAACAGCAATTCGCAGCCGCCCTCGATGCCCCCTCAGCCGCAGCAGTTCCAGTCGCCGCATCCCTCGCCGCACATGCCTTCGCCAGCTGGCCTGCCGCCCGGGATGCATCCGCAAAATCTCATCCACGGCCCGCCTCCAGGTTCAGCGGGTGGCCCTCCTCCGCCGCCCACGTCGCTGCACCAGCCGACGCCCGTTTCGGGTCCGCCGAGCCTGCAGCACGGACTGCATCCGAGTCAGCAGCATCCGCAGCTTTCGGTGGCCTCCTCGCTGCCCCCGAGCTCCATTGGGATCCCACCCACGCTCTCGACGATGGCGCCCTCGCACATGCATCCTCACCTGCACCCGCACCCGCATCTGCAGGGTCTGCATCGGCCGCACGACCTGCCGCCCAGCATGCATCCGCATGCGCCCATGCCGCTCTCGCTGCAGGGACATCCGCAGCACGCCCACGGCATGCCGCCCTCGCACGCGTCCCAACAGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCCGGGCGGACCTGTCGGCACGGTGCGCACGCCCTCGCCTGCCCAGCAGCCGCCGCGGTCTCTGCACGATCCGCAGTCGTCGCGGGAGCCGCCCAACTCGCAGCCCTCGACCACGATGGCGGGTGGATCGAGTGGAGGTCCCGGAGGACCGCCACCGCAGCAGTCTCCGCACTCGCATCGGACCTCGCCGCTGCCAGGACTCTCGGGAAGCGGACCACCGCCACCGGGACTCATCGGGCACCCGATGCCGATACACCCGCACCTGGCACACCTGCCGCCGGGCCATCCGGCCCACGCAGCGCTGGCCCACCCCGGTCACCACCTGCTGTCGCACTCGATAGCCGGCCTGGGACCCGGCGGCGGACCCATCGCCCTGCTGGCCGGACCCGGCGGCCTCGGAGGTATTCCAGAGTCCGCCCTGAGTCGTCGCACCCCGCCCTCGCACCTGCCACATTCACACGCCTCCTCGCTGCCGCCACACTCGGTGGCCGCCAGCATGGCGCCCACCAGCGTGTCGCTAACCACCAGCACGGTGCCCTCGTCCGCCTTCAGTCGCGCCAGTCCCAGCGTGCAGATCTCGAGCGGCGGCGGTGGGGCTCCGTCTGGTCCTGGCAGTGGTGGACCTGGAGGAATGCAAAACTCCTCGGCAGCCGCAGCTGCAGCGGCGGCGGCAGCTGCTCACCGCGCGGCGTCCCCGGCTTCCAGTGTGGGCAGCCTGAGCCGCCAGAGTCCGTTGCATCCGGTGCCGCAGTCGCCACTCAGCCATCATCCCTCCTCCTCCGCGCTATCCGCAGCGGCGGCTGCCGTGGCAGAGAGGGATCGGCATGCGCTGCTGCGTCAGCAATCGCCGCACATGACGCCGCCGCCGGTGTCGAGCGCCTCGCTGATGGCCAGTCCGCTGAGCAAGATGTATGCGCCCCAGCCGGGCCAGAGGGGGCTGGGCACGTCGCCGCCACCTCACCTGCGGCCGGGCGCCTCGCCGCCGGTCATTCGGCACCCGCAGATGCCTCTCCCGCTGCCACTGATAGCGCCTGGCGGCGGTATTCCGCAGATCGGAGTGCATCCGGGTCAGTCTCCGTATCCGCACCCGCTGCTGCATCCCTCTGTCTTCTACTCGCCGCACCACCACCCCTTCAACTCGCCCTATGGCTATGCGCCGTACGGACCGGGCTTCCCGGCCTACATGAAGCCGCCGCCGCCGGCCGGACCCCTGGATCCGGCCGCCGTGATGGCCGCTCACCATGCTGGCCTGCAGGGACCACCGCCGCAGCAGGTGCGCCAGGACGAGCAGAATGCGGCGGCCGCCGCAGCAGCAGCAGCTCATTCAGCCGAGAAGCAGCACGCCGCCGCCGCTGCGGCTGCAGCAGCCCAGCAGCTGAAGGCGCCGCAGCAGCAGCAACAGCAGGGCGGCATGCAGCCCAACAAGCCGCCGACGCCAAAGACGCCACAGGGACCGGGCGGTGGCGGGATGCCATCTGGCATGGGCGGCCCGGGAACTCCAACGGGCCTGCCTCCAGGCGCCTATCCAGGCAGCCATATGCCGGGCTATCCGCCAGGACCGCCCCATGGATCGCCTTTCGCGCCCCAGGATGGCCAGCCGCACGGCATGAAGCCCACTTCGCACATGGATGCCCTGCGAGCGCATGCACACTCGGCGAACTCGGCGGGATTGGGCGGAGGGCATCATCCAACGGAGCCACTGCCCATTGATATTGAGCCGGATCCGGAGCCAGAGATACCCAGTCCCACGCACAACATACCACGCGGACCCAGTCCCGAGGCGAAGCCGGACGACACCGAGTGCCATCGCTCCCAGTCTGCCATATTTGTGCGGCACATCGATCGCGGGGATTACAATTCGTGCACGAGAACGGATCTGATATTCAAGCCGGTGGCAGACTCGAAGTTGGCGCGCAAGCGCGAGGAACGCGACCGCAAGCTGGCCGAGAAGGAGCGCGAGCGGCGTCAGTCGTTTTCCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCGATACGCCGGCCCTGCGCCAACTGTCCGAGTACGCGCGTCCCCACGTCGCCTTCAGTCCTGTTGAACAGATGGTGCCATATCATCATCCAATGGGCCCCATGTACAGAGAGAGGGAACTGGAGGAGATCAAGAACGCACAAGCCGCTGCGGCGAGTCAATCCCGACTTGATCCGCACTGGATGGAGTACTACCGACGCGGCATCCACCCCTCGCAGTTCCCGCTGTACGCGAATCCGGCGATATCGCAAATGGAGAGGGAGCGCCTGGGAATTCCACCCCCGCACCATGTCGGGCTTGACCCGGGCGAGCACATGGTGCGTATGATACGATTGACGAGAGAATATCATGCACACTCTCATACTCATTTACATTTGCCTTTGCATCCACAGCCGCAACCACCGGAGGCCGGTTTCCAACTGCCACCGAATGTTGGTCAGTATCCGCGGCCAAATATGCTTATACCTAGGGAGCCGCACTCGGATGTCCTGCTGCGCATGTCCTATGCCGACCAACTACAGTATTTACAGGCCGCCGAGTTCCAGCGACAGTCCCTGCACGATCAGTACTTCAGGAGGAGAACCCAATTCCTGGGTAGACCCTTCTACGACGAACTAAGCAGTCTGGCGAATGTGCGCCTGGATGATCTTGCGGCCTTTCTGTCCTCAATCGGGTGGTTCCGGGGGCTTCCGCATTCCTAG
Protein Sequence
MAASTQGEIRVGPGHQVNDVYAKLPDYNPISSFPIDKETDERELEESRWSPGVVADGDLLMFLRAARSMAAFQGMCDGGLEDGCLAASRDDTTINALDVLHDSGYDPGKALQALVKCPVSKGIDKKWTEDETKKFIKGLRQFGKNFFRIHKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQSALRRNRVTRANNNSNSNTPPKKEDTPEPQTATTATAAATAASETASRSSPAVSKEENSSLTEDDASECDSDSSLTHKRDESPSRMRTRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASVGTGSTGAAGGNSSSKDQTTANAVANGKRPKRGSETPDAAAGGGATSVDSPKTPTKAVAESSATKRKGGKQDTPNKKKRTEQEASELPSAQEESAVVNKDKRKRPDSPVESMNSDSRPDSVLDDGESNTTDTTTAEQQSTKDSKETVSCKEERDMVTNDLDAKAEEKAIIKAEASTEDSKDSAIKNMDEETNIQAPSSVETSSTDGPNPNVVSNPVAPPIAMKVPTIATVEALNASVDRKEAIEKMETACDSDPEMLKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDLKVKIEIKNEDALKHSSGGGMPPSGQALHPLSGAPVESGGQPEPLHLHMPHTGPMPPQPPAGYLIDGQLKYGPPGQGGGAPSQPPQLHSDAAGPAPPGAPTTPQKYAPEMELKFTPQDLKYPPPPPLDALKYSQEMQAAAAAAAAAAAGKYEMKYMMEQPGKYPVELSAAHQPPSKPGYQDSLKIPDVKPGFGHLPHNVGSPLDVAHKYGGPPPPTSQESQQPPQSQPSAHQVPPGATPPPGIAMPKPHYQHDVQTPPLGRPFEPSGLMLKYGDPLSAKYGPPQDLKYPPMPPVSQAGPSDVKPYGGENLIKSSPYGPPPESPIDASARSTPGQDSQGSNSNSQPPSMPPQPQQFQSPHPSPHMPSPAGLPPGMHPQNLIHGPPPGSAGGPPPPPTSLHQPTPVSGPPSLQHGLHPSQQHPQLSVASSLPPSSIGIPPTLSTMAPSHMHPHLHPHPHLQGLHRPHDLPPSMHPHAPMPLSLQGHPQHAHGMPPSHASQQQQQQQQQQQQQPGGPVGTVRTPSPAQQPPRSLHDPQSSREPPNSQPSTTMAGGSSGGPGGPPPQQSPHSHRTSPLPGLSGSGPPPPGLIGHPMPIHPHLAHLPPGHPAHAALAHPGHHLLSHSIAGLGPGGGPIALLAGPGGLGGIPESALSRRTPPSHLPHSHASSLPPHSVAASMAPTSVSLTTSTVPSSAFSRASPSVQISSGGGGAPSGPGSGGPGGMQNSSAAAAAAAAAAAHRAASPASSVGSLSRQSPLHPVPQSPLSHHPSSSALSAAAAAVAERDRHALLRQQSPHMTPPPVSSASLMASPLSKMYAPQPGQRGLGTSPPPHLRPGASPPVIRHPQMPLPLPLIAPGGGIPQIGVHPGQSPYPHPLLHPSVFYSPHHHPFNSPYGYAPYGPGFPAYMKPPPPAGPLDPAAVMAAHHAGLQGPPPQQVRQDEQNAAAAAAAAAHSAEKQHAAAAAAAAAQQLKAPQQQQQQGGMQPNKPPTPKTPQGPGGGGMPSGMGGPGTPTGLPPGAYPGSHMPGYPPGPPHGSPFAPQDGQPHGMKPTSHMDALRAHAHSANSAGLGGGHHPTEPLPIDIEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVADSKLARKREERDRKLAEKERERRQSFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTPALRQLSEYARPHVAFSPVEQMVPYHHPMGPMYRERELEEIKNAQAAAASQSRLDPHWMEYYRRGIHPSQFPLYANPAISQMERERLGIPPPHHVGLDPGEHMVRMIRLTREYHAHSHTHLHLPLHPQPQPPEAGFQLPPNVGQYPRPNMLIPREPHSDVLLRMSYADQLQYLQAAEFQRQSLHDQYFRRRTQFLGRPFYDELSSLANVRLDDLAAFLSSIGWFRGLPHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00489318;
90% Identity
-
80% Identity
-