Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_014170255.2
Location
CM024337.1:14337635-14342185[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-14 1.4e-11 44.3 0.2 3 44 658 699 656 701 0.95

Sequence Information

Coding Sequence
ATGAACACACTGGGTCCTAAGAAGGACGGAAGTCCGAATATTGACTTTTTCCAGTCGCCAGAGACGCTGCAGGGCTTCGAATCCATTCGACAGTGGCTTCAGAAGAACTGCAAGAAGTATTTGGCCCACAGCTCGGAGCCCATTACGAAGGAGTCTCTGGCCCAACTGCTGATCCACTTTCTGCAGTATGTGGAGGCGAAGCTCGGCAAGAATTCAGCGGAGCCGCCGGCGACCAGAATTCCGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGCGGCCTGTGCATCATCTTCTCGACCATGTTCCGCTTCCGGGCGGAGCAGCGCGGCAAGAAGTTTGACTTCTCCATCGGCAAGAATCCCACGCGCAAGGATCCCAACATCCAGCTGCTGATCGAGATTGAGCAGGCGCTGGTGGAGGCCGACCTGTACCGCATTCCGTACATTTACATCCGACCGGAGATCGAGAAGGGTTTCGAGGGGCGGCTGCGGGAGATCCTTGACAATCGGCGGGTGGAGATCGTTTCCGACGAGGAGGAATCCACCCACATCGTCTACCCCATCGTGGATCCCCATCCCGACGAGTATGCGCGGCCCATCTTTAAGCGCGGCGGCCACGTAATGCTGCATTGGTACTACTTCCCGGAATCCTACGATTCCTGGGCTGTGAACAATTTTGACCTGCCGGATCACATCCCGGAGAATCCCGAGTCGCCGGCGGAGCGCTGGCGCGTTTCCGCCTCCTGGATCCTGGACCTGGAGCAGTACAACGAGTGGATGGCCGAGGAGGACTATGAGGTGGACGAGCAGGGCAAGAAGAAGACGCACAAGCAGCGCATGTCCATCGACGACATCATGTCGTTTGGCGACGAGAAGAAGAAGCCTGCCACCAGCTCTGGAGGCGGCAAGCAGAAGCGACGCCGCTCGCCCTCGCCGGCCACCTCTGCATCTACCTCGTCCTCGAAGCCGGGCAAGCGCAAGCGATCTCCCGCCGTTGTGCACAAAAAGTCGCGCAATGACGACGACGACGAGGACCTGACTCGCGACCTGGACGACCCACCGGCCGAGCCCAATGTCCAGGAGGTGCACAAGGCCAACGCCGCGCTGCAGTCAACGGCCAGCCCTGCTCCGGGTGGCAAATCTCGAGGCGACAACGATATGATGCCTATTAAGGGTGGCACAATGACCGACCTGGACGACGAAATGACCGGAGGAAGCGCTGCCCAGGCCATGTCCACCGGAGATGGGGACAACTCACAGACGGGCAAGACGAGCGATAACAGCAACACCCAGGAGTTCTCCTCGTCGGCCAAGGAGGACATGGAGGACAATGTTACCGAGCAGACGCACCACATCATTGTGCCCTCGTACTCGGCCTGGTTCGATTACAACTCCATTCACGTCATCGAGAAGCGAGCCATGCCGGAGTTCTTCAACAGCAAGAACAAGTCCAAGACGCCGGAGATCTACATGGCGTACAGGAACTTCATGATAGACACCTACAGGCTCAATCCGACGGAGTACTTGACCAGCACCGCCTGTCGGCGCAATTTGGCCGGCGATGTGTGCGCCATCATGCGGGTCCACGCCTTCCTCGAGCAGTGGGGCCTGATCAACTACCAGATCGATGCGGATCTGCGTCCGACGCCCATGGGTCCGCCACCGACCTCGCACTTCCATATTCTTTCGGACACACCGTCGGGCCTGCAGGCCATTAATCCACAAAAGACCCAGCAGCCGTCGGCGGCCAAGACGCTGCTCGATCTCGACAAGAAGCCCCTGGGCAAGGACGGAGGTCTGGAGTTGGGCGACAAGGGTGGCCTGGCTGGCATTAAGACCGAGGCCCTCGAGAACGGAGGCGCTGGAGCTGGCGGCTTGAGTTCCGGAGTGAGCCAGTTTGGCCTGAAGCTGGATCAGTATGCCAAGAAGCCGGCGGCCATGAGGAATCGCACGGCGGCCAGCATGGCGCGGGAGTGGACCGACCAGGAAACACTGCTGCTGCTCGAGGGACTCGAGATGCACAAGGACGACTGGAACAAGGTGTGCGAGCACGTTGGCTCGCGAACCCAGGACGAGTGCATCCTTCACTTTCTGCGGCTGCCCATCGAGGACCCGTATCTGGAGGATGACGGCGGCTTCTTGGGCCCGTTGGGCTGCCAACCGATTCCCTTCAGCAAGAGCGGCAATCCCATCATGTCCACCGTGGCCTTCCTGGCCTCTGTGGTCGATCCGCGCGTAGCTGCAGCAGCCGCCAAGGCGGCCATGGAGGAGTTTGCTGCCATTAAGGATGAGGTGCCTGCCACCATTATGGACAATCACATGAAGAACGTGGAGAAAGCCTCGGCGGCCGGCAAATTCAATCCCAACTTTGGCCTGGCCAACAGTGGAATCGCCGGAACAGGCAACGATAAGGAGGATGAGGAAGGCAAGGAGGGAGCCTCTGCATCGACTGGCGGTGGATCGGATGAGGAAATGAAGGATCTAAGCAAAAAAGACGACGAGGCCAAGTCCAAAGACAAGACGAAATCGGATAAGACCAACACGAACACAGACTCGAGTTCCACATCATCATCGTCGGCGTCAGGCAACACCAACAACACCGACAAGAAACCGAAAGAGTCGTCCGCCTCCTCGCCTTCGGGCGACAAGTCGGCCACCAAGTCAGACAAATCAACAAACAAATCCTCACCCACAGACCCAGCCACTTCTGCCGGCGGAGCCGCCGATGTGGACATCAAGACGGAGGACAGCAGCGGCGATGGCGAGACCAAGGACGGCAGCGAGGGCAAGGAAGGTTCGGGAACGGGCGCTGGCTCAGGGGCTGCGGCCAAGGAGGGAGCCTTCAGCGAGAACAATATGCAAACGGCGGCGGCGGCCGCTCTGGCATCTGCCGCAGTCAAGGCCAAGCACTTGGCTGCTCTGGAGGAGCGCAAGATCAAGTCGTTGGTGGCGCTGCTCGTCGAGACACAGATGAAGAAGCTGGAGATCAAGCTGCGCCACTTTGAGGAGCTGGAGGCCACCATGGAGAGGGAGCGCGAGGGCTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCCCAGTCCCAGCCCATGGCGGGGCCCACCGCCCAGCACCAGCCGCTGCCACCGCATATATCCGGATCCGTAGCTCCGCCACCCAACGGTGCTCCCTTCCCAGCGCCACCCACTGTGGCCGCTGGTGGACCCCCACCGCCTGGGGCACCTGCGGCCCTAGCCGCGACACCCGGCGACCAGGCAGGCGTAGCAGGAGCACCAGCAGCAGCGCAATCTCAGGGACCCACACCAATGGACACCACACCGCCAAGCAGCGTCCCAGTGGCAGAGGTCAGCGGCGCCCCACCGGGATCAGTGCCCCCAGCCGCCGCCGCCAGCATTCCCCCCGCAAGTACTGCCCCAGTCGCCGGCACCGCTCCTCCTTCTTAA
Protein Sequence
MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLIHFLQYVEAKLGKNSAEPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKGFEGRLREILDNRRVEIVSDEEESTHIVYPIVDPHPDEYARPIFKRGGHVMLHWYYFPESYDSWAVNNFDLPDHIPENPESPAERWRVSASWILDLEQYNEWMAEEDYEVDEQGKKKTHKQRMSIDDIMSFGDEKKKPATSSGGGKQKRRRSPSPATSASTSSSKPGKRKRSPAVVHKKSRNDDDDEDLTRDLDDPPAEPNVQEVHKANAALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQAMSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKDGGLELGDKGGLAGIKTEALENGGAGAGGLSSGVSQFGLKLDQYAKKPAAMRNRTAASMAREWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAAGKFNPNFGLANSGIAGTGNDKEDEEGKEGASASTGGGSDEEMKDLSKKDDEAKSKDKTKSDKTNTNTDSSSTSSSSASGNTNNTDKKPKESSASSPSGDKSATKSDKSTNKSSPTDPATSAGGAADVDIKTEDSSGDGETKDGSEGKEGSGTGAGSGAAAKEGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQSQPMAGPTAQHQPLPPHISGSVAPPPNGAPFPAPPTVAAGGPPPPGAPAALAATPGDQAGVAGAPAAAQSQGPTPMDTTPPSSVPVAEVSGAPPGSVPPAAAASIPPASTAPVAGTAPPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00482914; iTF_00606243;
90% Identity
-
80% Identity
-