Basic Information

Gene Symbol
Tef
Assembly
GCA_014170255.2
Location
CM024335.1:11784952-11785558[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.9 9.7e+03 -3.4 1.1 4 8 16 20 13 22 0.49
2 2 7.8e-13 7.5e-10 38.6 8.3 2 62 109 169 108 171 0.96

Sequence Information

Coding Sequence
ATGCACTCGCCAGCCCAATCGCCCATCCTGGATGTCACCGAGACCCGTCGTCGTCGTCGTACTCATTTCCTGCTCCTCACAATCTCCGACTGCCCAGGCCTGGGATTCCCCGGACTGATGCCACCTGCCAAGGGATCTCCCGGACCGGTGGCCCACACTCTCCCCGCCTTCGAGTACATTGCTCCTCCGAGTCACGCCCTTCAGGCCCTGGAATTCCCGCTGATGGAGCTCAATCGCGTGGGCGTCATCGGCGGCGGAATGTTTCCAGGTTTCATGCACCGACGGGTTCGCGGCGAAAAGCGACCGATTCCGGATGCCCAAAAGGATGCCAAGTACTACGAGAGACGCAAGCGGAACAACGAGGCGGCCAAGAAGTCTAGGGATGCCCGGAAAATCCGCGAGGATCGGATAGCTTTCCGGGCTGCTCTGCTCGAGCAGGAGAACTCTATACTGCGTGCCCAGGTTATGGCTTTAAGGGACGAGCTGCAGACGGTGCGCCAGCTCCTGGGGGCCACCACCGCTGGCGGGATGTTGTCGATGGCCAGACAGGTGTGA
Protein Sequence
MHSPAQSPILDVTETRRRRRTHFLLLTISDCPGLGFPGLMPPAKGSPGPVAHTLPAFEYIAPPSHALQALEFPLMELNRVGVIGGGMFPGFMHRRVRGEKRPIPDAQKDAKYYERRKRNNEAAKKSRDARKIREDRIAFRAALLEQENSILRAQVMALRDELQTVRQLLGATTAGGMLSMARQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-