Basic Information

Gene Symbol
-
Assembly
GCA_035043265.1
Location
JAWNND010000670.1:48835-49833[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-11 8.5e-08 32.7 0.0 20 89 142 203 127 203 0.82

Sequence Information

Coding Sequence
atgaacaaTCCACGGGAGCATCTTCGGTGCAGTAGAAGAGGATGTACTTATACAACCAACAGATCATATAACCTAGAGCGGCACGAACGCAACCATGATAAAGGCAAGGTACCAGTATCCCAGTGCAAACCATGTCCGCATTGCACATATGCCGCTGGATCACTGCACAATTTAATGCGACATATTAGCaaaaaacatgaaatattgacaataaaaaggcaaaaagaacaacagcaggagGAGGTGCCATCGGCTGAGGAGCAGTCATTACTACACTTTGTATATACGCCAGATCATGACCAAGAAGTGAAAACTGAACCACAGTTACTGGCATTTAATGCTAATGGACCAAAATTCAAGCCTTCGCTTTGGCATTGGAGCACGCTTcagcaacaagaaaagaaTTTCTTAAGACGCAGTGCCCTGAACGAAGAGTGTAATATACTTGATCGGACCGTTAAAATGTTCAAGTTGTACTCTTTGGTGAAATCCAGAGGTGGAGCCATGAATGTGGATGAATGGGATCATGTTGCAGCAGCCTTGGGCCTTCCACCAGGGTCAGGTCGTCATGTTCGGGTCAAGTACGTTGATGTGCTTATGGAATATGAGAAAAATGAGGAAAAACGATTACAGGAGTGTCAGAATATAGAGGGTGTGCCTTCTTGGTGGGATGATGGTAATTTTATCATTGATAACGGCAGTACCAAGCCCAATGAAACACAATACTGGAAAAGCGCGGAACGCAGCTCATCTACGAGTATAACAGTTCGAAGTGCCATTGTTAAAATGATAcattataagtattataagAATCATCTCAATATAAGCAAACCATTTCAACGGTTTCACGTAAAGGACTCGTGGCTTTGTGCCACAATGGTGAATTATCAAGCGCTTATTTgccaattgcattttaaacatTGTAATGATTcctaa
Protein Sequence
MNNPREHLRCSRRGCTYTTNRSYNLERHERNHDKGKVPVSQCKPCPHCTYAAGSLHNLMRHISKKHEILTIKRQKEQQQEEVPSAEEQSLLHFVYTPDHDQEVKTEPQLLAFNANGPKFKPSLWHWSTLQQQEKNFLRRSALNEECNILDRTVKMFKLYSLVKSRGGAMNVDEWDHVAAALGLPPGSGRHVRVKYVDVLMEYEKNEEKRLQECQNIEGVPSWWDDGNFIIDNGSTKPNETQYWKSAERSSSTSITVRSAIVKMIHYKYYKNHLNISKPFQRFHVKDSWLCATMVNYQALICQLHFKHCNDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00583462; iTF_00557689;
90% Identity
iTF_00557689;
80% Identity
-