Dtei009056.1
Basic Information
- Insect
- Drosophila teissieri
- Gene Symbol
- -
- Assembly
- GCA_016746235.1
- Location
- CM028593.1:22299161-22302619[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 9.7 8.4e+02 0.6 0.0 5 11 215 221 214 224 0.87 2 9 0.089 7.7 7.1 0.1 1 14 384 397 384 405 0.78 3 9 5.4e-05 0.0047 17.2 0.9 1 23 728 751 728 751 0.98 4 9 1.3e-06 0.00012 22.2 3.2 1 23 787 809 787 809 0.97 5 9 5e-06 0.00043 20.4 2.3 1 23 815 837 815 837 0.98 6 9 2.8e-05 0.0024 18.1 0.9 1 23 843 865 843 865 0.98 7 9 0.00072 0.063 13.6 2.3 1 23 871 893 871 893 0.97 8 9 0.0083 0.72 10.3 0.0 2 23 900 921 899 921 0.96 9 9 0.00053 0.046 14.1 0.2 1 22 927 948 927 948 0.95
Sequence Information
- Coding Sequence
- ATGCGACAGCAGTGTGGCAGCGTTTACACCTGGAACTGCGCCGGGGAGCTCTATGGCATTGAATGCTCTCTGTGCGAGGAGCGGCCATTATGCGCCTTCTCCGAATTCCCGGAGCACATGGACGTGTGGCACTCCGACTGGCAGGCGCCTGAAGTTGAGGGCGATGACAGTACCTCAACTGTAGCCATTCCCGAGGATGAGCTCATGCAGGAGGTGCTAGCTGAGCAGCGCTCCAATGGCGAGGATAATGAACTTAAGCAACAACTTGTGCAGCAATTAAATGCCGTTGAGGAGGCGGCGTATTTGCGTAATCCTAGAGAGCTATTGCAAGTTACGGAAGGACCCGGAGAACCTGTCAAAAATGTTGTCAATAGACCAGACAAAATGGAACCAATTCTTCAAACACCTATAAAGGTTGCAGAAATCAGAAAAGAACTTAACGAGTGCCCATCAGTTCCAGATTCTACAATGCAGGAGGTATCACCCGTTTTAGAGGGCCAACGCCTCACGACCCACCATGTACACCGCCTGATCGATTTGTACCGCTCGGAGCCTCGTCTCTGGAACCAGACGCATGAGCAATTCCACAACATGGAGCTCTGCCGCGACTCCTGGCGCCGGATAACGAGTGCCTGGAGTGCTTATTGCGGCCGAAGCTTCAGCGTGACGGACGTTCGGATCCGCGTCTCGACGCTGTGTCAAAGATTTCTGAAGCAAAGAGAGCGTTTGGAGGCGGACGGTGAATTGGATGATGTCGCCAAGTTTGCGCATTTCGACCAATTGAGCTTTCTGTGCGAGCAACAATCTTTATTAAAACGGCAACGTCACTACGCCCGAGAGAACAGCCGTCTGCTGGAGTTTTACGAGCACTATCCGGTTCTATGGCACAATGCACACAAGCGGGTCCGATGTGCCAAGACCGTACGTCAGCGGCATGACGCTCTCCTGGGTCTCCAGATGGCATTGCGACTTTCGGGAATTAGCCTGTCGCCCGTGGTTATCCAGCGGCGGTTGCAATCGCTGCGAAAGCGATATCGGCTGGAAAAGATAAGCTATCTGCAAAGTGTGGTGGAGGGAAAGCAGGATGAGTTTGTATCGGGATTCGAGCACTACGCGGAAATGGAGTTCCTGCACAAGCACATCGACCCTTATGTGTGCGCTGTGTGTGGAAAAATTTTTGAGAACCTGGTAGGTCACCAAACCCATGTGCAGAGCAGCTGCGAGGTGATAAAAATGGTTAAAGCTAATGACCAGGAGATGGATAATCCCGTGCAAGAAGTGCTAAATGAGAAGAAGGAGCTGGTTGAAAGAGTAACCGAACAATCAGTTGAGTTTTTAAAGGAAAAGTTAGAGGAACCCCTTATGGACACTCAGCTAATGGAAAATTCTTCTGGGAATAGGTTGGGTACCATAGATGCTAAATATCGCCATGTGCCAAACCTGGCGGAGGCCTGCGCCGCTGCACAGTTGGAAGATTCAAACGATCTAGATACCTCCATAAACATCATGGATAATGATCTAGCAGAGGAGAGACTTCCACTTCGTTTGACTCTTCCAGAAGCTCAAGACCTAATCCGTCTGTATCGATCTCATGTGTGTCTCTGGGATCCGAATCACCTGGACTACCACTCCCGCAAACAACGTAGACTGGCCTGGCAAACCATAACGGAGAACCTGAAGTCTAAGGCCGGGCAGCGACTCACCTGGCAAACGCTACACCGCAAAATCACTGATTACACCAAGTACTACCGCAAAGAGAGACAAAGGAAAATCAAGGAAAAGGACAGTAATTCAAATTGGAATCTGTTTGATGAGTTTCACTTCCTGGATGATGTACTGCCCATCAGCAGCGAGATGCAGAAGAACGGGAAGCAACGGGATAGCAACCTGAAGATCATCACCGTTTATCAGGGCTATGCGCAGCTCTGGTGCACAGATCACCCGGATTATACAAAGCGACGGCAGCGTCAGAGGCACCTGGAATCCTTGTGCACTAGACTGCAGGAGGAGTGCAATCTGCAGATGACAGTCGAGCGTTTGAAGAGTCGGCTCATAGAATTTCGCTGCCAGTATCGCCACTGCAAGGAGGCCCGAATGGCAGCCGACAACAAATCGGAACCGTGGACCCCTAACTATGAATTCTATGAGCCGCTGCGTTTCCTGGAGCTGCATGTTGCGCCCTTTCAGTGTCCCAGGTGTCCAGCATCCTTCAAACGACGAACGGATTACCTACAGCACGAGCGGAAAGTCCATGGCGATTCTGAAAAGCCCTTGGACGGCGATTTTTACTACTTGCGGCGACGTAAAAACAGGAAACTAAACGAGGAGGATGATCTGCAGCAGGATCAGAACCTGGCCCATATATGCCATATTTGTGGACTGAAGTTTTCGCAAAGGAGCAGCCTATTGGCGCATCTCCGTCGACATCTGGGCCAAAGAACCCACGTTTGTACCGACTGCCCTAAGAAGTTCTTCAGCTCGACGGCTTTGCGGGTCCATCAGAGGAGTCACACCAAGGAACTGCCCTACGTGTGTGAGCATTGCGCCCGAGGATTCGTGAATGCCAGCAAGTTAAATCAGCATGTTAAGCGACACAGAAACCAGCGGGACTTTTCATGCAATAGATGCGACAAGGCGTTTTACACGGCTCACGAGAGGGACCGTCACTTGCGTGCCCATCTAAATATTCGGGACAAGGTGTGTCCATACTGTTCACGGGCGTTTGTGGTGGGCAGTGCCTACTACGCCCATCTAAACCTCCATCGCTCCGAGAAGCGCTACGCATGCGAGGCCTGCGGTAAGAGGTTCGCCCAATATGCTGGACTATACAAACACCGTAGGCGATGCCTACCAGCTGAGGTTTTGGAGGAGTGA
- Protein Sequence
- MRQQCGSVYTWNCAGELYGIECSLCEERPLCAFSEFPEHMDVWHSDWQAPEVEGDDSTSTVAIPEDELMQEVLAEQRSNGEDNELKQQLVQQLNAVEEAAYLRNPRELLQVTEGPGEPVKNVVNRPDKMEPILQTPIKVAEIRKELNECPSVPDSTMQEVSPVLEGQRLTTHHVHRLIDLYRSEPRLWNQTHEQFHNMELCRDSWRRITSAWSAYCGRSFSVTDVRIRVSTLCQRFLKQRERLEADGELDDVAKFAHFDQLSFLCEQQSLLKRQRHYARENSRLLEFYEHYPVLWHNAHKRVRCAKTVRQRHDALLGLQMALRLSGISLSPVVIQRRLQSLRKRYRLEKISYLQSVVEGKQDEFVSGFEHYAEMEFLHKHIDPYVCAVCGKIFENLVGHQTHVQSSCEVIKMVKANDQEMDNPVQEVLNEKKELVERVTEQSVEFLKEKLEEPLMDTQLMENSSGNRLGTIDAKYRHVPNLAEACAAAQLEDSNDLDTSINIMDNDLAEERLPLRLTLPEAQDLIRLYRSHVCLWDPNHLDYHSRKQRRLAWQTITENLKSKAGQRLTWQTLHRKITDYTKYYRKERQRKIKEKDSNSNWNLFDEFHFLDDVLPISSEMQKNGKQRDSNLKIITVYQGYAQLWCTDHPDYTKRRQRQRHLESLCTRLQEECNLQMTVERLKSRLIEFRCQYRHCKEARMAADNKSEPWTPNYEFYEPLRFLELHVAPFQCPRCPASFKRRTDYLQHERKVHGDSEKPLDGDFYYLRRRKNRKLNEEDDLQQDQNLAHICHICGLKFSQRSSLLAHLRRHLGQRTHVCTDCPKKFFSSTALRVHQRSHTKELPYVCEHCARGFVNASKLNQHVKRHRNQRDFSCNRCDKAFYTAHERDRHLRAHLNIRDKVCPYCSRAFVVGSAYYAHLNLHRSEKRYACEACGKRFAQYAGLYKHRRRCLPAEVLEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00619359;
- 90% Identity
- iTF_00619359;
- 80% Identity
- -