Dtei000981.1
Basic Information
- Insect
- Drosophila teissieri
- Gene Symbol
- -
- Assembly
- GCA_016746235.1
- Location
- CM028597.1:28008256-28013436[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 8.6 7.5e+02 0.8 1.5 3 13 63 73 62 78 0.81 2 13 0.005 0.43 11.0 0.6 1 23 215 238 215 238 0.97 3 13 0.00037 0.033 14.5 4.0 1 23 243 266 243 266 0.94 4 13 2.3e-05 0.002 18.3 1.9 1 23 271 293 271 293 0.98 5 13 8.5 7.4e+02 0.8 5.7 1 23 299 323 299 323 0.94 6 13 0.00048 0.042 14.2 3.9 3 23 334 355 333 355 0.95 7 13 0.0028 0.25 11.8 0.2 1 23 361 384 361 384 0.96 8 13 0.012 1 9.8 0.0 2 23 395 417 394 417 0.93 9 13 0.00029 0.025 14.9 0.2 1 23 445 467 445 467 0.97 10 13 6.4e-06 0.00056 20.1 4.0 1 23 474 496 474 496 0.97 11 13 0.00018 0.015 15.6 0.1 2 23 503 524 503 524 0.97 12 13 0.00021 0.018 15.3 1.3 1 23 531 553 531 553 0.99 13 13 0.0001 0.009 16.3 3.7 1 23 559 582 559 582 0.98
Sequence Information
- Coding Sequence
- ATGGAAACGTGCCGCACCTGTGCGATTTCCATGTTTGTGTGCGATTTCGAGAGTGGCGTAAACAACAGCCACTTCCTGGACCTCCATCATCCCAACTGCTGGCCCAGCGAAATGGCCCAGATACGCCTCCAGTTCGCCAACTGGAATCTAAAGATCTCTCCCAACGATGGACTGCCCCAGAAGATCTGCAGCGACTGCTTCACCAAGTTCTGCTCGATCAACGCATTCCGAGTCGCCTGCCAGGAGGCACAGCTGAAGCTGTCCAACATCTACGACAAGATCGATGCCAGCAGCCTGGAAGATGAGCACCACGAGGACCTGGAGCAGGCGGAGGAGCATCAGGAATCGGAAACATCCAAAGCAACATCGACGGTTTCAGCCGAAACACAACCAAACACTGCCAGTGATCCCATAGAGATTTTTGTGGATGCCGTAGACATCGACGAGGCGGAGGAGCAGGAGCAGGAGGAGGAGGAGCAGCAGTATGATGGGGAGTTGGACGAATCAATCACAGAGCAGTCTGCTCCCCCGGAACTGACCATCAGCTATGCCTGCAAGTTCTGTCTGCGCCCGCAGGAGAGCTACCAGCTGCAGCAACTCTTGCTGGAGCACATCAACGCCAGCCACGATCCGGAGCAGCCGTACAATTGTCCGGAGTGCGAGGCCCGCTTCCAGGACGCCGCCTCGCGCACGGTGCACCTGAAGAGCTGCCACGTGGAGAAGCAACATGCGTGCGGGGTGTGCGGCAAGAAGTACGGCGACAGGCACAATCTGCGCCACCACGTGGAGAAGTACCACTCGGAGACGGACTTTGAGTGCGCGCTGTGCGAGAAGCGCTTCTACACCCGCAAGAGCCTCAACTACCACATGAAGTGGCACAATCCGGAGCGCCAGTTCAAGTGTCGCCACAGCGGCTGCGAGCGACTCTTCATCAGCCAGCGGCATCTCATGTGCCACGAGGCCACCCACTCGGGCACCAGCTCCCGGAAGAGCGAGCACTGCGGCTTCTGCGGCAAGACATTCATACATCTGAAGACCCTTCGCTGGCACATTTACAGGCAGCACGGCGGCGAGAAGCCCTACAAGTGTGCCAACTGCACGGAGGTCTTTGCATCCTATGCGGAGAAGAGGATTCACATGCTGGAGCGGCACAGGGAGAACCTAACGGCCATCGAGCGGAGTGAGTGCATGCTGTGCCGCCAGCCCTTCTCCAGCGAACCGGACTTGATCCTCCACATGTCCGCGGAGCATTTGCAGCGACCTGGAGCTCCGGTCATCGCGAACAACAAGCGGGTGCTGCAGCAGAAGCGGGAACGCCAGTACTCCGGACTCTTTCAGTGCGGCAGCTGCAGCCAGCGGTTCAACATGAAATCCGCTCTGGAGCGGCACGCCGCCGTGCATTCCGAGAAGGATCGACCGCACGCCTGTCCACACTGCTCCAAGCGGTTCAAGCGCGCCCAGGACATGAAGTGGCACATCAAGACGCACGAGAAGGAGAAGCCCAATGTTTGCGATGTTTGTGGCAAGGCCTTCGCCCTCAAGTATGTGCTCACCCAGCACCGGCTGAGTCATGAGGTCTTGGAGAAGAACTTCAAGTGCAACGTTTGCGGTCGAGCCTATCTGTTCGAGAAGTCATTGCGGCTGCATCAGCGAACTCACACGGGCAAAACCTACTACAAATGCGATCTCTGTCAGGAAAGATTTGTCACGCACATTAAGCTTAAGACTCACATGCAAAAGACACACGCCTCTCAGCCGCACGCGGCGGACCACCCTCTGGATGATCTGATCAACATTGTGATTTCCTAA
- Protein Sequence
- METCRTCAISMFVCDFESGVNNSHFLDLHHPNCWPSEMAQIRLQFANWNLKISPNDGLPQKICSDCFTKFCSINAFRVACQEAQLKLSNIYDKIDASSLEDEHHEDLEQAEEHQESETSKATSTVSAETQPNTASDPIEIFVDAVDIDEAEEQEQEEEEQQYDGELDESITEQSAPPELTISYACKFCLRPQESYQLQQLLLEHINASHDPEQPYNCPECEARFQDAASRTVHLKSCHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFECALCEKRFYTRKSLNYHMKWHNPERQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLILHMSAEHLQRPGAPVIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKTHASQPHAADHPLDDLINIVIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00491676;
- 90% Identity
- iTF_00592573;
- 80% Identity
- -