Basic Information

Gene Symbol
JARID2
Assembly
GCA_016746235.1
Location
CM028596.1:8957673-8966829[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-22 7.7e-19 67.7 0.0 6 89 1810 1891 1805 1891 0.92

Sequence Information

Coding Sequence
ATGGTTGTCTCCAAAGACAACAACAAGCGTCGCCGCAAGGAGACGGAGACGCCCCCACCGCCTCCGCCCGGCCCGCCCACTGCCTCCTCGCTGGCACCTCCGTCGGCGGTGGCGGCCATCGAGTCCTCGCCCGAAATGCCCAAGAGAACGAAGGTGCAGGCACAGCGCAAGTTTGCCCAAGGACAGAGTGCGCCCAGCAGCTCCTCCAGCATCGCCTACAGTGCAGCAGCAGCGGCAGCTGGATCCGGATCGGGGCCCAGCACCTCTGGAGCGGATAGCTCTCAGCCACCTATCGAGATCCTGCCCAACAAGTGTCCAAAGCCGCAGGACTTTCTTACCTTCCTATGCTTTCGTGGCACTCGCGCGTTGCCCGCCCACTTGGATTTCCTCAACCAGGGCAAGTCCAAGGATTCGGAAGCATCGACGACGGGAGCCAACAATAATAATAATGCAAGAAAGCCCAACAACAGCCGAGCGAGCTTGGCTGGCAACAAAAAGAAGCGGGGTCGTCCGGCTAAAGGAGCGGCCAAGAAGGTGGAAGTGATAGCCCCATTACCCGATCCCACTGAGAAACCCTCAACAGCTGAAAAAGCAGCTAGTGATAAAAACAATCTCATTTCAGCCGAAGCGCCTAAGATTCCCTCGCGAAATCCTACTCCTGTACTGCCAGGAGCGGTGCGAAAACGAGCGGAGGTTGTCACCGATGGTAATCGACGAGGAGCCAGAGGCAGAGGAGCAGGCATTTCCCCCGATAAGGGTGCACCGCTAGCATTATCCAACGACAGCAAGCGCCGCTCCAATCGTGCCACTACCAAGGAAAGTAAACCCATCATAGATGATGACCATTCAGAGGATCTCGAGGAACAAGAGGCAGATGACGATGAAGATGAGTTCTTCTCTGCTCACGATGCCACCTCGCGCAATGGCGAGGAAGTAAAGGCAGACAGTCCTGTAAAAGCGGAACCCACCAAAAGGGGACGACCCGCGGCAGCCAAGAAAGCTGCAGAGCCCGCGCCGGAAGCCCAGACAGCTCTAAAAGATAAGGCGCCCGTTAAGCGTGTAAGGCAACGGGAGTCGCCCATTTTTATACCCTCACCCGAGTCCTCCGGACGAATGACAAGGCAGAGGGCTTTTTTCGAGCCCGTTAAGGTTCCGCCGCACCAGGAGGAACCTGCAGCCCATGATTCCCCAAAAGATGAGCCCAAAAAGCAGCCTGAACGGCCACCAAGCAAAACCGAAAAGGAGCCCGAGCCTACCAAGCAAATAAAGGAAACCAAGGAGAAGACGAATTCCAGTATTTACGCCAAAGAAGCAAAGCAGCAGCTGGAGAATGGTGACAGTCAACATGGTGCGGCGGCGAAGGGAAAGAAAAGTCTGAATGTCTTTGATTTTAGTTCAGATGATGAGCAGCCCCTAGCAAAATCCATCAAGCTGAAAAAGGGCGGCAAAGGGGCGAGTCCCAAAAAAGGTGGAGCTGCTACAATTGCTCCGCCAGCCAGGAATCGCAAGGCAGCAGCTAAAAAATTAGAGAAGGAAAAGGAAATTGAGAAGGAGAAGCAAAGGGAGAAGGAAGAGGAGATTGAGAGAGATAAGGCCAAGGACAAAAAGGAAAAAGAAAAGGAGAAGGAAAAGGAGCCTGTGCCAGAGAGCAAAGTGGAGGAGCCACCTAGTGGAGGGAAAAGGGGAAAAGCTGGTAAAAAGAAAGCAGAGGATGCTCCAGCGGATGAGGAAGAATTGGCACCACCGTCCTCGAAAAAAGTCGCCACCAATGCTCGAGGATCTCGAAAGTCTGCGAAAAGCAAGGCTTCAGAGGATTCCGCGGAGCTAGAGCCTCAGAGATCGCAGCGCCCCTCCCGCAAAACCAAGGAAGCTGCGGCCATTTACATGGGCATCATTGGTCACAAACTGCAGCTGGCCGATGACGAGGAGGACGACCTGTCAATGAGCAGCTTTCCTGACATACCCAACGTGAAGGAAATGGAAAAGATGGAGAACGAGATCAAGCGTAATGCGGCGGGAAAGTTAAACGTGCCGGAGGCCTCGACGGTGCTTTCGGCAGGCAAATCAACCCGTAAGCCGTCGCCCCGACCTAAGGATTCGCCAGTTACAGCTCCAGTAGAAGTCACCCGCAACGCGTCCCCCTCCCCCCCAGAAGCCGAGGAGGAAAAGCCACCGCCCCCAGCCCGACGTGGCCGCCCACCTAAGCAGGGCAAGGCAAATGCCGGTCCAGCGCACAAACCGCCAATCGAGGGAATGCTGGTAAAGAAGGGCTCCCTGGCTAAGATGTCTGAGCAGCAGGCCAAGCCCAAAGCCAAGTCCGAACATTCGAAAGTCGACTCCGACGAGGAGGAGGACTTTCTCATCAACGAGGAGCTAAACGAAACCAAGCGCAAGCTAGAGAAGAGTTTCAGCGACTCGGATGACGAACCGCTGGCCATCAAGGTGCCCGTAGTTGCGGCAAAAGAGAAGGAAATATTGCCGCCAAAGATTGCCAGCCCACCGCCCAAATTGATGCCGGTTCCTTCACCCATCTCCGTGCCCACGCCTGCAGTTTCGGTCACTCCCTCGCTGACGGTGCCCAGTATACTACCGACTTCAACTGGCACCACTCAGCTGACTATGCTTCCGTTGACGGCAAAAGCTACATCCTCTTTGGGTTCCATGCCGATGTTTCCAAGCATTCAAGCAAGTTATTCGCCACTCAAACCCATGGAGAAGAAGCCGCCGGTGCCTACGTCCAAGATTCTGAACGTTCCCGCCACGTATGCACTGCCGGGAAGTGCTGGTGGGGCTGTGAGTTTTCAGAAAACCTCGTCGTATCTGCCGCAGGCATCGCCCCACTACCACTCCGGTTATGTGCGGCCACCACCTACGCCCACCCATCAGTTTGGAGGCGGAGCACCGTCTGGGAGTAAAACTCCCTCCCAGGGCTCATCGCCGATGAAGTACCAGACGCCACCGACAACTTATCCACCGCCCATCGAGGCGTATCAGTGTCCAAAAATTAATCCAAACTTTCTAACGCCTAAGTACGAGCGAAGCCCACTGCCCAGATCATCGACCAGCAGTTTTCCAAGTCCATCGCCGGTGAAGTTTCAACCAACATCGGGAACCACTGCTACCACCGTGGGCACACCATCGTCTGCCACTAAAAGCCCCTTGGCACCACCGCCGCCTTCTCCACCAGTCAGCCAGGTTGTGATCCAGACATCCAGCTTAAATCTTAGCATGAGTATTGCAGCTACAGTAAATAACGCACCAATGCCAGTGGCTTCCACGTCGGCAGCGGCAGCCCATCAGGCGACGGTTGCAGCCACAGTTACAGCCACTTCCACGCCACCGCCGGCGCACAGCAATAGTGCAGGAACGGGAGGAGGAGCCGTGGCCAATTCTGATCCTCTAAAAGACGAGATTGGGAGCATACTAGCGCAGGCCACGCTGATGCCCAGCAAAGAGGAGTCGGGCAAGATCTTCGGCATTGCCAGCGTTAGTTTGGCCCAGAGTTCTGGACCAGACAACACGAAATGCACTTTGGGAAAGTGCGGATCTATCCACAAGCCTGTGCTGGGGCCAGTGGTGCCCACGGAGGGTTACTTTGGCGACCAATTGTCTAGCAAGGAGCGGCGCAAGGCGAAGGTTAACATGACGCACGAACAGATTCAAAAATGGCTCATTGAGTGCTCATCCAACCCAGATGAAATCCAAGACGATTTGGATGACGATTTTGATGATAGTTTAAGGCCCCAGCAATCGACTACTCCTCCGCCCACGAGAGATGATAAAGAGCTTAGTGCAAGCTTTAGTTCATCATCGAAGAATACGCGTGGCGATCTTGGTAAGAGTGAGAGTGCCTGGTCCGCCAAGGGACCATCCCTGAAGGCCACTCCTGTGCTGGTCACTCCTCCCAGTCGCAAAGAACAACACGAGCAGGCGGATAGCAAGGACTGTGATGCTCTGGACTACGACAAATCCTCAACACCTGTGAATCTCACACAGAAGATCACATCCAATGAGTCTGTGGCTGTGGAAAAGAAAGCCAACGATCGAAAGGGCAAAGAGTCGGCAAAGGCCGCTGCATCTAAGGCTGCACCTCAGCCAAGAAGTACTGCTGCAACCCCGCCAACACCCATCTCTTCCACACCCACTCCCGCATCTCTCACGCCATCTAAGAGCAGCCCAACTCCACCGCCAGCTGTCAAGCAGAAACCGGAGAAGGGAAAGAGAAATGCCACTGCTGGCGGGGGAGCAACTATATTAGCTTCTGCGCCCGCAGCACCGAATCCTGCAAATCCGAAACGTACTCCAGTTTATAATCAAAAGAACGCTAAGGCGCAGCAGCAACAGGCGGAGACGAAACCGGCATCTAATCCTCCCAGTGGCGCAGGAACAAAACGAGAATCGGTCTATGCCTTTGGCAAAGAGGATGAGTCTGGCAACAAGTCGGGCAACCGGCGACGGGCTGATCCCAGTCCGGTTACTTCCCCAGCTCCCGTGGCCAATGCGCTAAGTGAGCGGTCTCCAACGAAAAAGAGAGCAGCAGCCGCAGCAGCAGCAACGGCAGTCCAACTAACGCTAAGTCCTACGGAGAACTGCAAGATCGAAGGCAAACCATCCAAGGCGGCCACAGGCAGAGGAGCCAAAAAGCAACAGCAACAAGCTCCGGCTCCACCAGCACCAGCCGTAGAAGCTGGTGGCGATTCAGATGCAGAGGGTGCCACCTTTTATATTCCCCTGCAAGGAGCTGGAGTGGGGGGCAGTGGTGATGGCGGCATTCAAGGCGTTGCAGTGAAGCTGGGACGAGAGGGCCCCGACGGCCCCAATCAGAAGGTGGTTATGCAGGCCACTCTGGTGACCAAGGCTCAAATGGATACCAACTCAAAGCCGCTGCCAGAGTCGCTGAATACCAACGAGCTGGTAAAGACGTTGCTCCATGCGGCCAGCAACGATGCGGCCTCAACGACTACAAGTCTTAAGAGCTTGCCCAAGGCGAGCACATCGGCAGCGGCGGGAGCAGCAGCAGGACCTGGTGCCTCCAGCTTGGTGCGCGTGAACTCCAACTCATCCCTATTTTCTGGCTCAGCTAAATCTCGTACGGCTGCCCAGACGAGCTCCACAGCAGCAGCCGTAGCCAAGAAGTACAAGGATGACACACCCATTAAGATGGCCAACAATACGGCCTTTCCGCGACACGATGATCCCACGCAAATGGTGGAGGCGCCCATCTTTCGACCAACGGAAAAGGAGTTTGCCGATCCCATTGAGTTTATCGAGCGCATCACACCAATTGCGGCCAGGTTTGGCATTTGTAAGATCATTCCACCGGCCAGCTTTAAGCCGGAATGCCGGATCTCGGATGAGATGCGCTTCACAGCTTACAATCAGTATGTGCACAAAATGCTCCACCGCTGGGGTCCAAGTGCCAAGGAGCTGAGTGCCATCAAGAAGTACCTGGCCACGCAAAGCATCGTTATGAATCACCCGCCTTGGATCGGTGGAATGGAGGTCGATTTGCCTCGATTGTATCACACGGTCCAGGAGCTGGGAGGTCTTAAGGAAGTAATCGAGAAGAAGAAGTGGGCACGCGTGGCGGAGGAAATGTGCATACCCAAGCTAGCTCAAGATCGGGTGACCAAGCTGGACGACATATACTGCAAGTACCTGCTGCCATACGATACCTTGTCACCGGCAGAGCGACAGAAGCTCTTTGACGAGGTGGAGGCCGACTGGGCTAAGCGGGAGGCACGGGCTCGTCGGAATGCGGATCGCTTTGTGAACACGGAGAGCGTGTCCAACGAGGAGGACGATCTGAGCAGCGACGAGGACGAAGAGTCCGAGGAGGAGATAGACGGCGTGTCCATGGAATGCATCGTGAAGGGGAGAAGTATGCCACTAAGCCAGTTTTATAGGATTGCCCGTAATACGATGGCGTTGTGGTTCAAAAGCACTGATCCCACGGTCAACGAGGTGGAAGCGGAGTTCTGGCGGCATGTGGCCGTCCGCGACAGCCATGTGTGCGTTCATTCGGGCTCCATTGACAGCTCAGGCTGGGGCTATGGCTTCCCTAGTCCAGGACCCAAGGGAAAAGGTTCAAACTATGCCAGGCATCCTTGGAATCTGAAGGTGTTGACCAATAATTCAGGTTCTGTGCTGCGATCCTTGGGTCCTGTTATGGGCGTAACTGTTCCCACGCTTCACGTGGGCATGCTTTTCTCCGCCTGCTGCTGGTACAGGGATCCGCATGGCCTGTCATGGATCGAGTACCTGCACACCGGTGCCTCCAAGCTGTGGTATGGAATTCCCGATGATCAGAGTGCGAACTTCAGAGCGGCTCTTACGTCGCTGATTCCGACGCACTGCCAGAACAAGACAATCTGGCTGCCCTGTGATACGGTGATGGTGCCGCCGCACATGCTCACAGATCGAGGGGTGTCACTGTGCCGCATCGAACAGAAGCCAGGCGAGTTTATTGTGGTTTTCCCACGGGCCTATACCTCAAGCCTGGCCACAGGATATGTGGTCTCCGAGAGCGTTTACTTCGCCACAATGTCCTGGTTGGATTTGGCCAAAGATGATTTCAGGGACATCCATGAAAGCTGTGAGCCAGCTATGTTCTCGTTGGAACAGCTGCTGTTTGCCTTGGGTTATGACCAGCGGGTCAACTCCGAAGCCCTGCATCAAATGTTGCCAATGCTAAATGACGTTTGCGAAAAGGAATCCGCTGCCCGAGAACAGCTTAGGGCTGCTGGTGTGACGTCCACCGAAAAAGTGCAGGCGGAAAAAGGTCAAAAGGCCAAGAAGCAGCAACAGCCGCCATACAAGTCCATCGAGAGCGAATGTGACCTGTGCCGCGCCAACCTGTATATATCGATGGTTCGCACCGAGGATGGCAACATCTACTGCCTGCAACATGCGTTGAAAAACCTTAACAACGGCAACATCCAGGCCAAGCAATGCAAGTTAATCTACGCGTACAACGTGGATGATATACAACAGCTTATACGGCAACTGCAGGAGAAGATCAACCATAAGGCAGCCGTAAAGAAAAAGTAG
Protein Sequence
MVVSKDNNKRRRKETETPPPPPPGPPTASSLAPPSAVAAIESSPEMPKRTKVQAQRKFAQGQSAPSSSSSIAYSAAAAAAGSGSGPSTSGADSSQPPIEILPNKCPKPQDFLTFLCFRGTRALPAHLDFLNQGKSKDSEASTTGANNNNNARKPNNSRASLAGNKKKRGRPAKGAAKKVEVIAPLPDPTEKPSTAEKAASDKNNLISAEAPKIPSRNPTPVLPGAVRKRAEVVTDGNRRGARGRGAGISPDKGAPLALSNDSKRRSNRATTKESKPIIDDDHSEDLEEQEADDDEDEFFSAHDATSRNGEEVKADSPVKAEPTKRGRPAAAKKAAEPAPEAQTALKDKAPVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVPPHQEEPAAHDSPKDEPKKQPERPPSKTEKEPEPTKQIKETKEKTNSSIYAKEAKQQLENGDSQHGAAAKGKKSLNVFDFSSDDEQPLAKSIKLKKGGKGASPKKGGAATIAPPARNRKAAAKKLEKEKEIEKEKQREKEEEIERDKAKDKKEKEKEKEKEPVPESKVEEPPSGGKRGKAGKKKAEDAPADEEELAPPSSKKVATNARGSRKSAKSKASEDSAELEPQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEEDDLSMSSFPDIPNVKEMEKMENEIKRNAAGKLNVPEASTVLSAGKSTRKPSPRPKDSPVTAPVEVTRNASPSPPEAEEEKPPPPARRGRPPKQGKANAGPAHKPPIEGMLVKKGSLAKMSEQQAKPKAKSEHSKVDSDEEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPVVAAKEKEILPPKIASPPPKLMPVPSPISVPTPAVSVTPSLTVPSILPTSTGTTQLTMLPLTAKATSSLGSMPMFPSIQASYSPLKPMEKKPPVPTSKILNVPATYALPGSAGGAVSFQKTSSYLPQASPHYHSGYVRPPPTPTHQFGGGAPSGSKTPSQGSSPMKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSPLPRSSTSSFPSPSPVKFQPTSGTTATTVGTPSSATKSPLAPPPPSPPVSQVVIQTSSLNLSMSIAATVNNAPMPVASTSAAAAHQATVAATVTATSTPPPAHSNSAGTGGGAVANSDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDSLRPQQSTTPPPTRDDKELSASFSSSSKNTRGDLGKSESAWSAKGPSLKATPVLVTPPSRKEQHEQADSKDCDALDYDKSSTPVNLTQKITSNESVAVEKKANDRKGKESAKAAASKAAPQPRSTAATPPTPISSTPTPASLTPSKSSPTPPPAVKQKPEKGKRNATAGGGATILASAPAAPNPANPKRTPVYNQKNAKAQQQQAETKPASNPPSGAGTKRESVYAFGKEDESGNKSGNRRRADPSPVTSPAPVANALSERSPTKKRAAAAAAATAVQLTLSPTENCKIEGKPSKAATGRGAKKQQQQAPAPPAPAVEAGGDSDAEGATFYIPLQGAGVGGSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPESLNTNELVKTLLHAASNDAASTTTSLKSLPKASTSAAAGAAAGPGASSLVRVNSNSSLFSGSAKSRTAAQTSSTAAAVAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDLSSDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNSGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQMLPMLNDVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMVRTEDGNIYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKINHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00491299;
90% Identity
iTF_00505189;
80% Identity
-