Basic Information

Gene Symbol
Ubp1
Assembly
GCA_016746235.1
Location
CM028594.1:17998370-18011772[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3 1e+04 -4.7 1.8 95 107 52 64 27 115 0.51
2 3 7e-53 5.7e-49 166.2 0.1 25 187 390 549 378 557 0.92
3 3 1.5e-13 1.2e-09 37.6 0.8 187 222 587 622 580 623 0.89

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCCCAAAACTCCGGTCTGTTGGATTTACAAAGCATATTCGACCCACAATATTCTCATCATCAACAACAACAAGAACATTTGAGCCACCACCCTCAACATCTCACTCAACAACATCAAAATCAACAACTACAACAACAAGCGGAGCAGATTCAACAACATCAACAACAACGCACCCTTCCAACAAAGTTCGATTTGAACCTGTTCAACGAACTCGACCAAATGGAATTCAACAACTTAAACCGCAGTCAATATCAGAATAATAATAATAATAACAATATCAGCAATAATCAAAACTCCAACAACAACAGCAACACCACTAACGGTATTAGTGAAAATCTAAATCAGATCCAAAACCGCCACTTCATTAGCGGCTACCATCACCAGCATATCGGTTCGGACTATGAGCAAGTGATCAACTTTGTTGATTCGCCGCCAAACTCAGAGGAATCGTGGACAGAGAGCAGCTCGCTAATCGAACAAATTACGATTGTCGTAGACGGACAGTCAAAGGACTCGCCGGGACCGCAAATCATCGACGTGCAGACCATTTTCCTGAACAGCGGCTCACGCAAAAGACGAATGGATTGGGACTCTTTGGACATTGGCCAAACTGAGAACTCACCCACAGCATCGCAGAGCGGCGAGCTGCCCACCAAAGTGGCCCATCAGGAGAAGGACAAGCACAAGCGCGAGAAGCACTCGGGTCGCAGCAGCTGGAGCGATGATATCGGCTTCGATCTGAACGCCGAGTTTAACAGCAACTCGTACTTGAACAATGAGAACTTCCTGTCGTTCTCCCCTACGCTGACCACCCTGAAGCAGGAGCCACAGACGGAGCAGATCAAGCCGAGCCCCAAGGCATCCCTGGACAATGCCGCAGCATCGCCTTCCATCGCCATTGCCAAATTGGATGAGGTCCAGAACTCTCCGCCGCAGGCTATTCCTGGCCAGGATTCGGCTAACGGATCTGGATCGGCCGGCAACGGCAAGCATGACGTAAACTCCGGACTCGCCTGCGGGTGTGGCTCTCCTCAGGGTTCACCATTAGCCAACGCGGAGTATGAGTTGAACGAAAAGGGAAAGCCGCAGCAACTTAGCGTTTTGGATCCAGCTAAAATAGAGATAGGTTCGGCCAACGGAGCTACCCATGCTGATGATCACAAATTTCAGTACATTTTAGCAGCAGCCACTTCGATTGCCACCAAGAACAATGAGGAGACTTTGACGTACCTCAACCAAGGCCAGAGCTACGAAATAAAGCTGAAGAAGATCGGAGACCTGTCCCTCTACAGGGATAAAATACTGAAGAGCGTGATCAAGATCTGCTTCCACGAGCGTCGCCTGCAGTTCATGGAGCGCGAGCAGATGCAGCAATGGCAGCAATCCCGCCCAGGCGAACGCATCATTGAGGTGGACGTACCGCTCTCGTACGGCCTCTGCCACGTGTCGCAGCCACTGAGCTCCGGCTCACTGAACACTGTCGAGATCTTCTGGGACCCACTGAAGGAGGTCGGCGTTTACATCAAGGTCAACTGCATTTCAACCGAATTTACCCCAAAGAAACACGGCGGAGAAAAGGGTGTGCCCTTCCGACTGCAAATTGAAACCTATATAGAAAACACAAACAGTGCCACCGCCAGCGGCTCGAGCGGCAGCAACAACAGCGCCAGCGGCAGCGCCAGCGGAAACAGTGGCTCCACTGCTCCAGCATCACCGGAACGGACTCCCAGTGGCAGCAATGGCAAACAAGCGGTCCACGCAGCTGCCTGCCAGATCAAGGTTTTCAAGCTAAAGGGAGCTGACCGCAAACATAAACAGGATCGGGAGAAGATCCAGAAGCGGCCTCAATCGGAGCAGGAGAAGTTCCAGCCCAGCTACGAGTGTACCATCATGAACGACATATCCCTGGATCTGGTGATGTCCGCCACCACTACTGGCTGCTACAGCCCCGAATATATGAAACTTTGGCCAAACTCGCCCGTGCATATACCCAAGTACGATGGAATACTTCCGTTTGCGCCAAGTGCAGCTTCGCCGGCTACCAGCAGCAGCCCCATAGCCATCAACTCGGTGACATCGACCAACTCGCCCACCCTCAAGCTGATGGACACCACAAACATGGTCTCACCGCAGCATGTGCCCGCTGACATAGACGATTATAGCCAGAACATAATGCCGGAATCGACGCCCTTACAAGTGACGCAGTGGCTGACCAATCATCGCCTCACGGCCTATCTCTCAACGTTCGCACAGTTCTCGGGAGCGGATATCATGCGCATGTCCAAGGAGGATTTGATTCAAATTTGCGGCCTGGCCGATGGTATTCGCATGTTCAACATTTTGCGCGCCAAGACTATTGCTCCCAGGCTAACCTTGTACGCCAGCTTGGATGGCTGCAGCTACAATGCCATCTACTTGTTGTCGAACACGGCCAAGGAGCTGCAGCAGAAGCTGTTCAAGATGCCAGGCTTCTACGAGTTCATGGCCAAGGCCAGTGCACAGGAGAACGGAGCCGGTGGTGCAGCCAATGCAGCTGCTGCAGCCCTCTTCAACAATTGGGGGATGCATTCCAAGTACTCGGGCAGCGGCTCCAATATCTTCAACGACGCCAACAAGAGCTGCGTATACATATCGGGGCCATCTGGCATTCTTGTGACCGTCACCGATGAGGTGCTGAACAACGAGATCAAGGATGGCAGCCTCTACGCAATGGAGGTGCAGGCCGGCAAGGTGATCCTTAAGCTGATCAACAAGCAGGACAACAACTAA
Protein Sequence
MALSFLSQNSGLLDLQSIFDPQYSHHQQQQEHLSHHPQHLTQQHQNQQLQQQAEQIQQHQQQRTLPTKFDLNLFNELDQMEFNNLNRSQYQNNNNNNNISNNQNSNNNSNTTNGISENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTESSSLIEQITIVVDGQSKDSPGPQIIDVQTIFLNSGSRKRRMDWDSLDIGQTENSPTASQSGELPTKVAHQEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPTLTTLKQEPQTEQIKPSPKASLDNAAASPSIAIAKLDEVQNSPPQAIPGQDSANGSGSAGNGKHDVNSGLACGCGSPQGSPLANAEYELNEKGKPQQLSVLDPAKIEIGSANGATHADDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGERIIEVDVPLSYGLCHVSQPLSSGSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNSATASGSSGSNNSASGSASGNSGSTAPASPERTPSGSNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLVMSATTTGCYSPEYMKLWPNSPVHIPKYDGILPFAPSAASPATSSSPIAINSVTSTNSPTLKLMDTTNMVSPQHVPADIDDYSQNIMPESTPLQVTQWLTNHRLTAYLSTFAQFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASLDGCSYNAIYLLSNTAKELQQKLFKMPGFYEFMAKASAQENGAGGAANAAAAALFNNWGMHSKYSGSGSNIFNDANKSCVYISGPSGILVTVTDEVLNNEIKDGSLYAMEVQAGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00489142;
90% Identity
iTF_00592158;
80% Identity
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