Basic Information

Insect: Drosophila tanythrix
Gene Symbol: -
Assembly: GCA_035043275.1
Location: JAWNNC010000517.1:10820892-10824890[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0033 0.23 12.1 0.6 2 23 244 266 243 266 0.94

2 9 0.014 0.96 10.2 4.6 2 23 394 416 394 416 0.91

3 9 0.0068 0.48 11.1 2.3 3 23 499 520 497 520 0.94

4 9 0.00034 0.024 15.2 0.7 2 23 752 774 751 774 0.96

5 9 0.1 7 7.5 0.1 2 23 820 842 819 842 0.89

6 9 0.011 0.75 10.5 3.6 2 23 889 911 888 911 0.96

7 9 0.1 7.3 7.4 4.2 2 23 925 947 924 947 0.92

8 9 0.004 0.28 11.9 0.3 3 23 1011 1032 1010 1032 0.96

9 9 0.048 3.4 8.5 0.6 1 23 1116 1138 1116 1138 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0033	0.23	12.1	0.6	2	23	244	266	243	266	0.94
2	9	0.014	0.96	10.2	4.6	2	23	394	416	394	416	0.91
3	9	0.0068	0.48	11.1	2.3	3	23	499	520	497	520	0.94
4	9	0.00034	0.024	15.2	0.7	2	23	752	774	751	774	0.96
5	9	0.1	7	7.5	0.1	2	23	820	842	819	842	0.89
6	9	0.011	0.75	10.5	3.6	2	23	889	911	888	911	0.96
7	9	0.1	7.3	7.4	4.2	2	23	925	947	924	947	0.92
8	9	0.004	0.28	11.9	0.3	3	23	1011	1032	1010	1032	0.96
9	9	0.048	3.4	8.5	0.6	1	23	1116	1138	1116	1138	0.99

Sequence Information

Coding Sequence: ATGGCCGCATCCATATATGCCACCCCACCGCCAGATCTGAGCAGCGAAGACACTGCGCTCTCCGATGTCTCCAACTCATCCACACTCAACACAAATCGCGGAGGcggcagcagtaacaacagcagcagcaacacagacaaccatagcaacaaaaacaacaataacagtcaCACATTGCAGCCAAATGAAGCCACAGCagacgcaacaacagcagccacaacaacaacatcagcagcggcaacaacagcaacaacatcaacaatgtCACCCACTCAACAGCAACTTCTGGACACGgagccaaagtcaaagccGGGAAGCAACATAAATGAAGAAGACATCACCGAGGACGAGGCTGACGGTGAAGGGGAAGCGGATTCAACGGCAATGGCCGCGAtggcagcaaatgcagcagccatgcagctgcaactgttggaGGCACTGAACGATGCGGCAAAAAAGCGACGCAAACAACACAATCCCAGTCGTCTTGAGGCGCTCAATTTGAGCGGTGCCGAGACGGAAGAGGGGGCATTGGAGTCGGCGCCAAATGCTGTTGTCGACTACGAGGAGAAGCTGTCGAAAATGCTTCTTCCCAAGTCCATTGAGAAGCTGAAGGAGACATTcgagctgttgcagcagcaaaagctgcagcCAGAAGACATATCAGATGCGgaggaaaaacaacagcaacaacaacaggatcAATCGATGGTGAACCCCTATCAGACCTATTGCAAGCAGTGTGGCGAGAACTTTGAGACAGAGTTCAAGCTCAGTTTGCACATGTTGCAGGATCATCAACCGCAGCAtcaacaggaacagcagcaacagttatCCACGGACGACCCCATGGATTTGTTATCCTCGATTAAAGTAAAACTGGAACGCGCTGATAGTCCCACTCAGCAGgagctacagcagcagcaacagcagctggagctaACGAATGgtcacagcaacagcaacaaggagcACGAACTCTGGCTGCAGGCAATGGctcaacaacatcatcagcaacagcagcaacatcaacagcagtcTGGACTTCCAGGAATGCCGCCCGCTTTTGCGTTTCCCCCAGAGGCAGCTGCTCTGGGCTGGCCACTACTGGGCATGCCTGGCTTTCCCGGCGTCGAGGGTCTCAATCGTCCACCGTTGCGCATCTTTAATCCTGAAGCCTACTGCGAGCTGTGCAACAAGGAGTTCTGCAACAAATACTTTCTCAAGACGCACAAGGCCAACAAACATGGTATCTTTGATCCTGCCGGTGATTTGGCCAGCACGCCAAACAACAATATCagcaacatgaacaacaacaacagcaacagtaacaacaaccacaacggcagcagcagcagcaacaacaatgtcagcagcagtagcagcagctccaCTTCCATGTTtcaacagctgcaaatgcCACGCGAggcgccaccaccaccaccacaaaaACCAGAGCCACAGCTtacaccaccagcaccaccagcggTACACTGCGACATCTGTTCCAAGCGCTTTACCAACATCTTTGCCATGCGTCGTCATCGCGCCAAGCAGCACGAACAGTCCCCGGCCACTGCCTCACCAACGCCCCAAGCGCGTCGTGGCAGCCCCAATGAGCAGCAAACTCCTGTCCAGACGCAGTCTGTGAAGTTAGAACCACAAACGGATGCGCAGTCCGGACCTGAAATAAAGCCGTATCAGTTGCCGGATGGATTTCGTGAGGATTTCACACTCGAACAGGAGGAGCTTTCGTTTGCGCCGCCTCCGCGAAAGCTGCCagcacagctgcagcagcaggtaCGTGAATCAAACTGCGCTCCGGACAAGCTACGGCGATTGGGTGTACTGCTGCCGGAAGCGTTCTGTGAGCTGTGCTGCAAGGAGTACGCAAACAGATACTTCCTGCGCACGCACAAATGGAAGCGGCACGGCGTTTTTGTGCCACCCGAGGATCTACAGCTGGGCGGCAAAGAGGAGCAGCCACAAATGCCTGCCGGCTGGCCTTTTATGCCTCTCAATCTAATGCTGGCCAAGGCAGCTGCggagcaggaacagcagccGGAGCAAGAGAATCAAAATGACGACGAGCTGTTGCTCGAGGAGCAGCCTAGCAAGCGCATCAAACTAGAACCCTACGACGAGTCGATGCCAGCAGAAAAAGTCGACAACTCAGTGATGGGATTGCAAAATCTCCAAAAGTTGCAATcgatgctgcagcagctcaacGATTTCAATGGCAAGAGACCGCTCCCCTGTCATCTTTGCGGACGCGAGCTGGAGCATCAATATGCACTGCGTGCGCATCTTATGACGGAACACGCCAGTCAACTGTTGCCCGAAGGACATCCCATGCTctaccagcaacagcagcaacagttgccgcttAAGCTGTCGCCAGTGGGTGGTGGTTCACCGacagcagctgcggctgccacgcccaccccCAATGAGCTCCGCTGCCAGCCGTGCGAGCGTGAGTTTGCCAACAGTCAGGAATTCAAGCAACATATCGCCGATGTGCATCTGGGCCGCATcccaaccagcagcagcagcccttTGCGCGAGGGCTTTTACACGCCGGAGCGTGCAACAGTTCCTCCGATGGCCGGTGCTCCTCCAGGACCACCACGGGGTGCTTATACGATCACACCGACGTCCAGCTACTGTGAGATCTGCAACAAGGAGCTGTGCAACAAGTATTTCATGAAGACGCACATGCAACGAATGCACGGCATTGAGATCGAGAATGGCGCCCAAATTGGCGGCGTtgtgtgcaacatttgcaacaagGAGCTGTGCAGTAAGTACTTTCTACGCGTGCACAAACATAATACGCATGGGATTATCGAGGATGGAGCGCCACTACCCCAGCCACGTGACCAAAACAGCGCACAGAACGGGATTAAAGCAGAtacccaacagcagcaacaacagcagcagcaacagcagcagcaacagcaacagttgctggaACCGGAGGTGAATTTAACAACACTCCCTAGCGACTCTAGTGCTCCTAATGAGCTGTGCCCACTGTGCGCTCGTCAGTTCCGCAGCGCCAAGTGGTTGCGAACTCATCTGATGAACGAACATGGAGCCGCAGGTGTGGAGAAGCTGCGTGAGCTGgaattgcaacaacagcagccacccAGTTCTGCCGGCAGTAAGCCCAACAGTCCCACTCTCAAGATACCCAACGGAAATCCGACTGGCGCCAATAATCTAGCACAGGCGCTGCAGAATGCACAACAGCAGCTCTTTGGACAGATGCAGTTGCCCAAAGGAATGCCGCTTCCCTTGCCGCTCCCTGGCATGTTTGAGCAGACGCCGCGTTTCAAGGAGTACCAGTGCTCCTTGTGCCCGTTCACCACGCCCTATTATGCATTCCTCTTTATACACGAACGCTCGCATGCATTGCTTAATACTGAGGAGACCCATGTGGGCGCCGAAGCGGAACTACCACGCAACGACAGGGACCGATCCTTTGCTTTGGTACAGGGCAAGGCTAGAACCAAGCCTAGCAAAGAGCGTGCCGATGTGGAGATCGAACCAACGAACCtaaccaccaacaacagcagctcaaAGACAGCGACGCCCACAACGTTACCCTCACCAggtgcaattgcaattgttgctagCTCACCCAAAGTCCGATCCGCGACAGTAACGCCCATACCACGACGACGCAGCACCACCAataccaacaccaccaccaccacctcaCCCAAGCCCGAAACGCCAAACGGCCTTGGCGCTCAACGTTCGGCGGCCACTTCACCCTTTGAGATGTGTAGCGATCTGGCGAATGGCAGTGGTAAACCCGCCAGCTATGCACAGCCAGACAAGGCCGAGGAGGCATATCAGATGCAGGCCTTCCATTTGGCGCCTGCTGATGCCGATGCTGAGGGCTTGTTTGCGCCAGCGCTCGTCTATTTGCCGGTACGAGTGCGGGCCTCCGAATCGACAACATTCAGCTTTAGGTTGACACCAGCCTAA
Protein Sequence: MAASIYATPPPDLSSEDTALSDVSNSSTLNTNRGGGSSNNSSSNTDNHSNKNNNNSHTLQPNEATADATTAATTTTSAAATTATTSTMSPTQQQLLDTEPKSKPGSNINEEDITEDEADGEGEADSTAMAAMAANAAAMQLQLLEALNDAAKKRRKQHNPSRLEALNLSGAETEEGALESAPNAVVDYEEKLSKMLLPKSIEKLKETFELLQQQKLQPEDISDAEEKQQQQQQDQSMVNPYQTYCKQCGENFETEFKLSLHMLQDHQPQHQQEQQQQLSTDDPMDLLSSIKVKLERADSPTQQELQQQQQQLELTNGHSNSNKEHELWLQAMAQQHHQQQQQHQQQSGLPGMPPAFAFPPEAAALGWPLLGMPGFPGVEGLNRPPLRIFNPEAYCELCNKEFCNKYFLKTHKANKHGIFDPAGDLASTPNNNISNMNNNNSNSNNNHNGSSSSNNNVSSSSSSSTSMFQQLQMPREAPPPPPQKPEPQLTPPAPPAVHCDICSKRFTNIFAMRRHRAKQHEQSPATASPTPQARRGSPNEQQTPVQTQSVKLEPQTDAQSGPEIKPYQLPDGFREDFTLEQEELSFAPPPRKLPAQLQQQVRESNCAPDKLRRLGVLLPEAFCELCCKEYANRYFLRTHKWKRHGVFVPPEDLQLGGKEEQPQMPAGWPFMPLNLMLAKAAAEQEQQPEQENQNDDELLLEEQPSKRIKLEPYDESMPAEKVDNSVMGLQNLQKLQSMLQQLNDFNGKRPLPCHLCGRELEHQYALRAHLMTEHASQLLPEGHPMLYQQQQQQLPLKLSPVGGGSPTAAAAATPTPNELRCQPCEREFANSQEFKQHIADVHLGRIPTSSSSPLREGFYTPERATVPPMAGAPPGPPRGAYTITPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVVCNICNKELCSKYFLRVHKHNTHGIIEDGAPLPQPRDQNSAQNGIKADTQQQQQQQQQQQQQQQQLLEPEVNLTTLPSDSSAPNELCPLCARQFRSAKWLRTHLMNEHGAAGVEKLRELELQQQQPPSSAGSKPNSPTLKIPNGNPTGANNLAQALQNAQQQLFGQMQLPKGMPLPLPLPGMFEQTPRFKEYQCSLCPFTTPYYAFLFIHERSHALLNTEETHVGAEAELPRNDRDRSFALVQGKARTKPSKERADVEIEPTNLTTNNSSSKTATPTTLPSPGAIAIVASSPKVRSATVTPIPRRRSTTNTNTTTTTSPKPETPNGLGAQRSAATSPFEMCSDLANGSGKPASYAQPDKAEEAYQMQAFHLAPADADAEGLFAPALVYLPVRVRASESTTFSFRLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00499185;
90% Identity: iTF_00616490;
80% Identity: -