Basic Information

Insect: Drosophila tanythrix
Gene Symbol: -
Assembly: GCA_035043275.1
Location: JAWNNC010000517.1:18761224-18763726[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.025 1.8 9.3 3.8 1 23 261 283 261 283 0.98

2 11 9.6e-06 0.00067 20.1 0.5 1 23 289 311 289 311 0.99

3 11 0.0002 0.014 16.0 2.5 1 23 317 340 317 340 0.97

4 11 0.36 25 5.7 3.8 1 20 346 365 346 368 0.95

5 11 0.0087 0.61 10.8 1.7 1 23 374 396 374 396 0.97

6 11 4e-05 0.0028 18.1 1.2 1 23 402 424 402 424 0.98

7 11 0.00013 0.0094 16.5 1.2 1 23 432 455 432 455 0.96

8 11 0.002 0.14 12.8 0.4 2 23 462 483 461 483 0.97

9 11 0.0018 0.13 13.0 1.2 1 23 489 511 489 511 0.98

10 11 1.9e-05 0.0013 19.2 1.4 1 23 517 540 517 540 0.96

11 11 4e-07 2.8e-05 24.5 3.3 1 23 554 576 554 576 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.025	1.8	9.3	3.8	1	23	261	283	261	283	0.98
2	11	9.6e-06	0.00067	20.1	0.5	1	23	289	311	289	311	0.99
3	11	0.0002	0.014	16.0	2.5	1	23	317	340	317	340	0.97
4	11	0.36	25	5.7	3.8	1	20	346	365	346	368	0.95
5	11	0.0087	0.61	10.8	1.7	1	23	374	396	374	396	0.97
6	11	4e-05	0.0028	18.1	1.2	1	23	402	424	402	424	0.98
7	11	0.00013	0.0094	16.5	1.2	1	23	432	455	432	455	0.96
8	11	0.002	0.14	12.8	0.4	2	23	462	483	461	483	0.97
9	11	0.0018	0.13	13.0	1.2	1	23	489	511	489	511	0.98
10	11	1.9e-05	0.0013	19.2	1.4	1	23	517	540	517	540	0.96
11	11	4e-07	2.8e-05	24.5	3.3	1	23	554	576	554	576	0.97

Sequence Information

Coding Sequence: ATGTCAAAACGCACGCGCGATGCCGATTCAGAGGATTTGCAGTCCTTTTTAGCCAATTTTCACGAGGATATAGATGCGGGCAACGCTGATGCCAACGATGCCAAGTCAAATGCCGCCTTCAGAAGAGAACAAGAAGAACGCCAGGACGAAGAAGAGgacgatgttgatgatgaagatgatgacgatgatgacaaGTACTTTATTGATGACGAAGGCAACTGTTATATCAAAACTACGCccaagaagcagcaacagattaaaaagaaattaaaaccACAAACAGCCTCTTCAAGTGCATCCGCAGCATCTGTTGCAATACGCAGCGCTAGCCGTGCAATTCCAAAAGcTATCAACCTGCGTCCAGCCAAGCCCAAAGCGGAGCAGTCACAGAATAAACCCAAAGCAATTAGCATACGTCCGGCTACACCAAAAAGGTCCCCCAATAAGCAAACTTCACCATCAGCAGTTAGCGCGCCCCGAGCTTATTTACGTTCCGCAAAAGGCAAAGCCAAACGACCGGATTCGGAGACGATAAACAAAGTGGTGATAGAGAAAGTGGAGGATATTGAGGAGCTTGCAGATGATCCGGCCGAAGCTAATGTGAGCACTGGTTCTATTGTCGATCTCAGCACAAGTAAAGACAACAATTCCGATGATGAGATCTACGAATTTGATGACAATGCGGCAAATGTGTCCACCCGATCGGATGTGGACTTTGTGCTAAGCGGTAACCAATACAAGCTGAAGCCGGTGGCAGCCAATGCGTCTGCAGCGCAAAAATATGCCTGCTCCCATTGCAGCTATACGACCAGCAAGAAATTCCTAATCTCACGGCATGTGCGCTCCCACGACGCCGAACTCTCTTACAAGTGTTCGATTTGTGAGCGCGGCTTCAAGTCCAACATGGGTCTGGTGAATCACCTGAACACGCACATGGGCAACAAGCCGCACAAATGCAAACTCTGCGAGAGCGCCTTTACCACCAGTGGCGAACTGATACGCCACACACGCTACAAACACACCAAGGAGAAGCCGCACAAGTGCACCGAGTGCAGCTACGCCAGCGTTGAATTAACCAAGCTGCGTCGTCACATGACTTGCCACACGGGCGAACGTCCGTATCAGTGTCCGCACTGCACATACGCCTCGCAGGATATGTTCAAGCTAAAGCGGCACCTGGTCATCCATACGGGCGAGAAGAAATACCAATGCGACATCTGCAAGTCACGCTTCACACAATCCAACTCACTCAAGGCGCACAAGCTGATCCACAGCGTGGTGGACAAGCCCGTCTTTCAGTGTACTCTTTGTCCCACGACATGCGGCCGCAAAGCGGACCTGCGCACCCACATGGCCAACATGCACACCTCAGAGAAGCCGCTCGTCTGCAAGCGTTGCGGCCAGGAGCTGCCCGATCGCTATCAGTACAAGCTGCACATTAAGTCACACGAGGGCGAGAAATGCTATCGATGCAGTCTCTGCAGCTATGCGTCGGTATCTCAGCGGCATCTTGACTCGCACATGCTGATACACACCGACACCAAGCCCTACAAGTGTGATCTGTGCACCCAGACGTTCAGGCAACGTCAGCTGCTGCGTCGTCATGTAAATCTAATCCACAACGAGGACTATAAGGCGCCGGAGCCGCGCGAGAAGATGCACTCCTGTCCCAGCTGCGATCGTGTCTTCACCCACAAGGGTAATCTGATGCGGCACATGGAGACACACGATGATACATTGAATGCGCGCGAAGAGAAACTAAAACTCAAAATGGGGCGTAATGTGCGCTTGCAGCCGGACGGTACAATTGTGACTTTGGTCAATGGCAACGATATCGATTCGTTGGACAAAAACGACGGCGCTTCGATTGACATCGATGAGCAGTATGAGCTTACTGAGATCCAGGAAATCGAAGTTGAGGAcgaggaggcggaggcggaggaaCTGCCGAGCAAAGTTATTATGGAGACGATTGCCACTAAACCTAACCTTAGATCGAGAAGCGTTAACAAACCGATCGGTAAAAGAGAGCGCGAGCAGAGCTCGTCCAGCGGCACCTTCCGCATCAAGGAGGAGCTGGAAGCCAACGAGTTCACCGTGGAGCCGCAGGGTGACGATGCTCAGTTACGTGCAGAGTTTCTGCAGCTAATGGACATGATTGAGCAGGAAGCTGAGAATTGA
Protein Sequence: MSKRTRDADSEDLQSFLANFHEDIDAGNADANDAKSNAAFRREQEERQDEEEDDVDDEDDDDDDKYFIDDEGNCYIKTTPKKQQQIKKKLKPQTASSSASAASVAIRSASRAIPKAINLRPAKPKAEQSQNKPKAISIRPATPKRSPNKQTSPSAVSAPRAYLRSAKGKAKRPDSETINKVVIEKVEDIEELADDPAEANVSTGSIVDLSTSKDNNSDDEIYEFDDNAANVSTRSDVDFVLSGNQYKLKPVAANASAAQKYACSHCSYTTSKKFLISRHVRSHDAELSYKCSICERGFKSNMGLVNHLNTHMGNKPHKCKLCESAFTTSGELIRHTRYKHTKEKPHKCTECSYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHLVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCTLCPTTCGRKADLRTHMANMHTSEKPLVCKRCGQELPDRYQYKLHIKSHEGEKCYRCSLCSYASVSQRHLDSHMLIHTDTKPYKCDLCTQTFRQRQLLRRHVNLIHNEDYKAPEPREKMHSCPSCDRVFTHKGNLMRHMETHDDTLNAREEKLKLKMGRNVRLQPDGTIVTLVNGNDIDSLDKNDGASIDIDEQYELTEIQEIEVEDEEAEAEELPSKVIMETIATKPNLRSRSVNKPIGKREREQSSSSGTFRIKEELEANEFTVEPQGDDAQLRAEFLQLMDMIEQEAEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00525327;
90% Identity: iTF_00495286;
80% Identity: -