Dtan004875.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila tanythrix
Gene Symbol
lov
Assembly
GCA_035043275.1
Location
JAWNNC010000467.1:8566423-8578675[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-18 2.5e-15 56.0 0.0 1 44 908 951 908 952 0.96

Sequence Information

Coding Sequence
ATGTTAAAGGACGCCGAGGAGCTGATAAAACGCTGCAAATTGACGTCGCTGCCGTCGCTGGCGCTGCACATGAACGATTACGGCCGCCAGGTGGCGCcagcgctgccgctgccgctacTAGCGAagccgccaacaacaatggcaacaacaactagccTGGGCATCGATCTGCATCATCCACATCCTCATCCCCAGTcccatcctcatcatcatcatctgcatacacatcagcagcagcagcaacatcatcagcagcagcagcaacagttgcaacagttgccgctgcCTCTTCTGCCtgcgtcgcagtcgctgcaCGGCAGCCACGCCCATGCCACGCCGCCAACAACGCCGCCCACGCCGCCAGCGCAGCCGCTGAACATGAGCCAAACTGCAACGTcaacagcaacgacgacaacagttgctgctgctgctgcaacaaaaacaacaacagttgcaccCGATGCTGCGACGGCAACAACGACAGctgcagccgcaacagcaacatgtgcaacagttgcaacgcCACCTGCCACACCTGCCACGTCTGCACCCACTCAACCGGCGCAGGATCATTACAGTCTCCGCTGGAACAATCATCAGAATCACATTCTGCGCGCCTTCGACGGACTGCTCCAAACCAAGACCCTCGTGGATGTGACTCTCGTCTGTGCCGAGACCTCGATAAGGGCACACAAAATGGTCCTCTCCGCCTGTTCCCCGTTCTTTCAGCGCGTCTTTGCCGAGACGCCGTGCAAGCATCCTGTCATCGTCCTGAAGGACTTTCGTGGCTGGGTTGTCCAGGCAATTGTGGATTTCATGTATCGCGGCGAGATTAGTGTGCCCCAGCAGCGCCTGCAGACACTCATCCAGGCGGGGGAATCGCTGCAGGTGCGTGGCTTGGTGGAAAGTTCGGTGCCGGAACATACACCAACCCCGGCTGCTTCCCCGGATGACTTCAATCTGCTGGACGCATCGCTGCTGGCGGCCAGCTTTGAGGATGAATCGCCGTCGATGGTCATGAGACCCTCCACGGGCAAGCTGATAATGCCGACACGTCTCTTTGCTGGCGCTGGCCATGCGCCGATGGCGCTCAGCCTACGCCGTAAGCGCGAGCAGGACAGCGAACGTGAGCCGGAAAGCGATCAGGAGCTGGGAAGTGGCTCACCCATGCCGAGACGCAAGCAAGCGCGTCCGAGGCGACGTTCCGGCGATGACTTTGCGCTGAGCAAGCCGGAGACGTGCTCGGAGACGTTGCCACTGCAAACTGTGATCAAGGAGGAgcgggagcaggagcaggataCGAGTGATAAGCAGCAAAATGAGGATGACGCAATGGAACAGGCtgagcagcagtcgcagcaaaTCCACGACAACGAGGAGGAGGAacaggaagaggaggagggtGGAGCACCTGCAGCTGCAGGCGAGATGGAGCACGCGCTGCCCCTCATCACGTCCAGCAATCAGCTGGAGCTGGACGAGGAGGAGTTGCAGGAGGATGAAGATGaacgagagcagcagcaagatCGGGCGGAAagccaacaccaacaccaacatgATCCGGatgagcaggaggaggagcaggaggaggaggaggagcaggaggacgaggaggaggaagaggaggaggaacaGGACATTGAGGAGCTGATACACACGACGAATGAGCTGCGTCGTCAGGcggctgttgccgctgccaatGCCGCTGCCATGTCGCCCTGTCCCAGCGACGGGCCCGAGGATCTGTGCACCACCAAGAAGGACAAGGACTCGCACTGCTCCTCCGACAacgagagcaacaacaacaacaacagcagcaagttgCAGGACAACAATCAGCGCATCATGTTGTCCTTGAAGGACATTCGCCAATTGAATGCCAAGCCGAGTGCAAGCTCCACGCCCAACAGCTGTGCCCATGGCAACAACGGCCTCTTGTCCTTTCccccgccgccgccgccacctgGCTTACGTCCGCACGACAGTCCGCCCTGCCACATGGAGGCGCTGGAGGCGCAGATGCATGCggcggccgctgctgctgccgctgctgctgccgctgctggtgTCGGGGAGAATCCCTTTCATCACATGGAGCATCAGATGGAAATGTCGCTggccgccgcagcagccgcagcagcaatgcACCGGGAGCGGGAGCGTGATCCGCGCGAGACACGCGAGCAGGCGCTGCAGCGGGAGCACAACGCGTTCGCCAGTAATCTGCTCGGACCGATGGGTCTGCCACCGTTTCATGGACACAATGGGGGCGTGGGGCATGCGCCGCACGAGCGGCTCGAGGAGAGCATGAATCGGCTGAGCAAGGAGTTTGGCAAGGAGTTTGGCAAGGAGTTTGGCAAAGATTTCGGCAAGGATTTCGGCAAGGATTTTAGCAAAGAGTTTTGCAAGGAATTTGCGCCCACGTCGCCAATGAGTTTGCATGGCCACTATAATCCGCAGGATGGACCGCATCCGCCGTCGCCGCTGCCCTTTCCCGGCATGTCCTCGGCGTTGACGCTGACGCCGCCGCACATGTTTGGTCTGGACTCGCCGCTTGGTTTATTTCCGCCTGGCATTGATCCTGGTAAACTTTACAATCCTCTAATGGAAATGAGCGATCCTCGCGATATGCCCGGCGGACCGCCGCCGTTTCTCAAAAAGAAAATGCCACGGCCGAAGGGACAACATTCGGCGCCACGAGGCGGACCGCCCCGTTCCTGGACAAACACCGAGCTGACGGAGGCACTGCAGCACGTGTGGAACAAGAAGATGACCACTTCGCAGGCATCCCGCATCTTTGGCATACCATACAACTCGCTGCTGATGTATGTGCGGGGCAAGTATGGGAAGAGTCTGAAGCTGGAGCAGTTGCGCAAGGATTGCATCAGTGGGCCGCCCATCGAGATGCTGCAAATGGGCATCAGTGgaggtggcggcggcggcggttcCTCCAAGAGCGAGAAAAAGGAGCGCAAGGAGAAGGACAAGGAGAAGCacgcagcagctgccaacaactccagtggcagcaacaacaacaacagcagcaacaacagcaacaatcataACTCGTCCGGTCATCCGAATCCAGCGCAGCTGTCCCATCATCCCAGCGACTTGGGTGCACTGGGTCCACTCGATCTGGAACTGGGCTTGCCGTTGGGTCCGCCCGTTGGGCCGCGCAGTGGCAGCTCTGAGCCAGATTTGCTGGGCGGACCCGGCGCCGGCCTCTTCAACCCTTTCAATCCGCAGGGCTTCTATCCGGATTTTGCTGGCGGTTTTCCGGGTCTGCCACTGAGCATGCTGAATCTGTTGCCGCCGGCGGAGCGGCATCATGCCGCCGTTGCCATGCATCATTTGGGTGTTAGCATGGATGAGGATTGCAAGTCGGTGGGCTCCAAGCAGTCCTCGTCGCTGGACGATGAGTACACCCTCTCCCTCGACCAACGGCGGCACAGTGAGCTCTCCAGCAATGGAACGGCGACGCTAGCCCAGGCGgCTGGATGCGGCAGCTGCACACTCCCCACCCCTCATACTCCCGCTACGCCGCCCCTGCCCCCTCCTCATCCGAATCCTGCCACGCATTCGCATCAGGCGTGTCgcgatttcaatttcaatccgAGCTTATTTGTGGCACGTCGCAAGCTGAAACGCTATCGGGCCAAGCGTGTCCATATGCAGCTTCAGGCCCcagtgggcgtgggcgtggcaccgcctcctcctcccccaCCCCCGCCGCCACCACTGCCTCCGACGTCGTTGCGCACCTAA
Protein Sequence
MLKDAEELIKRCKLTSLPSLALHMNDYGRQVAPALPLPLLAKPPTTMATTTSLGIDLHHPHPHPQSHPHHHHLHTHQQQQQHHQQQQQQLQQLPLPLLPASQSLHGSHAHATPPTTPPTPPAQPLNMSQTATSTATTTTVAAAAATKTTTVAPDAATATTTAAAATATCATVATPPATPATSAPTQPAQDHYSLRWNNHQNHILRAFDGLLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFNLLDASLLAASFEDESPSMVMRPSTGKLIMPTRLFAGAGHAPMALSLRRKREQDSEREPESDQELGSGSPMPRRKQARPRRRSGDDFALSKPETCSETLPLQTVIKEEREQEQDTSDKQQNEDDAMEQAEQQSQQIHDNEEEEQEEEEGGAPAAAGEMEHALPLITSSNQLELDEEELQEDEDEREQQQDRAESQHQHQHDPDEQEEEQEEEEEQEDEEEEEEEEQDIEELIHTTNELRRQAAVAAANAAAMSPCPSDGPEDLCTTKKDKDSHCSSDNESNNNNNSSKLQDNNQRIMLSLKDIRQLNAKPSASSTPNSCAHGNNGLLSFPPPPPPPGLRPHDSPPCHMEALEAQMHAAAAAAAAAAAAAGVGENPFHHMEHQMEMSLAAAAAAAAMHRERERDPRETREQALQREHNAFASNLLGPMGLPPFHGHNGGVGHAPHERLEESMNRLSKEFGKEFGKEFGKDFGKDFGKDFSKEFCKEFAPTSPMSLHGHYNPQDGPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGGGGSSKSEKKERKEKDKEKHAAAANNSSGSNNNNSSNNSNNHNSSGHPNPAQLSHHPSDLGALGPLDLELGLPLGPPVGPRSGSSEPDLLGGPGAGLFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAVAMHHLGVSMDEDCKSVGSKQSSSLDDEYTLSLDQRRHSELSSNGTATLAQAAGCGSCTLPTPHTPATPPLPPPHPNPATHSHQACRDFNFNPSLFVARRKLKRYRAKRVHMQLQAPVGVGVAPPPPPPPPPPPLPPTSLRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00498965;
90% Identity
iTF_00528147;
80% Identity
iTF_00607167;