Basic Information

Gene Symbol
Tfcp2l1
Assembly
GCA_035043275.1
Location
JAWNNC010000518.1:6695206-6703166[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.098 9.7e+02 -1.0 2.5 95 127 34 66 17 92 0.59
2 3 1.4e-35 1.4e-31 109.6 0.1 57 189 437 566 386 577 0.90
3 3 2.7e-12 2.7e-08 33.5 0.5 186 218 595 627 586 630 0.87

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTTTATCGCAAAGTTCCGGCCTTTTGGATTTAAAAAGCATATTTGATCCGCAATATTCAttacaacaacatcaacaagaaaatcatcatcagcaacatcaacaacaacaacagcagcagcagcaccaccagcaccagcagcaactttATTTGCcatcacagcaacaacaacaacaacattatcaAATATCACACATATCAACGAAATTTGATTTGAGCATTTTCAACGATTTCGACCAAATGgaattcaataataatttgagtCGAAACCACAATCAACACTACcagaataacaataataataatggtaataacaataacgatAATAACAgtagcatcaacaacaacaataacaacaacaacaacaacgctgaACATTTAAGTCAGGTCCAGAATCGCCATTTCATGAGCGGctatcatcatcagcatatTGGGTCAGATTATGAGCAAGTGATTAACTTTGTTGACTCACCACCGACCTCTGAGGAATCGTGGACAGACGCACAGTCCAAGGACTCGCCAGGACCGCATATTATCGACGTACGGACAATTTACTCGGAGAGTGGTTCACGCAAAAGACGAATGGATTGGGACTCATTGGATATTGGCCAAAGTGAAAATTCGGCGACAACACAATCGGGCGACATACCCAACAAGGTGCCACATCTGGAGAAAGATAAACACAAACGTGAAAAACATTCAGGTCGCAGCAGTTGGAGCGACGATATTGGCTTCGATCTGAACGCCGATTTTAATAGCAACTCATATTTGAACAATGAAAACTTTTTGGCCTTCTCTCCGAGCTTAACGGCATTGAAACAGGAGCCGCAAACGGAGCAGCTGAAACCAACAATTACAAAGCTACCcttggacagcagcagctctgcGGTGGGGACAGTGCACAATATTGGCAAGATCGTCAAATCGCCATTGAGCGACGCCAATCATTCACCACAGCGCCCGGCGGCGCAATCCCAGGAAGTGGTTGgcgcagctggagcagcaggagcaacagtaacagctgGTGGCAACAGTGGCAGCGAAAACGATGGCAAGCATGAGTTGAACTCCGGCATTATATGCGGCCGTGGCTCGCCACAAGGCTCGCCCGCCTCAACGGAATTTGAACTGAACGACAGaaatgcagttgcaactgACAAGTCCATAGCTGCATCTGGCAACGAGGCGGCATATGCCCAGGCGCCACGCTctgagctgcagcagcaggtgaGCGTTGTCGAAGCGGCCAAAATTGAGCCAAGCTCATCCACTGGTGCATCACATGCCGAGGATCACAACTATGAGAtcaaattgaagaaaattgGTGACTTATCATTCTATCGCGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCATGAGCGTCGATTGCAGTTCATGGAACGCGAGCAGATGCAACAATGGCAAGCATCGCGTCCTGGTGATCGCATCATTGAGGTGGACGTGCCATTATCGTACGGTTTGTGCCACGTGTCGCAGCCATTGAGTTCGGGTGCATTGAACACGGTGGAGATCTTTTGGGATCCGTTCAAGGAGGTCGGCGTCTACGTCAAGGTCAATTGCATTTCAACAGAGTTCACACCAAAGAAGCACGGTGGTGAAAAGGGTGTCCCGTTTCGTCTACAAATTGAAACCTATATTGAGAACTCACCAgcaaatagcagcaacaataacagcaacagcagcagcaacagcaacagcagcagcggtgccAGTGGGGCACATCGGACAATCGTGCCGCACTCAATGGCAAACAGGCGAGTGCATGCAGCTGCTTGTCAGATTAAGGTCTTCAAGCTAAAAGGCGCCGATCGAAAGCACAAGCAGGATCGGGAAAAATACGAAGCGTCCAACATCTGA
Protein Sequence
MALSFLSQSSGLLDLKSIFDPQYSLQQHQQENHHQQHQQQQQQQQHHQHQQQLYLPSQQQQQQHYQISHISTKFDLSIFNDFDQMEFNNNLSRNHNQHYQNNNNNNGNNNNDNNSSINNNNNNNNNNAEHLSQVQNRHFMSGYHHQHIGSDYEQVINFVDSPPTSEESWTDAQSKDSPGPHIIDVRTIYSESGSRKRRMDWDSLDIGQSENSATTQSGDIPNKVPHLEKDKHKREKHSGRSSWSDDIGFDLNADFNSNSYLNNENFLAFSPSLTALKQEPQTEQLKPTITKLPLDSSSSAVGTVHNIGKIVKSPLSDANHSPQRPAAQSQEVVGAAGAAGATVTAGGNSGSENDGKHELNSGIICGRGSPQGSPASTEFELNDRNAVATDKSIAASGNEAAYAQAPRSELQQQVSVVEAAKIEPSSSTGASHAEDHNYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSGALNTVEIFWDPFKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSPANSSNNNSNSSSNSNSSSGASGAHRTIVPHSMANRRVHAAACQIKVFKLKGADRKHKQDREKYEASNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00573808;
90% Identity
-
80% Identity
-