Basic Information

Gene Symbol
cnc_1
Assembly
GCA_035043275.1
Location
JAWNNC010000509.1:7862436-7868885[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-16 1.8e-13 50.4 3.2 3 62 544 603 542 606 0.93

Sequence Information

Coding Sequence
ATGCAGCGCTTGAATCGTAGCGTGTCCATGGATCTGGCCACCTATTTTAGCCCCATACCGAGCATGGGCGTGGTCAGTGGCGTCTCCGATATGCCGCCGTATGCATCCCACTACACCGGCTACTCGTATCAGGGTCCAActggagctgctgctccagGAATGCCACCCAGTGCCCAGCAGTATGGACAGGCGGCTGTTGCACCACCATCTttgccgccaccgccgccgccccatcacagtcacagtcacggTCATCATGCAGCAATGCTGCATGCGAATTCCACTTTGGGCGATCTCTGCTCCAGCCAGCCGCACTATGGCCACAATCTCGGCTCTGCGGTCTCATCCAGCATGCATTTGACCAACGCCAGCCATGAGGCTGATgcagctgcctctgctgctgccgccgctgctgcagcagctagTAGCAACTACAAAATGGAACATGAGATGATGTATTATGCGAACACCTCGTCGGACATGAATCACACGGATGGCCTAATGAATTCCTTCTTTAACGATGAGGATCTGCACTTGATGGATATGACGGAAAGTTTCTGTCGCATGGTGGACAACAGCACAAGCAACAATTCCTCTGTATTGGGTCTGCCCAGCAGTGGACATGTCAGCAACGCAGGCAGCTCAACTTTGAATGGCGGGAGTCATGCGAATCCCAATAGTGTAGCCGCTGTTCCCGGTACTATTGTTGCGGGTGGTATCACCTCGATGAgtggtgcaacagcagctgctgctgctgccgctgttgggGTCGTTGGTGCCACTGGTGGCATGACCAGCGATCTATTGGccaacgctgctgctggcgctcaGGGTGGCGCACAGGATCGTTTGGACGCGTCCAGTGACAGTGCCGTCAGTTCGATGGGATCCGAGCGTGTTCCATCGCTTTCCGACGGGGAGTGGGGCGAGGGCAGCGATTCGGCACAGGACTATCATCAGGCCAAGTACGTCGGACCCTATGATTTtagttacaacaacaacaataccaacacACGCCAACCGCCGGTGGCACAGAAGAAGCATCAATTGTATGGCAAGAGGGATCTGCACAAAAATACGCCAACCGGAGCAACGCAGCAGCCACCAGtggtgcagcaacagcagcagcagcagcaacaacagcagcagccgccgccgcaggtGCAACAGTGCATTAAGTATGAATATGAGGCAGGTGCCGCTGCGGCATTCAGCGTTGGTGAGGCAGCCGCCATGGCGCCCGCTCTGGCCAAGGATTATCATCAGACGTATGGAATGAGTGCGGCGAGTGCTTTCACCGCTGAATATGGCATGCCACGCCCAGCGCAGGGTATTGTGAACCTCAATCACACCTATGCGCTGCCCCAAGGAACGGGCGGAGCTCTGCCTCAGGGCAGTGGATCGCTGAGCAGACCGCATCCGCGGGACAAGAAGCTCGCTGCAGGCAGCAAACATTCATCGAAATCCGGGGAGGAAAATCTGACCGAGGATGAGCATCTGTCGAGGGATGAGAAGCGGGCACGTTCCCTGAACATACCCATTCCGGTGGGCGATATCATCAATCTGCCGATGGATGAGTTCAACGAGCGTCTCTCCAAATACGATCTGAGCGAGAATCAGTTGTCCCTGATCCGTGACATACGGAGACGTGGCAAGAACAAGGTTGCCGCACAGAATTGCCGCAAGCGCAAGCTAGACCAGATCCTCACGCTCGAGGATGAGGTGAATACGGTGGTGAAGCGCAAGTCGCAATTGAATCACGATCGCGATCATCTCGAGGGCGAACGCAAACGTATCTCCAACAAGTTCTCCATGCTGCATCGCCATGTTTTCCAGTATTTGCGCGATCCCGAAGGCAACCCTTGCTCACCAGCTGATTACAGCTTGCAGCAGGCTGCTGATGGTTCCGTTTACTTGCTGCCACGCGACAAGGTCGACAATggaacgacagcaacagctgctgccagtGCCGTttcgggcagcagcagcagcgttaatggccagcaacaacaggcgtcgcagcagcagcagcagcagtcgacgCTGCACAATCATCAGGGCCATCATCAGGCAGCACAGGCAATGCCGccattgcagcagcagcagcagcaagcggcGCATCATCAACtgttgccacagcaacagcagcaacaacaacaacagcaggcgtcacatcagcatcagcatcacaAGGAATGA
Protein Sequence
MQRLNRSVSMDLATYFSPIPSMGVVSGVSDMPPYASHYTGYSYQGPTGAAAPGMPPSAQQYGQAAVAPPSLPPPPPPHHSHSHGHHAAMLHANSTLGDLCSSQPHYGHNLGSAVSSSMHLTNASHEADAAASAAAAAAAAASSNYKMEHEMMYYANTSSDMNHTDGLMNSFFNDEDLHLMDMTESFCRMVDNSTSNNSSVLGLPSSGHVSNAGSSTLNGGSHANPNSVAAVPGTIVAGGITSMSGATAAAAAAAVGVVGATGGMTSDLLANAAAGAQGGAQDRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQDYHQAKYVGPYDFSYNNNNTNTRQPPVAQKKHQLYGKRDLHKNTPTGATQQPPVVQQQQQQQQQQQQPPPQVQQCIKYEYEAGAAAAFSVGEAAAMAPALAKDYHQTYGMSAASAFTAEYGMPRPAQGIVNLNHTYALPQGTGGALPQGSGSLSRPHPRDKKLAAGSKHSSKSGEENLTEDEHLSRDEKRARSLNIPIPVGDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNTVVKRKSQLNHDRDHLEGERKRISNKFSMLHRHVFQYLRDPEGNPCSPADYSLQQAADGSVYLLPRDKVDNGTTATAAASAVSGSSSSVNGQQQQASQQQQQQSTLHNHQGHHQAAQAMPPLQQQQQQAAHHQLLPQQQQQQQQQQASHQHQHHKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-