Basic Information

Insect: Drosophila tani
Gene Symbol: -
Assembly: GCA_008042535.1
Location: VNJO01005862.1:9583-11395[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.73 63 4.6 0.4 2 23 351 373 350 373 0.89

2 7 4.3e-06 0.00038 21.0 0.3 1 23 380 403 380 403 0.98

3 7 1.5e-06 0.00013 22.5 1.8 1 23 408 430 408 430 0.98

4 7 1.3e-05 0.0011 19.6 0.1 1 23 436 459 436 459 0.92

5 7 0.00014 0.012 16.3 1.0 1 23 465 487 465 487 0.98

6 7 1.8e-05 0.0016 19.1 3.3 3 23 495 515 494 515 0.97

7 7 0.00013 0.012 16.4 1.3 1 23 521 544 521 544 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.73	63	4.6	0.4	2	23	351	373	350	373	0.89
2	7	4.3e-06	0.00038	21.0	0.3	1	23	380	403	380	403	0.98
3	7	1.5e-06	0.00013	22.5	1.8	1	23	408	430	408	430	0.98
4	7	1.3e-05	0.0011	19.6	0.1	1	23	436	459	436	459	0.92
5	7	0.00014	0.012	16.3	1.0	1	23	465	487	465	487	0.98
6	7	1.8e-05	0.0016	19.1	3.3	3	23	495	515	494	515	0.97
7	7	0.00013	0.012	16.4	1.3	1	23	521	544	521	544	0.97

Sequence Information

Coding Sequence: ATGGAAACGTGCGGCCTTATTTACGTGAGCGGCGACTACGATAAGTTCCTGATGCGCTGCTCCCACTGCCCCACGGACGTGGAGGTGGCCCAGTGGCAGGAGTTCGTGCTGCACTTCCGGAACATGCACAGCTCCCACGCGCGGCAGGAGCAAGAATTCATTACAGACGAAGATGCTGGGAAATCCGAAGAATTGGAACTCGAAGAGACTGAAGCGGCGATCACAGAGGAAGCAAAGATAGAGATGGAAGTAGAAGCGCTCGAATCATCGCCTAACGCCACAGAGGAGTCGGAGGAGGACTCGGGTGGCTCAGACCAGGAGGCGGAACCCGCTGAACCAGCTGTGGAGAACACCGACGCAGAACTTGCGCCCATTTATAAGTTTCACCCCTCCTTCTTTCGTCGGGATATTCGGACGCTGAGGTTCATAGAGATCTACAAGGCACAGCCATGCCTCTGGAATCCCGAACACAACGAATACAAGGAGCCCCGGGCATGCTCGGATGCGTTAAAGCAGATGCTTGCTGCATTGGAGGCAACGGCGGCAGTAGTCCTGAACGAGATTGGCCTGAAAATGGCCATCAAGAAGCTGCACACACAGTTCAACACCGTTCACAAGCGCATGCTGTCCGGAAAGCAAAAGCCCCAGTCCCTGGCCTACAGCATTTACACTCTCTGCAGCTTTCTGAAGAGCAGCCGGGAACAGGAAGAAGCTGGCAGAAACGGAAAGATTCAGCtggatttttcaaaaaagaaCAAGCTAACCACGAGGGTAATTGAGATGTACGCCAACTTTCCGCAGCTGTACGATCCCACGCACAAGGAGTTCAGCAGCATGAACTCTCGCAAGCAGGCCTACGAGAGTCTGGCCGCAGAGATTTCGGTGCCCAATGCAGACGTGAGCAGTGATGACATATTCCGCGCCATCCAGCATCTCCGCCAGTGGTACTACATAACCACGAAGCATGCCATTAATGCCGGCAACTGGGCGGAGAAGTTCTACCTGGAGGTGTGTCGGTTCCTGCCACCAAAGATGTTCAAGCAGCGGCTGGTCTGCGAGATTTGCCAGCAGGTCACATACTCGGATCACGTGCTGCAGGCGCACTTCTTCAAAGCTCACAACATCGGTGATCTGCCGTTCAAGTGCACCCTTTGCGACCGCAGCTTTTCAGGCCGCGTGGGCCTGGCCAATCACATGCAGCGGGCTCACATCGGAAAGACACACAAGTGCACCCACTGCGAGAGGGCTTTTGCCGTGGCCTCGGACCTCCAACTCCATATCCGGACCCACACGGGCCACAAGCCCTATGTGTGCGAGCAGTGCGGCAAGGCCTTCCGGCTGAGGTCACAGCTGACGCTCCACGTCACGGCAATTCACACCAAGATTCGGGCCTTCAAATGCCACATGTGTCCCAAGGACTTTGTGAAGAAGGTCGATTGGTCAGATCACATCAAGGGCCATCTGAACATTCGCGACAAGATATGCAACGTGTGTGGCAAGGGGTTCACCAGCTGCCACTCCCTCATCCGTCACCGCCAGATCCATTCCGAGGTGAAGAAGTTCGTGTGCAAGCTGTGTGACTCTAGATTCTCCCAGTTTGTTGGCCTCAACTCCCACATGAAGCGCACCCACAATATTGTACGCAACAAGCAGCAAAAGCCACCAGAGGCTGTTGATGCCGAGAGTactgttaattaa
Protein Sequence: METCGLIYVSGDYDKFLMRCSHCPTDVEVAQWQEFVLHFRNMHSSHARQEQEFITDEDAGKSEELELEETEAAITEEAKIEMEVEALESSPNATEESEEDSGGSDQEAEPAEPAVENTDAELAPIYKFHPSFFRRDIRTLRFIEIYKAQPCLWNPEHNEYKEPRACSDALKQMLAALEATAAVVLNEIGLKMAIKKLHTQFNTVHKRMLSGKQKPQSLAYSIYTLCSFLKSSREQEEAGRNGKIQLDFSKKNKLTTRVIEMYANFPQLYDPTHKEFSSMNSRKQAYESLAAEISVPNADVSSDDIFRAIQHLRQWYYITTKHAINAGNWAEKFYLEVCRFLPPKMFKQRLVCEICQQVTYSDHVLQAHFFKAHNIGDLPFKCTLCDRSFSGRVGLANHMQRAHIGKTHKCTHCERAFAVASDLQLHIRTHTGHKPYVCEQCGKAFRLRSQLTLHVTAIHTKIRAFKCHMCPKDFVKKVDWSDHIKGHLNIRDKICNVCGKGFTSCHSLIRHRQIHSEVKKFVCKLCDSRFSQFVGLNSHMKRTHNIVRNKQQKPPEAVDAESTVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00572101;
90% Identity: iTF_00590422; iTF_00531838; iTF_00480349;
80% Identity: -