Basic Information

Insect: Drosophila tani
Gene Symbol: -
Assembly: GCA_008042535.1
Location: VNJO01009681.1:7507-9601[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.96 84 4.2 2.1 1 20 131 150 131 151 0.92

2 10 0.00015 0.013 16.2 0.6 2 23 199 220 198 220 0.97

3 10 0.00023 0.02 15.6 0.9 1 23 246 267 246 267 0.98

4 10 0.00099 0.087 13.6 1.9 1 23 274 296 274 296 0.98

5 10 8.8e-05 0.0077 16.9 0.2 1 23 322 344 322 344 0.98

6 10 8e-08 6.9e-06 26.5 0.9 1 23 350 372 350 372 0.99

7 10 0.0011 0.095 13.5 5.5 1 23 378 400 378 400 0.98

8 10 1.7e-06 0.00015 22.3 0.5 1 23 406 428 406 428 0.97

9 10 3.4e-05 0.003 18.2 0.3 1 23 432 454 432 454 0.99

10 10 0.089 7.7 7.5 2.7 1 23 479 502 479 502 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.96	84	4.2	2.1	1	20	131	150	131	151	0.92
2	10	0.00015	0.013	16.2	0.6	2	23	199	220	198	220	0.97
3	10	0.00023	0.02	15.6	0.9	1	23	246	267	246	267	0.98
4	10	0.00099	0.087	13.6	1.9	1	23	274	296	274	296	0.98
5	10	8.8e-05	0.0077	16.9	0.2	1	23	322	344	322	344	0.98
6	10	8e-08	6.9e-06	26.5	0.9	1	23	350	372	350	372	0.99
7	10	0.0011	0.095	13.5	5.5	1	23	378	400	378	400	0.98
8	10	1.7e-06	0.00015	22.3	0.5	1	23	406	428	406	428	0.97
9	10	3.4e-05	0.003	18.2	0.3	1	23	432	454	432	454	0.99
10	10	0.089	7.7	7.5	2.7	1	23	479	502	479	502	0.95

Sequence Information

Coding Sequence: ATGTCAACGCACAACGAGCCCGAGGAGACTAGGTCCCACATGCATGTGGAGGACGGACTCTCGTCCAGATGTGGAACAACCCAGGAGCTGCTTTTCTACTGCGAGAGCTGCGCCAACATCTACGAGGATAGTGAGGCTTACGCCAAGGACCACAGTCAGCAGCCCGGCTGCTGCGGCGGTGGTATCAAGGAAGAGTTTGAGTTTGTAGAGGAGATAATTGCAGACGATcaggccgaggccgaggaggTCACACCAGGTAGCACGTTGGCCGAGGAGGATAGAGAAGAGGAAATCCTCGAAGCTGACGTGCCGCTCTGGGAGGTGGTAGAGGACACTTCTGCCTCCATTAAGGTGGAACAGAACGAGACTGACACAAGCCATTCGGATCGGTATTTTTGCTATGACTGCCACAGCATTTTCGAAAACAGAAGCAGCGCGGAGGATCATGTTTGTCCGCAGGCAGAATCTGGCGGTGCCTGCATCCAGCACGCAGTTGAAGCTGCCGCAGGCGCGGACAAGCCATCACCACGCCGCAAGTTACCCAGCGTGGCAGCAAGGTCGGACGCTAAGAGTGGGGCACAACCCAGGGTCATTAGCTGTGAAATATGCAACACCGTTTTCAGCACTGCCAAGTTTCTCAAGTTCCATATGCGCATTCACGAGAAGGTCGTGTCCAAGAGCATTCAAGACGCCCTTCCCGTGGGCGCCCACCAGCAGTACAGTGAGCTGGATCAGTTTTATTGCGAAATTTGCAACAAGAGCTTTGACGAGAACCTCCTGACGGTGCATAAGCAAATGCACCAGCAGACCACCAAAGAGTTTATGTGCAGCATTTGTAATCGCCAATTCTACAACGCCATCGACTACCACATGCACCTTAAGATTCACCAGAAGCCGCGCGATGCGGATGCCGCCAAGACTTCCGAACATCGCGCCAGTGGTGGCGATAAGGAGAAGCCGGGCTTTCCCTGCCAGTACTGCGAGCGTGTGTTCCCTCGTCCCTACGAGAAGGTCAAGCACGAACGTGTGCATACGGGCGAGAAGCCCTACTCCTGCGAGGTGTGCGGCAAGACCTTTCGCGTCTCCTACTCCCTCACCCTCCATTTGCGCACTCACACGAACATTCGTCCATATGTGTGCACGGTGTGCAATAAGCGGTTCAAGTCGCATCAGGTGTACTCCCACCACCTGCGGATCCACAGCTCGGAGCGGCAGTTTGCCTGCGACGTATGCCCAAAGTCCTTCCGCACCTCGGTGCAACTTTACGCGCACAAGAATACCCACACCAAGCCATACCAGTGTGTCCTTTGCAATCGTCCCTTCTCGTCGATGTATGCCGTAAGGATTCACATGCAAACACACGAGGTAGAGAAGGGAAAGGAGGAAGGTGGAAAAAGCGTTCAGACTACCAAGAGCCAAGCGTCAGCTGGGAAAttctgttgcagttgctgtggAGCAGAGTATGCCCGCATGTTTGCCCTGCGGCTGCACATGAAGACAGCTCACGGCCTGGTGGAGGAAGTGATACAGGACGAGGAACATTCATCTTCGGCCCCAGAAGATGTCctcgccaccgccgccgcccacacGGACTCTGAGACTGCGGTGCTAATAGCAGCCGCCGAGGCTGACGCTGCCTATATCAACGCTGCGGTGAACGATGTCGATGTAGTGGGATCCGTGCCCACATACGACGAGGTAGCCGTAGAGTTCGATGTTGATAACTTTCACAGCGAGGAGATCATCACGGATTGGCTTAAATAG
Protein Sequence: MSTHNEPEETRSHMHVEDGLSSRCGTTQELLFYCESCANIYEDSEAYAKDHSQQPGCCGGGIKEEFEFVEEIIADDQAEAEEVTPGSTLAEEDREEEILEADVPLWEVVEDTSASIKVEQNETDTSHSDRYFCYDCHSIFENRSSAEDHVCPQAESGGACIQHAVEAAAGADKPSPRRKLPSVAARSDAKSGAQPRVISCEICNTVFSTAKFLKFHMRIHEKVVSKSIQDALPVGAHQQYSELDQFYCEICNKSFDENLLTVHKQMHQQTTKEFMCSICNRQFYNAIDYHMHLKIHQKPRDADAAKTSEHRASGGDKEKPGFPCQYCERVFPRPYEKVKHERVHTGEKPYSCEVCGKTFRVSYSLTLHLRTHTNIRPYVCTVCNKRFKSHQVYSHHLRIHSSERQFACDVCPKSFRTSVQLYAHKNTHTKPYQCVLCNRPFSSMYAVRIHMQTHEVEKGKEEGGKSVQTTKSQASAGKFCCSCCGAEYARMFALRLHMKTAHGLVEEVIQDEEHSSSAPEDVLATAAAHTDSETAVLIAAAEADAAYINAAVNDVDVVGSVPTYDEVAVEFDVDNFHSEEIITDWLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00613632;
90% Identity: iTF_00480322;
80% Identity: -