Dtan010300.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila tani
Gene Symbol
-
Assembly
GCA_008042535.1
Location
VNJO01012142.1:37059-38861[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0023 0.2 12.5 4.7 3 23 238 258 237 258 0.98
2 12 9e-06 0.00078 20.0 3.0 3 23 270 290 268 290 0.95
3 12 9.5e-06 0.00083 20.0 1.9 1 23 296 318 296 318 0.99
4 12 5.3e-07 4.6e-05 23.9 2.1 1 23 324 346 324 346 0.98
5 12 7.4e-07 6.5e-05 23.4 1.3 1 23 352 374 352 374 0.98
6 12 6.6e-06 0.00058 20.5 5.1 1 23 380 402 380 402 0.99
7 12 3.7e-08 3.2e-06 27.6 3.2 1 23 408 430 408 430 0.99
8 12 3.8e-06 0.00033 21.2 3.7 1 23 436 458 436 458 0.98
9 12 3e-06 0.00026 21.5 1.2 1 23 464 486 464 486 0.97
10 12 4.4e-05 0.0038 17.9 6.3 1 23 494 516 494 516 0.99
11 12 0.00047 0.041 14.6 2.7 1 23 525 547 525 547 0.98
12 12 0.00021 0.018 15.7 1.7 1 23 552 574 552 574 0.98

Sequence Information

Coding Sequence
ATGGAAAGATCGGACGGGGCCAGCTTGGAGAAGAACTGCCGGGTCTGTGCCGGCCACTCAACGATACTGGTGGACCCCTTCTCCACAGAGATCTCCGATCCGCCGATTTCGGAAATGCTCAACTCGATTTTGGCCGAGAAGTGCCGCGTCAACCGGGATGCTCTGCCCCAGAAAGTCTGTCCCGCCTGCCTGGTGGCCGCGCAACAAGCTTTCCACTTCAAGCTCAAGTGCGAGGAGAGTTATCGTTACTTTTCCGATCTGGTCACGATGCCCACATCCGACAACTTGGTCCAGGGAAGGAGGCGTGGGAGGAGAGCTGGAAAAGAGCCTCGTGTTACCTTCGAAGTGGTCGGATGTGAGGACCCGCTGGACACCACAGAGCTGCAGGAGCCGGCGAAGGAAGACGATGGACCAGTTGTGAAAGATGATATCGATTCCGAGCCAATGGAGAGTCCGTCCGAGGTCGTTACAGAGCTCCACGAAGTGCTAGAAATAAGCCtccataataatataaagaccGAGGTGGATGAGATGTCCAACGGGGTTTCAGTCGAGGCTGCGGACGAAAATGACGAAaaagaggacgaggaggatgacgacgacgaggaagaTGAGTGGTCTGGTGGCTGGACCGAAGACGAAGAGGAGCCCTGGATGCCCAGCGATTCAGAGACCAAGCCGGCGACTCCCGGAAAGGATCTATCGCTGCTGTGCACCGAATGTGGATTGACCTGCAAGTCGCACAAGTTGCTGTCCAGGCACATCCTGCGTCACAGACAGCAGGAGGATCCACAGCGACCGCATCTGTGCGACTCCTGTGGCCGGGGTTTCAGGACCAAGTCGCAGCTGACAATCCATACGCGCAGACATACGGGAGAGCGACCCTTCAAGTGCACCATCTGCCCAAAGACGTACACCCACGGGCCGACGCTCAAGATGCATATGCTGACCCACGACGAGAAGAAGGCGCACAAATGCTTGGACTGCGACAAGTCCTTCTACAGCATCTCCAACCTGAGGGCCCATCAGCGATGGCATTCGGGCGACCGACCGTACCAGTGTCCCGACTGTTCCCAGACCTTCACCAAGAACTCGGGCCTGAAGCTCCACCGACGCCTGCACACGGGTGAGCGACCGTACAAGTGCCACCTGTGCGACCAGGCGTTCGTCCAAAACCATCATCTCGTCACCCACTTGCGCGTCCACAACGAGGATCGGCAGTTCAAGTGCCCCGACTGCGACAAGTCGTTCTTTGAGAAGTCCAACATGAAGAAGCATCAGCGCACCCATTCCGGCGTCAAGCCATTCATGTGCGAGGAGTGCGGCGCCGCCTTCTCGCACAACCATCACCTGAAGAGCCATGTCCGCGTCCACACCGGCGAGAAGCCCTACAAGTGCGAAGAGTGCGGGAAGCGATTCTGCGCGAATCAGTCGCTGGAGAAGCACATTATCTGGCATGCGGAGAACCCGGATCGCGCCTACAAGTGCTCCAAGTGTCACAAGAGCTTCGACACGCACCAGGGTCTCCGAGCACACGAGAGGAAGCACCGGAATCCAGATGAGCCAACGCTGCACCAATGTCCGCATTGCGATGTCAATTTTGCCCTCAAAAAGACCCTGGACAAGCACATAAGCAGTCACAAGATTAGGCCCTACCCATGCTCGCAATGCTCGGAGGGCTTCTTCTCCCAAAAGAGCTACACCAAGCACCTGCGGCTGCATAACCTCAAGAAAAAATAG
Protein Sequence
MERSDGASLEKNCRVCAGHSTILVDPFSTEISDPPISEMLNSILAEKCRVNRDALPQKVCPACLVAAQQAFHFKLKCEESYRYFSDLVTMPTSDNLVQGRRRGRRAGKEPRVTFEVVGCEDPLDTTELQEPAKEDDGPVVKDDIDSEPMESPSEVVTELHEVLEISLHNNIKTEVDEMSNGVSVEAADENDEKEDEEDDDDEEDEWSGGWTEDEEEPWMPSDSETKPATPGKDLSLLCTECGLTCKSHKLLSRHILRHRQQEDPQRPHLCDSCGRGFRTKSQLTIHTRRHTGERPFKCTICPKTYTHGPTLKMHMLTHDEKKAHKCLDCDKSFYSISNLRAHQRWHSGDRPYQCPDCSQTFTKNSGLKLHRRLHTGERPYKCHLCDQAFVQNHHLVTHLRVHNEDRQFKCPDCDKSFFEKSNMKKHQRTHSGVKPFMCEECGAAFSHNHHLKSHVRVHTGEKPYKCEECGKRFCANQSLEKHIIWHAENPDRAYKCSKCHKSFDTHQGLRAHERKHRNPDEPTLHQCPHCDVNFALKKTLDKHISSHKIRPYPCSQCSEGFFSQKSYTKHLRLHNLKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480298;
90% Identity
iTF_00480298;
80% Identity
-