Basic Information

Gene Symbol
Camta1
Assembly
GCA_008042535.1
Location
VNJO01012608.1:52456-75118[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2 2.2e+04 -5.3 5.4 69 110 148 189 132 245 0.64
2 2 9.9e-49 1.1e-44 151.2 1.7 2 116 275 387 274 387 0.98

Sequence Information

Coding Sequence
ATGGCTGGCTACAGATCCCTGCCCCTGGCTCCTGTGGCTGCCACAGCGGCCGTGCAGCCCACGATGGGCGTCCAGGTCCAGCCCACGATGGCCGCCTACGCGCACCACCAGTCGATGACGGCCATGTCGAACAACGGTATTATCTATCAGTCGGCGGTGCACGCCTCCATTCACAGCCTCAATACGGTCCAGAGCCAGCACCGATCCTCAACCACCACCCATCATCACATTCTAGCCACGGCcacagcgacggcggcggcagcggcaactgcaactgcaactgcatcggcagcggcggcggcggccacagcatccgctgcagcggcggcagcagcagcagctgttgccctgccgacggcagcagcaactgcagcggcGATACCGCAGCAACATGCCGCCTACGGGCAGCAGCActcgcagcaacagcagcaacactcgcagcagcagcagcacctccaacaacagcagcaacatatGTCGCatcagcaacaccaacagcaacagcagcagcaactgatGGCCCATCAGCAGCACTCagtggtgcagcagcagcaacatcaccaTCTgacgcaacagcagcagcagctcgcgcagcagcaacagcaccaccatcatcaccaccaccaccatcaccagcagTTGTCGCTGCACCAGAACCACCTGTACTTCAGCGGCGCCAGCCTGGGTggccaccaccatcaccaccaccggCAGATCTTCAGTCACCTGCAGAGCGCCCTCATGCCGCTCAGTGTCAATGGCGAACCCATCAAGCTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCACAGCGCCATCGTTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCATGGCGAGTGGCAGTCCAAGGAGGTTCGAACCAGACCCAAGAGCGGCTCCCTGTTGCTCTACTCCAGGAAGAAGGTCCGCTACCGACGCGATGGCTACTGCTGGAAGAAGCGCAAGGATGGCAAGACAACGCGCGAGGATCACATGAAACTCAAAGTACAAGGCACGGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTGTTGCAGAACCCGGACATTGTTTTGGTGCACTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCCGTGATAGCGCCGAGCATCACACTTTGGGGCGACAAGAAGGAGTGGACCAAGGAGGAGCTGGTCAGCCAACTGAAGCCCATGCTCTCCACAGTTAATTCGGATGATGACTCAGACTCTGGCAATGATATTGAAATATCGACGGCAGAGACAGTGGAGTCCATAGTCTGCCAGCTGATGGAGAAACAGAGATTGTCCCGCCAGGCGGCGCTGGTCAAGCAGCTGGACTGCGGCTGCGGGGATGCAGGGTGTGCGGACGGCAAGACCTGCACGCATCCCGTGATGCGGCGATCCGGTGCAATACTCAAGTCCTCGGTGCAGGAGAAACGTTTAGGAGAAGGCTTTAATGGCAACACGCCCAATGTGGTGGTGGCCAGCAAGCTCTACTCCCGCTGGGCAGAGCGACCAAGGCAGCACCTGGACGGCCATGGGCAGTTCCACAATGCCACGCAGCAGTTGCCGCAGGAGTCGGCCATCAAGTTCCAGATCAttccgccgcagcagcagcaacaacagcagcagcaacagcagcagcagcaacagcagcaacaacagcagcagcagcaggcaggacATGGAGATGGTGGCTATCAGCAGTATCGAGGAGCCAGTCAAATGCTGGCCGCAAGAAGTAATCTggtgatgcagcagcagcagcaacaacaacagcagcagcagcagcagcaataccatcagcagcagcaacagcagcagcagcagcacctcagCCTGCAGAGATTCGTGGCCAGTCAGAGCCAGAACTCGGTGCATCTCAATCAGCAGCACAGGCTGCAAATTGCCAATACAACAATCACGGCCACAGGCAGGGATCCTGCggcaacaggagcagcagcagcagcagcagcagcggcagcggcggctgtAGTTGCCTCAAATGTTATGGACACCGAACTAATTGAAACCCAAAGCCACAAAATCACAAACTCCGGCAgcaataacagcagcagcaacaacagcaacaacagcagcaatggCAATGCCAGCAAGCAATTAGCAGGCCAAACAAACAACGAATTAAATGTCGTAAACAATAACGACACCGGCAACAATAATAACTTCATGTACAATCATCAGCAGCAACTCAATGCttccagcaacaacagcaacagcagcgcccagcagcaacagcagcagcagcaacaacagcaacattattataaattgcaACAGACAGCAGCAACCCCAAGCAGTGGCCAACCCCAACCTCCTGTGGAGGCCATGTGCATGTCACCGGagcaccgcagcagcagcggcagccagcCCCCAGCTGCCACGTCTTCCGCTGGCAACCCCACACCCACGTCGGTTGGCTCATCCACCTCGAGTTCCTTACAATCGATTATCGATGGcaatcagcagcaacaaattacAACGACATCGtcgacggcggcagcagcaacttgtGATAATTTAATGAGCGCCAATGCGCTCTCTGAGCAGGATgtgggcagcagcaacaatcagGCCACAGAAGTCCTCAGCAGGAGTCAGTCGCAGCAGACTCAGCCCCTGAACCCACAAGGTTGTGCAACTTTCAGAGCTTCCAGTGATAACAGCAGCCAAATCAGCGCCAGCgagaacagcagcagcagcagccacagcagcagcagcagcgaggaggagcCCCCGGTCGAGACGCTGAGCTTCTTCAATGAGACGCTGGACCTCTCCCACGAGGACATTCAGCGCACCCTGATAGCCAACATGCCGTTCAATGTGCctccagcaggaggaggagctgcagtaggagcaggaacaggagctggagcttcctcagcaacaacgacagcggcaacatgcagcagcaaggccaagaacaatcaacaggaggaggagaagaaacCCTCTGTGGGAGCCGAGGCTGAAacggagccggaggaggatgAAACAGACGATGTCTTTGCCAATCTGGACGCCTTCGACATGCTCGTGGAGTTTCCCGAACTGGATCTGGACGATAAGCAGGCCCTAAACAACACGGCCCTGGAGCAGGGCTCGTACTTGGGAGACCCAacgccgcagccgcagccccGCAAGGTCCTCAACATATGCGACTTTAGTCCCGAATGGTCGTACACGGAGGGCGGGGTCAAGGTCCTGGTGGCCGGTCCCTGGACGAGCAGCAATTGTGGCGCCTACACCGTGCTCTTTGACGCCCAGCCCGTGCCCACGCAGCTGGTGCAGGAGGGCGTCCTTCGCTGCTATTGCCCCGCCCACGAGGCGGGATTTGTGACGCTGCAGGTGGCCTGCGGAGGCTTCCTCGTCTCCAACTCGGTGATGTTCGAGTACAAGCTGTCCCTGCTGGCGGACGCCCCGTTTGACGCCAGCAGCTCCAACGACTGTCTGTACAAATTCACGCTGCTCAACCGCCTGTCCACCATCGACGAGAAGCTGCAGGTGAAGACcgagcaggagctggccaCCGACCACACCTCGCTCTACCTGGAGCCCAACTTTGAGGAGAAGCTGGTGGCCTATTGCCACAGGCTGATCAAGCACGCCTGGAGCATGCCCAGCACGGTGGCCTCCTGGACGGTGGGCCTGCGCGGCATGACGCTGCTCCATTTGGCCGCCGCCTTGGGCTATGCCAAGCTGGTGGGCGCCATGCTCAACTGGCGGGCAGAGAATCCACATATCATACTCGAAACGGAGCTGGACGCGCTCAGTCAGGATGTGTATGGCTTCACCCCGCTGGCCTGGGCCTGTGTGCGTGGCCATGTGGAGTGCTCGCTGCTGCTCTACAAGTGGAATCACAATGCTTTGAAGATCAAGACGCAGGCTCAGCAAACGCCCTTGGATTTGGCCAGCATGAGGGGCCACAAGCATTTGCTGGCCCAAATGTTTCGGCTGGAGAAGGAGCGCTGCCGGAAGCCACAATTGCGTGGTGGCCTGGCCAATCTCTCAATGAACATGGGTGTTGAAGCGGAGGCGGAAGAGCAGCAGTCACAGCAGAGCTTTGGCAGCTTTGATTTGGAGCTGCAGCGCAAGCATGATGGGGTTTTCCTAAGACCAGTGGCTGTGCACAGCAACCAAAGTCCCCCTAACAGCAGCAGTCGCTACTCCAAGCGCTCTTCCATAGACAGTGGCATCAACATGGATATACGCAGCAAATCAGGCAAGCCCTTGGCCAGGCTGCACAGcAACTTTGAGAGCCATGACAACTATGCCTTGGGCGTGGACTCACCTTTAGACTCGCTGACTGGCACCAACTGCCTGCTGTCGCCTTTGCGCAAAATGGATTTTGCTCTGTGCGAGGTGGTGTCCACGGGCGAATCGAGCCCCGTTAACGACAAAGACATCGATGACAACTCGACGAGCGCCAACGATGTGACCATTGGCAATGACTTGGCCCTGCCCGATGCCGTTGTAGGGGATTCGGATGCCAAAGTGCTGACCCTGGCCGAGCACATAATAGCAGCCATGCCAGAACGTATTAAGAACGAAGCCGACGAAATGATGGTCCTGGGCAGCCCCCTGACAGAACCTCTGACCTCTGAGTCATCGGCCTTGACGGATAGCTTCATGGACCCTTTGCTCGATTCGCTGCCCAACACCCATTTCGACAGTGACTTTAGCTTCGATTTCCATGACCATGGCTATCGCTATCACGATGTCAGCACGCCCTGCTCCAGTCTCAGTCCGGCCAGTTCGGGACCCTTGCAGTCGCCTGCCAGTTACTCCATTCTGGGCACAGATCCCTCGGTCAGCTCACCAAGTCCCCCGCCCTCGACGAAACAGCTTACGGAATTCCTGCACGCCTCCAGCATCTCGCAGTATCCCTTCGAGGCGGACTTCTCGAAGCTAACCCTCACGGATACGGAGCAGCGGGAGCTGTACGAGGCGGCCAAGTGCATACAGAAGGCCTATCGCTCGTACAAGGGGCGGCAGAAGATGGAGGAGCAGAATAAGGAACGCAGCGCCGCCACCGTCATTCAGAACTATTACAGGCGGTACAAGCAGTACGCCTACTACAGGCAGATGACGAACGCCGCCCTGGTTATCCAGCACGGCTATCGCTCGTACAGGCGCAACAAGCGCTTCAAGAAGAGCGGACTGGGCGGCCTGGGCAGTAGCAGTGACCATGGCAGCGTCAGCAGCAACTCGCAGTGCTTGTCCAGCTTCTACGATCATTACAagcaggatcagcagcagcagcacgagaTGGGCTCGCAGCCCAGCACGCCCA
Protein Sequence
MAGYRSLPLAPVAATAAVQPTMGVQVQPTMAAYAHHQSMTAMSNNGIIYQSAVHASIHSLNTVQSQHRSSTTTHHHILATATATAAAAATATATASAAAAAATASAAAAAAAAAVALPTAAATAAAIPQQHAAYGQQHSQQQQQHSQQQQHLQQQQQHMSHQQHQQQQQQQLMAHQQHSVVQQQQHHHLTQQQQQLAQQQQHHHHHHHHHHQQLSLHQNHLYFSGASLGGHHHHHHRQIFSHLQSALMPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHGEWQSKEVRTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDAGCADGKTCTHPVMRRSGAILKSSVQEKRLGEGFNGNTPNVVVASKLYSRWAERPRQHLDGHGQFHNATQQLPQESAIKFQIIPPQQQQQQQQQQQQQQQQQQQQQQQAGHGDGGYQQYRGASQMLAARSNLVMQQQQQQQQQQQQQQYHQQQQQQQQQHLSLQRFVASQSQNSVHLNQQHRLQIANTTITATGRDPAATGAAAAAAAAAAAAVVASNVMDTELIETQSHKITNSGSNNSSSNNSNNSSNGNASKQLAGQTNNELNVVNNNDTGNNNNFMYNHQQQLNASSNNSNSSAQQQQQQQQQQQHYYKLQQTAATPSSGQPQPPVEAMCMSPEHRSSSGSQPPAATSSAGNPTPTSVGSSTSSSLQSIIDGNQQQQITTTSSTAAAATCDNLMSANALSEQDVGSSNNQATEVLSRSQSQQTQPLNPQGCATFRASSDNSSQISASENSSSSSHSSSSSEEEPPVETLSFFNETLDLSHEDIQRTLIANMPFNVPPAGGGAAVGAGTGAGASSATTTAATCSSKAKNNQQEEEKKPSVGAEAETEPEEDETDDVFANLDAFDMLVEFPELDLDDKQALNNTALEQGSYLGDPTPQPQPRKVLNICDFSPEWSYTEGGVKVLVAGPWTSSNCGAYTVLFDAQPVPTQLVQEGVLRCYCPAHEAGFVTLQVACGGFLVSNSVMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQVKTEQELATDHTSLYLEPNFEEKLVAYCHRLIKHAWSMPSTVASWTVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVYGFTPLAWACVRGHVECSLLLYKWNHNALKIKTQAQQTPLDLASMRGHKHLLAQMFRLEKERCRKPQLRGGLANLSMNMGVEAEAEEQQSQQSFGSFDLELQRKHDGVFLRPVAVHSNQSPPNSSSRYSKRSSIDSGINMDIRSKSGKPLARLHSNFESHDNYALGVDSPLDSLTGTNCLLSPLRKMDFALCEVVSTGESSPVNDKDIDDNSTSANDVTIGNDLALPDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHGYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKMEEQNKERSAATVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSGLGGLGSSSDHGSVSSNSQCLSSFYDHYKQDQQQQHEMGSQPSTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00477324;
90% Identity
iTF_00478004;
80% Identity
-