Basic Information

Gene Symbol
-
Assembly
GCA_008042535.1
Location
VNJO01003509.1:127368-132589[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00071 1.2 9.6 0.1 21 45 775 797 764 798 0.85
2 2 0.00018 0.3 11.5 0.1 23 44 1052 1075 1043 1077 0.87

Sequence Information

Coding Sequence
ATGAGCACTCCCGGCAGCGATGTGGCGCTGGTCAAGGCGGCCACACCATCGCCCTCGCCGCTGGCCAAACTTGACGTGGACTTTACGGGCACCAAGTTCGAGATGCACACATCGCTCTCCGACGAGGAGCGTCGCTTCTACCTGAAGGTGTACCCCACCGTGGACGTGGTGAACCAGCGCAAGGTCCACTGCACCGTGTGTCGCCTGCACCTGGGCACTGCCCCCGCCTCCGAGAACAACATCAAGATGCATCCCATCCTGCGTGTGACGCACTGCGTCAAGTGCCATGACTTTTACAACAGCGGCGAGTTCTCCAAGGGCGAGGATGGCTCGGAGCTGTACTGCCGCTGGTGCGGCCAGGGCGGCGAGGTCtactgctgctccacctgccCGTATGTCTTCTGCAAGTCGTGCATCGTGAAGAACCTGTCCAAGGGCGTCATTGTGGACATTGAGCAGAACGAGCACTGGAACTGCTTCAACTGCACCTCCAAGATCCTGTGGCCCCTGCGGGCCCAGCACTGGGCGCTGGTCAACTACATTCAGTCCACAAAGAAAGCTATACAGGCTTCGCAGCTGCCCGAGCTGGAGTCCCGCCGCCAGATGCTCAAGGACAACAGCAACTGCTGCCGCCTGGCCAAGTCAAAGGCCACTGGCCTGTCGGACTCCATGGAGAGCCTGGAGTCCAATGCCTCACGGCGCAGCCAGGGCAGCTCGGTCAACTCGGGTAAGAGAACAATCCCACCCAAACCGAGTCAGGGACCGGCGGCCAAACGCCCGAAATCCTCCAACGACGAAGTGGTCTGTACACCCGATCTGCTGAGCATGCTGGAGCCGGACTGCCAGCTCTCCATGCTGcccaagccgccgccgccgggccGTCAGCCGCCGGGGCCACCAGCTAGCATCACCACCACCCCGAGGATTGTCACCGTCCAGCAGAACTACACGGGACCgagtcccagcagcagcagcagcagcaatggcacCTCTCCCTCGATGGGAGCGCCACGCAACAGCCTGCCGCCGCCCTTAGTGCTCAGTGGCTCGGGGATTCGCTATCGCCAGACCACGCCCAGCGGGGTGACGAGCGTGCGACGCACGGTGGTGCCCAATGCGGTAAGGAACAGTGGCCCCGTCTTCCACACCATCAACGGGTTCCGGGTGGATCTGAATAGTGCGGCGCAGCAGGACTCCTACCGCCTGCCCAATGGCAGGCTAATCCAAGTCAAGCGCCAGATGCCGCTGCCCAACCAAGCGGCGCCCACGTCACCCATGGTCATGCCACCCATGAACTCGGGTGTGGTCATCCGAGCCCGAACCCCAGCTCCAGTGGGAAGGCCGCCCATGCAGGGCAACGCCTTCGGCAGCAACATGGGCATCTACAATCCGCAGAcgaatcagcagcagcgggcacCGCAAATCGTGCGAATCGGTCAGAACCAGGCTGGTCCATCTCCCCAGGCCCCAGCGCCGCCGAATGTCAATGGAGGAGGCGGAAGTGGAGGGCAGACCCTAATGATCACCCCAGTTCCCGCGCCCGCGCAAAAGACCCCAACTCTGGTGCGACACAATTTCCCCAATACCACGCTGGGACAGGCACGCTcgcagctgcaggagcagaTCTTCAGCGCCATGGACATTTGCACCCACCTCACCGGCAAGGTGGTGTCCCTCACCCACTCCAATGCGTACAACCAGGTGCGCAACTATCTGGATCTCAAGGAGCTGTACATCCACATGTCCTACCTGATGACCTACGCCATCGGGCGGTTCAAGCATCTGCAGGAGAAGTGCCTGGTGGACATGCGCGAGATGGGCTTCAAGAACGATGCCAATAGCCTGGAGAATGGTCAGCTGGCAGCCGCCGTGGACTACGTGTGCTATGGCCAGCTGGACGACGTGGATCTCTTCAATACGGGCTGCAACAGCTTCCATAACCAGGTCTATGAGTACCGCAAGAGTCTCCATGCCAACCTGAAGGAAGGCGAGGACTGTGAGCCACTGCCTCCCCTGATGCCGCTCGGCGTGCGAGCTGAAGGCGATCCTATCGATGAGGAGGAACCGGAAGTAGAGCAGGAACAGAAAGAGGATAAGGACGAGGTGAATGACTTTGATTACGATGACGCGGAGGATTTGGACGATGACTTGGACGACGATGATCTGGACAACGAAGAGTGCGGTGAGCTGGGCACCGAGGAGAGCATGAATCGCAACGAACAGGCCCACGCCTACGACCGCAAGCTGACCCGCCTGCTCCGCGAGTATCCCTCGCTCTGGTGCACCCGTCATCCGGACTACGGCAAGAAGGAGGTCACCTTGAAGCAGTGGCGGGTGATTGCCACCCACTTCCCCCGGGGGGATGACATTAAGCTGCGCTGGAAGAACGTCCGGAAAAGGTACGTGCGGATCGAGAGGCGGGTGAAGCAGGGAAAGCGCTTCAAGGGCTACTTCGACAAGGCCACCAACTACTTGGCCAACAGGGATCGCCCCAGGAGCGAGTGGCTGGCCGTGGACTGTGGCGAAGACGACGGCGATGGCTTCGAGCGCAAGCAACTGGACGTCATCGAGAACACCATGGTGGACAAGGAGCAGAAGGTGGCTCCGCCACTAGTTAAACCCAAAGCGAAACCTCGCTTTCCCATGCGACCCCTGGAGGTGCGGGCCATCGATCAGCGCATCATCACCTTCGCCAAGAGCCACCCCGTGCTCTGGCGCAAGTCTACCGACCCGGAGTTCAACAGCATTGACGAGCAGACCAGGAAGTCCTTGTGGCAGAACTTCTGGAAGTCGGCGCCCAACTATGCCTGCGAGTATCTCGTGGAGCGGTGGCAGCAGATGTACGAGATGTACAAGTCCTTCCGCCTCAAGAGCATCAAGGACAAGGGCATCTTTGCGAACCTGGAGCTGAAGTACTCCAAGTACTTGGCCAGCCTGTACTTCCTATACAAGATCGACGAGCAGGACCTGCGCGACGAGTTCGAGCCCCTGCAGGATTGCGTCCCCAATGGCAGCGAGACTGGTGGCAAGCTGAAGGACATGCCCGACGACAAGCAGTTCGCCCAGCAACTGGTGCTGGCCATACGGGCCTATCCCACGCTGTGGAATCCCCGCCATGTGGACTACAGCGATGTGGGGGCCAGGGAGCGGCTCTGGCCGGAGGTGGCCCGGCGGTTGCCACGCTTCAAGCGGGATGCCAGGGCCTGCAAGCTGCGCTGGCAGATGGCCAAGTTCGCCTACGAGTGCTACTGCCGCGAGGTGGAGCGACAGCCGCCGACGCGGGCAAGCGAGCAGAAGCTCCAGAAGCTGCGCGCCAACTTCCCGCTCGAGGAGATGCGCTTCCTCAGCGTCTAA
Protein Sequence
MSTPGSDVALVKAATPSPSPLAKLDVDFTGTKFEMHTSLSDEERRFYLKVYPTVDVVNQRKVHCTVCRLHLGTAPASENNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNEHWNCFNCTSKILWPLRAQHWALVNYIQSTKKAIQASQLPELESRRQMLKDNSNCCRLAKSKATGLSDSMESLESNASRRSQGSSVNSGKRTIPPKPSQGPAAKRPKSSNDEVVCTPDLLSMLEPDCQLSMLPKPPPPGRQPPGPPASITTTPRIVTVQQNYTGPSPSSSSSSNGTSPSMGAPRNSLPPPLVLSGSGIRYRQTTPSGVTSVRRTVVPNAVRNSGPVFHTINGFRVDLNSAAQQDSYRLPNGRLIQVKRQMPLPNQAAPTSPMVMPPMNSGVVIRARTPAPVGRPPMQGNAFGSNMGIYNPQTNQQQRAPQIVRIGQNQAGPSPQAPAPPNVNGGGGSGGQTLMITPVPAPAQKTPTLVRHNFPNTTLGQARSQLQEQIFSAMDICTHLTGKVVSLTHSNAYNQVRNYLDLKELYIHMSYLMTYAIGRFKHLQEKCLVDMREMGFKNDANSLENGQLAAAVDYVCYGQLDDVDLFNTGCNSFHNQVYEYRKSLHANLKEGEDCEPLPPLMPLGVRAEGDPIDEEEPEVEQEQKEDKDEVNDFDYDDAEDLDDDLDDDDLDNEECGELGTEESMNRNEQAHAYDRKLTRLLREYPSLWCTRHPDYGKKEVTLKQWRVIATHFPRGDDIKLRWKNVRKRYVRIERRVKQGKRFKGYFDKATNYLANRDRPRSEWLAVDCGEDDGDGFERKQLDVIENTMVDKEQKVAPPLVKPKAKPRFPMRPLEVRAIDQRIITFAKSHPVLWRKSTDPEFNSIDEQTRKSLWQNFWKSAPNYACEYLVERWQQMYEMYKSFRLKSIKDKGIFANLELKYSKYLASLYFLYKIDEQDLRDEFEPLQDCVPNGSETGGKLKDMPDDKQFAQQLVLAIRAYPTLWNPRHVDYSDVGARERLWPEVARRLPRFKRDARACKLRWQMAKFAYECYCREVERQPPTRASEQKLQKLRANFPLEEMRFLSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480108;
90% Identity
iTF_00609111;
80% Identity
-