Dtan019462.1
Basic Information
- Insect
- Drosophila tani
- Gene Symbol
- -
- Assembly
- GCA_008042535.1
- Location
- VNJO01007960.1:1-5650[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.9e-12 1.3e-08 34.6 0.0 1 40 263 303 263 306 0.90 2 4 2.7e-14 7.4e-11 41.9 0.1 2 39 318 355 317 358 0.94 3 4 6.2e-18 1.7e-14 53.5 0.0 1 45 372 417 372 417 0.98 4 4 6.3e-20 1.7e-16 59.9 0.0 1 43 424 467 424 468 0.97
Sequence Information
- Coding Sequence
- GATCCCACCGAACCGCTCGACATTGACAATCATTTGGCCCAGCAAATCCATCGGCTCGAACAGTCCCCCATGCACTCGATATCCCATCACCATACTGGCGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAGAGCGAGGTGATCGAGGCCAAGCAcctggcagctgctgcccagcAGCATGCCTTGAaccaggcccagcagcagcagcagcagcatgccCATCaccaggcccagcagcagcaccagcaacagcagcaccagcagcaacagcaacagcagcagcaacagcagcatctaCATGCCCAGCAGTTGCAGGCtcagttgcagcagcaacagcagcagcagcagcaacaccaccagcagcaacagcagcaggcggcagccgcggcggccgcagcagcagcagctgctggtgtgCATGGCCAGCATGGGGGACACGTGACGCACGCCGACATTGGCGGGGCCACAGTCATGGAGATCGATCCGAGCCAAATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGGCATATGGacATGTACAATTCGGACACGAGCGAGGATTCAATGATGATCGCCAACGGCTCGCCGCACGATCAGAAGGAGCCGCACTATACGAATTTGGATCAGCAGCACGGtctgggcggcggcagcgtTTGTGGCCCGGGGCcaggtggtgctggtggtggtgggggcATGAGTGGTggggctggctctggctctggcgaGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCATGGAACGAGGATGCTCTGCAGAATGCCTTGGAGGCGTTACGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTTGGCATACCCTCATCGACGCTCTACAAGATTGCCCGGCGGGAGGGCATCCGCCTAGCGGCACCGTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAAGCAAGCGCCGAATTTGGCATACCAACAGgaacaCTTTACGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCGACGCCTTGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCTGTGCGCGTCGGCCAAATGTCCATCAACCAGGCGGCCATTCACTATAACCTGCCCTACAGCTCGCTCTATGGCCGCTTCAAGCGTGGCAAATACGATGTCGTGGCCAATACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAATACCACCGGCAGCATTGAGATTATTGAGCACAGTCAGGAGAATTCGTTGCACATGTTGCAGCAACAGTTCCCGTACAGTCCGTCGCCGCATCCCCCAACGCCGCAGCATCACAGCACGCCGCAGCACCATGGCAccggtggcggaggaggaggaggaggaggcggaggcggagccAGTACTAGTAGcagcgcggcggcggcggcaagcaGCTCGCCCTTTGCCAGCATATCGGCGCTGGTTAGCGgacagagcagcagcagcagtgccccaccaccaccaccgcccacGGGGGCGACAGCAACTGGCACCAGCAAGCGCAAGAAAGCCACCAAGCAAAAGCGTTGA
- Protein Sequence
- DPTEPLDIDNHLAQQIHRLEQSPMHSISHHHTGDESNSNLVQHIKSEVIEAKHLAAAAQQHALNQAQQQQQQHAHHQAQQQHQQQQHQQQQQQQQQQQHLHAQQLQAQLQQQQQQQQQHHQQQQQQAAAAAAAAAAAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHGTGGGGGGGGGGGGASTSSSAAAAASSSPFASISALVSGQSSSSSAPPPPPPTGATATGTSKRKKATKQKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -