Basic Information

Insect: Drosophila takahashii
Gene Symbol: -
Assembly: GCA_018152695.1
Location: JAECXN010000107.1:6837438-6839764[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.03 1.8 9.0 2.5 2 23 305 327 304 327 0.96

2 10 8.1 5e+02 1.3 1.7 2 23 346 368 345 369 0.78

3 10 0.0045 0.28 11.5 0.6 3 23 385 406 384 406 0.95

4 10 1.7e-05 0.001 19.2 0.9 1 21 419 439 419 440 0.96

5 10 0.061 3.7 8.0 1.9 3 23 449 470 447 470 0.94

6 10 1.2e-05 0.00076 19.6 3.3 1 23 476 498 476 498 0.98

7 10 0.00044 0.027 14.7 0.3 1 23 503 526 503 526 0.96

8 10 0.42 26 5.3 0.2 2 23 533 555 532 555 0.94

9 10 1.2 72 3.9 1.7 2 23 562 583 561 583 0.94

10 10 0.26 16 6.0 2.0 1 23 588 611 588 611 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.03	1.8	9.0	2.5	2	23	305	327	304	327	0.96
2	10	8.1	5e+02	1.3	1.7	2	23	346	368	345	369	0.78
3	10	0.0045	0.28	11.5	0.6	3	23	385	406	384	406	0.95
4	10	1.7e-05	0.001	19.2	0.9	1	21	419	439	419	440	0.96
5	10	0.061	3.7	8.0	1.9	3	23	449	470	447	470	0.94
6	10	1.2e-05	0.00076	19.6	3.3	1	23	476	498	476	498	0.98
7	10	0.00044	0.027	14.7	0.3	1	23	503	526	503	526	0.96
8	10	0.42	26	5.3	0.2	2	23	533	555	532	555	0.94
9	10	1.2	72	3.9	1.7	2	23	562	583	561	583	0.94
10	10	0.26	16	6.0	2.0	1	23	588	611	588	611	0.97

Sequence Information

Coding Sequence: ATGGACGCCGCCACATCCCTAGCGGATCCCGCGCTGGCGGCCATGAACAAGCTGAACAAGGGCTCCAAGTGCCGAGCATGTCTTTCGGTGGACCGGAAAACCGTGCAGCTCAGCGCCGAGATCCCCAATCTGCAGAAGTCGCGCACCTACGCGCAGTGCCTGAAGCAGTGCACCCACCTGGACCTGCGGGTCATCAGTCCCGGCGGCTACCTGTGGCCCATGCAGATTTGCGTGCGCTGCTGTCGCGCCTTGGAGGTGGCCATGCACTTCGTGGAGATGGCCCTGGAATCGAATCTCAAGCTCTATGCGGAGGCCAAGAGCGTCAAGCTGCCCAGTCCCGCGAGCGAACTCAAGAGGAAGGCCAGCACCGAGACGCTGCACTGGAATCAGTTCAGCCAGGAATTCGAGCAGTTCGTCGAGGGCTACGAGGGAGTCCCGGGGCCCATTGAGGAGAATGTGCTCTACATGCGGGGCGCCAAGGTGCCTCGACTGGATGCCGACGCTTCGAGCAGCAAGAAGGTGCCCAAGGAAGACGAGGTGATCCTTTTCGATGTCAAGTACGACACCAACGATCTGGAGGAGGAGGACGAGAACGACGGCTCGGATGCCAAGAACAACGAGACCTTCTTCGAGAGCAGTATTACATCTGGAGATGCGCCTGCTGCCACATCGGTGGGCGGAGGAAGTGGCGAGAATAATAACAATTATAATTTCAATAACAAGAACGGCGACATGTCGGATGTGGAGTGCGATCTTATACAACGTGCTCTATATATGACGCTGAACGACGAGGGGAGCACCGAAAGTCCAAAGGAGGAAAGTCATCTTAAAGCCAATGGGGTAGAGGAGCCTTCTTCACTTTCACTACAAGAAAACACCGCCAGCAGCTCGATGGCCAATATACCCACTTTGAAATGCAATATTTGCCAATTTACGCATGACGACGCGAAGCAGCTAAGACGTCATTACAAAAGTATTCACAAAATATCCATGGCCGAAGACGACATAATTGGCCTAAGCAAAAATCAAAACTTCAAGTGCCGACCGTGCAATAGTTATGAGACGAAAGACAGAAGCGAAATGCAGAAGCATCTCATCGACCACCATAAAATAGACGGTGACTTTGAAATGTACTGCTACATGCAGGCCAACTGTCCGGCTTGCGACAGGATCTTCAAGGATCAGCGTTCGGCCAGAAAGCACTACACCAGAGTGCACACTCCTGTGCCGGTGGTGGTGCCGCCGACGGAGACGTTTGCCTGCAAGGAGTGCGACAAGGTGTTCAACCAGAAGGCCGGTCTGCACAGCCACCAGCGCTTTTGCCTGTTCAAGAATGTCGTGCACTGCACCTTCTGCGACCAGGAGTTCAGCAGCATGCGGAAGTACGAGCTGCATCTGCAGCAGCTGCACGCAGTGGAAACGTTGCACGAGTGCGAGATCTGTCGCAGGAGCTTCAAGAGCGCCGACACCCTGACCACGCATCGCAAGCGGCACTCGGAGCGGCACTTCCAGTGCGACAAGTGCTCCCTGAACTATGTAAACTCGGCGGAGCTGCGGGTGCACTACGAACGGGCCCACGTGAGCGAGGAGCCGGTGAGCTGCCTCACCTGTGGCAGCCAGTTCCAAAACGCGGCCCTGATGCGCGAGCACGAGCAGAGGAGTCACCAGAAGCCGAAGGTCTGGCGCTGCGAGGTGTGCAACTTTGAGGCGAAGAGCAGGTGGCACAGGCGGCAGCATCAGTACGAGCACATGGAGTGCCCGTACAAGTGTCAGAGCTGCGCCAGCGAGTTTGCCGATCGCACCAAATTTCGGCAACATTCCAAAAAGGTGCATGGCACCGAGCTGAGCGACGAGCAGCTGGCCGAGATGTTCCGCGAGAAGAAGGGCTACACCAATCGGCACGATGCATTCAACAGGTCGAACAACTCGCTGGAGATACCGGGCTTCACGGAGGACTGCTTCACCGAGCTGACCAGCCTGGGCGTAGACTATGACGACATAACCACTGACCTTTTTGCCGGCTCCACAGCGCTGGACAACCTGCTCAATTTGATACCCTAA
Protein Sequence: MDAATSLADPALAAMNKLNKGSKCRACLSVDRKTVQLSAEIPNLQKSRTYAQCLKQCTHLDLRVISPGGYLWPMQICVRCCRALEVAMHFVEMALESNLKLYAEAKSVKLPSPASELKRKASTETLHWNQFSQEFEQFVEGYEGVPGPIEENVLYMRGAKVPRLDADASSSKKVPKEDEVILFDVKYDTNDLEEEDENDGSDAKNNETFFESSITSGDAPAATSVGGGSGENNNNYNFNNKNGDMSDVECDLIQRALYMTLNDEGSTESPKEESHLKANGVEEPSSLSLQENTASSSMANIPTLKCNICQFTHDDAKQLRRHYKSIHKISMAEDDIIGLSKNQNFKCRPCNSYETKDRSEMQKHLIDHHKIDGDFEMYCYMQANCPACDRIFKDQRSARKHYTRVHTPVPVVVPPTETFACKECDKVFNQKAGLHSHQRFCLFKNVVHCTFCDQEFSSMRKYELHLQQLHAVETLHECEICRRSFKSADTLTTHRKRHSERHFQCDKCSLNYVNSAELRVHYERAHVSEEPVSCLTCGSQFQNAALMREHEQRSHQKPKVWRCEVCNFEAKSRWHRRQHQYEHMECPYKCQSCASEFADRTKFRQHSKKVHGTELSDEQLAEMFREKKGYTNRHDAFNRSNNSLEIPGFTEDCFTELTSLGVDYDDITTDLFAGSTALDNLLNLIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605109;
90% Identity: iTF_00602882; iTF_00605109; iTF_00486871; iTF_00581822; iTF_00548354; iTF_00537093; iTF_00578839;
80% Identity: -