Basic Information

Insect: Drosophila takahashii
Gene Symbol: -
Assembly: GCA_018152695.1
Location: JAECXN010000001.1:9673088-9678651[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1e-07 6.3e-06 26.2 1.8 2 23 128 149 128 149 0.97

2 9 2.6e-07 1.6e-05 24.9 1.6 1 23 155 177 155 177 0.98

3 9 1.2e-07 7.3e-06 25.9 1.1 1 23 183 205 183 205 0.98

4 9 7.2e-07 4.4e-05 23.5 0.7 1 23 211 235 211 236 0.95

5 9 4.3e-05 0.0026 17.9 3.1 1 23 241 263 241 263 0.97

6 9 0.00039 0.024 14.9 3.3 1 23 269 292 269 292 0.98

7 9 0.00029 0.018 15.3 1.5 1 23 298 320 298 320 0.99

8 9 4e-06 0.00025 21.1 0.8 1 23 325 347 325 347 0.98

9 9 0.0042 0.26 11.6 0.3 2 23 354 378 353 378 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1e-07	6.3e-06	26.2	1.8	2	23	128	149	128	149	0.97
2	9	2.6e-07	1.6e-05	24.9	1.6	1	23	155	177	155	177	0.98
3	9	1.2e-07	7.3e-06	25.9	1.1	1	23	183	205	183	205	0.98
4	9	7.2e-07	4.4e-05	23.5	0.7	1	23	211	235	211	236	0.95
5	9	4.3e-05	0.0026	17.9	3.1	1	23	241	263	241	263	0.97
6	9	0.00039	0.024	14.9	3.3	1	23	269	292	269	292	0.98
7	9	0.00029	0.018	15.3	1.5	1	23	298	320	298	320	0.99
8	9	4e-06	0.00025	21.1	0.8	1	23	325	347	325	347	0.98
9	9	0.0042	0.26	11.6	0.3	2	23	354	378	353	378	0.95

Sequence Information

Coding Sequence: ATGGACACCATCTGTAGATTGTGCTTCCAAACGGCAACGTTATTCCAAGTGCCCGGCTATAGCATACCCACGTGCGTCCGCTGCTCGGAGCAGTTGACAAATAATTCCAACTTCCATCAGTCGGCGGCAGCCGCTGCCGCCGTCGCTGCCTCGGCCTCTGCCGCAGTCGCCGCCTCCGCAGCAGCCGCGGCCACCTCCTCATCGACGGCCTCCTCCAGCGACAGCGACGCCATCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCATCCAGTTCTTCCGAGAACCTACAGTCGCAGGACGACTCCGAAGACGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCACTATGCAACAAAACTTTCTCGCGCAAATCCTCGCTCATGACGCACATACGAAATCACTCGGCGGAGCGTAAGTTTGTGTGCACCTACTGCCACAAAGGCTTCACGCAGGCGGCCAACTTGCGGAACCACGAACGCATCCACACGAACGATCGGCCATATCAGTGCGTGGACTGCGGAAAGACCTTCACGCAAATCACCAATCTGAACAATCACCGCAGGCTCCACACTGGAGAACGGCCCTTCGTCTGCAATGAGCCCGAGTGCGGTCGCAGTTTCGCCCAGGTGACGAACCTGAACAACCACATGAAGTCGCACCACAAGGTGCAGCAGTACTGCTGCAACGTGTGCAACAAGAAGTTCACGCAGGTGACCTCGCTGAACCAGCACCTGCAGGCGCACGCCGGGGTCACCGGCTACTACTGTCCGCGGTGTCCGGAGAAGAACTTCAAGCTGCAGTCGCAGCTGCACACGCACATGAAGACCCACGGCCTGGCCTTTCCGTACGAGTGCGACAAGTGCGACGAGAAGTTCCTGCAGCAGGCACACCTCGACCAGCACCTCAAGATGCACGACGAGTTCAAGTTCAAGTGCGACATCTGCCCGAGCAGCTTTAACCAGGAGTCGCTGCTGAAGAAGCACGTGCAGCGGCACGTCGAGGGCCGCTACCTCTCCTGTCCGGTGGCCAACTGCGCCGAGTCCTTTGCGGTGCGCCAGCACCTGTCCAAGCACCTGCTCACCAACCATGCCCACCACGAGTTGCCGCCGCCGAAGCGCTCCAAGAAGACGGGCACTCTGCAGACGTCGCAGCCGCTGGCGATGATCGGCCAGCCGTTGTCCCTGCAACACACGACGGGGCAGCGTGGGCGTCCGCCGAAGAACAAGAACAAGGCGACAGCGCTGGCCGCCACGGCCATCAAGATCGAGATCAACGAACCGCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATGGGACAGGCGGTCAAGGCGCGCTTCATACCCACTAAGTAG
Protein Sequence: MDTICRLCFQTATLFQVPGYSIPTCVRCSEQLTNNSNFHQSAAAAAAVAASASAAVAASAAAAATSSSTASSSDSDAIAXXXXXXXXXXXXXXXXXXXXXXXSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSLMTHIRNHSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLHTGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQHLQAHAGVTGYYCPRCPEKNFKLQSQLHTHMKTHGLAFPYECDKCDEKFLQQAHLDQHLKMHDEFKFKCDICPSSFNQESLLKKHVQRHVEGRYLSCPVANCAESFAVRQHLSKHLLTNHAHHELPPPKRSKKTGTLQTSQPLAMIGQPLSLQHTTGQRGRPPKNKNKATALAATAIKIEINEPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGQAVKARFIPTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00533229;
90% Identity: iTF_00505550;
80% Identity: -