Basic Information

Gene Symbol
-
Assembly
GCA_018152695.1
Location
JAECXN010000003.1:13146910-13149651[-]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 3.2e-15 3.8e-12 46.6 0.1 1 86 98 167 98 168 0.83
2 7 1.3e-08 1.6e-05 25.4 0.1 1 62 195 252 195 268 0.76
3 7 1.8e-11 2.1e-08 34.6 0.1 1 87 271 344 271 344 0.79
4 7 3.8e-16 4.5e-13 49.5 0.1 1 85 367 438 367 440 0.81
5 7 2.3e-06 0.0027 18.2 1.1 1 58 471 520 471 538 0.83
6 7 1.2e-11 1.5e-08 35.1 0.4 1 87 558 627 558 627 0.79
7 7 6.2e-17 7.3e-14 52.1 1.1 1 86 719 791 719 792 0.84

Sequence Information

Coding Sequence
ATGGAAAATATTCAGGTGAAAGATGAACCTAAATCGGAGGACGAGGACTTTCAAATGGAGCAGGAGGAGATTCAAATAAAAATGGAGCCCCTGATGAATGAGGAAGTCCCATCAGAAGAGGATTTCTCTATGCAGGAGGAGGTGCAAATTAAAATGGAGCCTCTGATAAAAGAGGAGGACTCTTCGATGGAGGAAGAGGAATCCTCTGATAAAGAGTATCCTCCATTTCAGGGTAACATTAAACTAGAGCCAGAACTTTCAACTGGCCTCCTCCACCTGAGGAATGCGATCTGTTGCATACCCAATTGCGGGCAAAAGGAGACCAGCGACATCCGTTTGTTCCGCTTTCCCAGCGACGAGGAGTTCCTTATTCAGTGGCTGGTAAACACCCAGGTGAAGCCTCGCCTGGTGAATCCCACAGATCTTTACGTGTGCCAGCTCCACTTTGAACCGGAGGTTATAGGCGAAACCCAGCTTGCTGTCTGGGCTTTGCCCACTTTACGCCTGGGCCACGAGGATTATCTGATTACGGATACAGTTCAGAATTCTGAACCAATCATGCGCTACATCCGCGAGCACTACTGCTCCGTGCTCAGCTGCTTCCGGGCCAAAGGAGAGGGCTTCCGGCTGTACGAGTATCCAGACGATGCGGAAACCTTGGAAAAATGGAGGCGAAGATGCCTTCATGACCCTGGGCAGATAAAAAGATTCGGCTTTCGCTTGTGCTCGTCGCACTTTTCCGCCGACTGCTTTGATCCGGAGACGGGCGACTTGTTTGCCGGTTCGCAGCCAACGAGGGAGCTGTTCCCCTGCCTGGTACCGGGATGTGTGCGCGATGCAGCGCGCACTCCTCTTGGCTACTACAGATTGCCCCGCAACTCCGTTGAAGCGGAGGCTTGGAGTTACAACCTGTACATCCCCTTGACCGCCATCAACCGGGCTACGCAACGCGTTTGCGAGCGGCACTTCGAGGAGGCCTGCTTTACGGAAAACAAGAAATCACTTCGCTGGGGCTCGCGGCCTACGCTATTCCTCGGTCATGACCACGAAGTCCTGCAAAATCCGGAGAAGATACGTTTTCAAACTGAAGGCATTCCCTGCTGTGTGCCCGGCTGTTTACGCCGCCGGATGACGAGGGACCGCACGTTCTCCTCGTTCCCCAGGGACAGGGGTCTCGTGAGAAAGTGGATACACAACCTGCGACTGGAGGTCAGCTTCAAGGAGGTGGACGGCCTGCTGGTTTGCCATGAACACTTCGAGGAGAGCTGCTTTACAGGTGGCGCAAAGTACCTGCGCTATGGCGCCGTGCCAACCAGGAAGCTGGGTCATTCCCACAGCGATTTGGTTGAGTCCGAATATTCGACGACAACCAAATCCCCATATGGTTGGATGAGAAAGAAGAGGGTCAGGTGCTGTCATCCAGGTTGCGGGCGGCATGAGAAGATTGTTTACGATCTGCCGCCGATGGAAGAGCTGAAAAAGGTTTGGGTGAAGCACATGAACCTGAAACACATCTCAGATGACCCCAATAAAGCGCCGCAGCTGTGTGACATCCACTTTATCATCATGTACGAGCACAGTGTGAAGAACTTTCCCGAACATGTGCCCAATCAAATTCTAGACACCAAATACAAGTTGATCCGGAATAAATACACCATGCAGGCCATCAGTTGTTCCGTCAAGGGATGCGATACCTTTATTCCCAGAGACGGTTACACGCTGCACAGCATGAAAAATGTGCAGGAAATTCAGAAGATGTGGCTGGAAAACGGTCAAATAGAGATGAACCCAAGAGGTCGCGTTCGGGTGTGTAGCAAGCACTTTGAAGCGAAATGTTTCAAGAGTCGTCGTCTACAAGGATGGAGTGTGCCCACGCTGCATCTGCCGGGCGAGGCAATCCATCAGAATATCACCGAGGAGCAGTGGATGATCTACAGTCAGGCGGCGAAACCGAGTGAGGTGAAGGAAGAGGAGGAAGTTCAGTGCTCGGATTCGAATTCCATTGACGGGGAAGGCAGCCTTGGAATGGGGGAGGAGGAGCTCAAGGATCAGACCCTGGAAGTGGTCCTCGAAGTGGCGCCCAATCAGAGATCCTACCCAGAACAGACCACTGAGCAAATCCTCTCCAAACCGAAGAAGTTTAATGCGAATCGCTGCGCCGTTCCGGGATGCCGGATGACTTCTAAGGACGTAAACCGAAAATTCCGGCTCCACAAACTGCCCGATTCCGATGAAACCTCCGAGAAGTGGCTGCACAATACGCAAATAAAGGTGGGCGAGGAGCACTGGCCCAATATTCGCATCTGTGCGTTACATTTCGAGCAGGATTGCTTTCAAGGATCCAGGTTGAAACCGGGAGCCGTGCCCACGCTTTGTTTGGGAGCTAAATCACTGGAGTGGATGCACCAAAGTGAGTGGCGGAAAAGAACAAATCCACGTACGCCCCGATTTCCAAGGCCAGCAAATTGCACAACTGTCGACTTTAATTATTTTAATGAAAGTGAATAA
Protein Sequence
MENIQVKDEPKSEDEDFQMEQEEIQIKMEPLMNEEVPSEEDFSMQEEVQIKMEPLIKEEDSSMEEEESSDKEYPPFQGNIKLEPELSTGLLHLRNAICCIPNCGQKETSDIRLFRFPSDEEFLIQWLVNTQVKPRLVNPTDLYVCQLHFEPEVIGETQLAVWALPTLRLGHEDYLITDTVQNSEPIMRYIREHYCSVLSCFRAKGEGFRLYEYPDDAETLEKWRRRCLHDPGQIKRFGFRLCSSHFSADCFDPETGDLFAGSQPTRELFPCLVPGCVRDAARTPLGYYRLPRNSVEAEAWSYNLYIPLTAINRATQRVCERHFEEACFTENKKSLRWGSRPTLFLGHDHEVLQNPEKIRFQTEGIPCCVPGCLRRRMTRDRTFSSFPRDRGLVRKWIHNLRLEVSFKEVDGLLVCHEHFEESCFTGGAKYLRYGAVPTRKLGHSHSDLVESEYSTTTKSPYGWMRKKRVRCCHPGCGRHEKIVYDLPPMEELKKVWVKHMNLKHISDDPNKAPQLCDIHFIIMYEHSVKNFPEHVPNQILDTKYKLIRNKYTMQAISCSVKGCDTFIPRDGYTLHSMKNVQEIQKMWLENGQIEMNPRGRVRVCSKHFEAKCFKSRRLQGWSVPTLHLPGEAIHQNITEEQWMIYSQAAKPSEVKEEEEVQCSDSNSIDGEGSLGMGEEELKDQTLEVVLEVAPNQRSYPEQTTEQILSKPKKFNANRCAVPGCRMTSKDVNRKFRLHKLPDSDETSEKWLHNTQIKVGEEHWPNIRICALHFEQDCFQGSRLKPGAVPTLCLGAKSLEWMHQSEWRKRTNPRTPRFPRPANCTTVDFNYFNESE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-