Basic Information

Gene Symbol
-
Assembly
GCA_018152695.1
Location
JAECXN010000003.1:8976899-8981192[-]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 8.9e-13 1.1e-09 38.7 0.9 1 87 64 131 64 131 0.83
2 11 2.3e-09 2.7e-06 27.8 0.4 1 86 164 235 164 236 0.77
3 11 2.1e-08 2.5e-05 24.8 0.9 1 86 243 306 243 307 0.76
4 11 3e-13 3.6e-10 40.3 4.0 1 86 320 389 320 390 0.77
5 11 7.3 8.6e+03 -2.6 0.1 18 45 437 465 424 472 0.59
6 11 9.3e-12 1.1e-08 35.5 3.3 1 87 488 554 488 554 0.83
7 11 2.4e-09 2.9e-06 27.8 0.4 1 86 589 660 589 661 0.79
8 11 3.1e-12 3.7e-09 37.0 1.8 1 87 674 744 674 744 0.77
9 11 4.3e-10 5.2e-07 30.1 4.9 6 85 765 829 761 831 0.74
10 11 0.00031 0.37 11.4 0.2 1 58 860 909 860 926 0.82
11 11 1.9e-12 2.3e-09 37.7 0.2 1 86 950 1020 950 1021 0.82

Sequence Information

Coding Sequence
ATGGATTCGGAACTAGCCATCCAGGATCAGTCGTCCCTGAACCGAAATGAGACATCCTTATCCTTAATTCACTCAAAAAGAAAGTCAACAGATACTGATCCTCCAGATAGTAACCTGAGCAAGAAGCAAAGGACATTTGCTTTGCCCAAAAATCGTCTCCCGCGAGACTCCACGGACTGGTGGAGGAAATGCTGCATAGCCACCTGCGAGGAAAACCATGAGATACTCCATCGATTTCCCAGGGACGAGCCGCAGTTGCTCCTGTGGCTGGCCAACACCAAGCAGCAGCCTCGTCTGCTGCCTCCCCGTCGCCTGTCCATATGCCATTCCCACTTTGAGCCCGAGGTCATCTTGCAGAATCAAATTACCAGCTGGGCGATTCCCACCTTGAACCTCGGCCACAATGGCTGCGTTATTCCCAACACCAGGAACAGGGGCAGAAACATTCAGGATCTGGATGAGGCACTCAAGTATATCCGGCAGCACCACTGCTCTGTGATCAGTTGCTTTCAGGCCGAAGGAGAAAACCTGCGACTCTTTAAATACCCAACAGATACGGCCATAATACGGATTTGGTCAGACAGGTGCAAGCATCGCTCCTTGCAGGCCATACATTACGGGTTTAAGTTGTGCCAGGATCACTTTGCACCGCAGTGTTTCCATCCAGACACTGGTGACCTATTTGAAGGCTCGTTTCCCACTCTTCAACTCGTTGCGAATGTTCAGTGCGTGGTGCCAAACTGCAAGCCACGTAGGCCGGATGAACACACTCGCTACTTCTGTCCACCTGAAGCCTGGAGTCATGTCCTGGGTATGCGTTACTCGGATCTTAAGGACGAGCTCGTTTGCCAGCGTCACTTCGAGCCGCACTGCTTTGAAAGCCCCCTTGTCCTGCATCCCGGCGCGATTCCAACTCTCTTACTGGGCCAGGAAAGCCTCATGGTGGAAATCCCTGAATGCTGCGTACCTGGCTGCAAGGAGAAGCTAAAGCCCGAGCAGCACTTCAAGTTCCCGGACAACCCAGTTTTGTGCAATAAGTGGACGGGCAATTTGCGATTAGATGTAGGCTGTACGCCGCTAGAAGATATGAAGATATGCAAAAGGCACTTTGAAAAGAGTTGTTTTAAATCATCAAGCACATTACACGTTGATGCTATTCCCACATTGGAGCTGGGCCACTCCCATCCGGTTATCTTCAGGAATCATATGGAAAATTCAAAGAAACTTGTCGAAGGTCACGAGAAGATTTGGCGACAGGAAGGAGACCCAAACGAAAATGAGAAGGACGACGAAACGGATAACTTGGTTTTGGAAACCATTAAATTGGAGAAAATCGATTCAGAAGCGGATAAATGGTTTCAAGATGCCTTCAGGAGGAACCAAAACGATTCCGCCAAGGATCTAAAGGAAACTTCACCAACATTATCTACAAGCCAAAAAAGTACTATTCACGAGGAAATATGTTGCATTGCCACGTGCAAAAAGCGTGAGTTACTCCACAATTTTCCCAGCAAGGAACAGCATTTGTTGATGTGGCTGGTAAATACACAGCAGAAGCCGCGTTTCAGGAATCCGACGGATCTGTTTTTGTGCCAATCCCACTTTGAGCCCGATTGCATTTACTTAAACCAGCTCCGCGACTGGGCGGTTCCCACCTTGAACCTCGGCCACAATGGACACGTTATCCGCAATGTCAGGCCCAACGGAAAGCCTGCCCACGCCCAGGATATCTATCGTCAACTGCTGAACGTGCGGGAGCACCACTGCTCCGTGCTCAGTTGCTTTCAGGAAGAAGGAGACGGAGTGCGACTGTTCGAATATCCCAAGAGTACCACCGATAGTCGCGTTTGGGCAGCGAAATGCAATCATGATTCTTTGCAGGCCGTAAGAGATGGGTTCAAAGTGTGCCAAATTCACTTTAAATCCAAGTGTTTTCATCCGGAGACGGGATATTTAAAAGAAGGGTCTGCTCCCACTCTAAAACTTAGAACGGCTGTGAGTTCGCTGACAAACATCCAATGCCTGGTTCCCAACTGTGAGAGAAGGATAACAGATGTGGACACCCATTACCTGCGAGTTCCGACGAACCGCAGGCAACTGGAGAAATGGTGCAAGATCTTTGCCAAGTCTCCCGCCGACCTAATGAATCAGCACATTTGCGATCGGCACTTTCAGCGGCAGTGCTTTATTCGAAAAGGTGAACTGCGGCGTGGCTCGATTCCAACGCTCTTTCTGGACGAAGAACTGGAACACCGACCCGCCAGCTCGAATGTAAATTATTACTGCGTGGCCTGCAGCAAACGCTCTTGTGAATCCAGGGGGTTCTATAATTTTCCCCAGTCGCAAGTACATTTCAAACAGTGGTCGCACAATTTACGCCTCGACTTGGACAAGAAGCAAAGGGAAACGCTTAAAGTGTGCAAGTGTCACTTTGAGTTCTTTTGCTTCGTCAATAGCTATCAGCTGCTCCCTGGTGCTATACCCACCAGGAAACTGCGCCACAGATATAAAGATCTTTACACACAGGACGAGGAAACCATAGAAGAAGACTGGAAGGTTGTCGATGCGAAAGAAAGGTGCTGCTATCCTGATTGCTTGGAGTTCGACAGGGAATTGTTTTACCATATTCCCAGGGAAAAATGGCGCCTGGAGTGGCTGCAATACTTGAGTATCGATGAGGCTGCGGCCGCTTCCAAGGATTCCCTGCAGGTCTGCCCGCTGCACTTGGTAATGCTCTATGAACATTGTGCGAGGAGCCCAATATTGCGAAAGGCACTCGATGCAGAACAATTTCTGGACAAAATGTACGGGGAGATCCTAAGGAGCGGCCACTTGGACCGCTTCAGATGTGCTGTCAAAACGTGCAACATGTTGAGACCCAGGGATGGAGTCACCCTTTACTATCTGCCATCAATGCCGGAGATTCTGCAGAGGTGGGCGGATAACTGCCAGCTAAATATAAGTGGTGATTTGACCAACATGCGGGTGTGCCGCCGACACTTTGAGCCGGACTGCCTCCGCAATGAGGTTCGCTTGTTCCGCTGGAGCGTACCCACATTGCGTCTGCCTGGCGAGGCAGTGCACCAGAATCCAGACAACGTAGAATGGAGGATTCTGCGCAGCCACGAGGCGCTTCTACTGAAACAGGAAAAAGAAAAGAGAAAATTGGAAAAATCTCTTTTAAAACCCTTGGTTAAGGCGGAGTATTCCGATTCAGAACCAACAGAACCAAGCAACTTGCTTAGCGAACCCTATGTTAGAATGGAGCGAATCGATCTGAAAGAGGAGATGGAGGCGGATCAGCAGTGTGAATTAACTATGCCCCATCTGGAGGTGGAATTGGGGATCAAATTAGAAAAAGAATAA
Protein Sequence
MDSELAIQDQSSLNRNETSLSLIHSKRKSTDTDPPDSNLSKKQRTFALPKNRLPRDSTDWWRKCCIATCEENHEILHRFPRDEPQLLLWLANTKQQPRLLPPRRLSICHSHFEPEVILQNQITSWAIPTLNLGHNGCVIPNTRNRGRNIQDLDEALKYIRQHHCSVISCFQAEGENLRLFKYPTDTAIIRIWSDRCKHRSLQAIHYGFKLCQDHFAPQCFHPDTGDLFEGSFPTLQLVANVQCVVPNCKPRRPDEHTRYFCPPEAWSHVLGMRYSDLKDELVCQRHFEPHCFESPLVLHPGAIPTLLLGQESLMVEIPECCVPGCKEKLKPEQHFKFPDNPVLCNKWTGNLRLDVGCTPLEDMKICKRHFEKSCFKSSSTLHVDAIPTLELGHSHPVIFRNHMENSKKLVEGHEKIWRQEGDPNENEKDDETDNLVLETIKLEKIDSEADKWFQDAFRRNQNDSAKDLKETSPTLSTSQKSTIHEEICCIATCKKRELLHNFPSKEQHLLMWLVNTQQKPRFRNPTDLFLCQSHFEPDCIYLNQLRDWAVPTLNLGHNGHVIRNVRPNGKPAHAQDIYRQLLNVREHHCSVLSCFQEEGDGVRLFEYPKSTTDSRVWAAKCNHDSLQAVRDGFKVCQIHFKSKCFHPETGYLKEGSAPTLKLRTAVSSLTNIQCLVPNCERRITDVDTHYLRVPTNRRQLEKWCKIFAKSPADLMNQHICDRHFQRQCFIRKGELRRGSIPTLFLDEELEHRPASSNVNYYCVACSKRSCESRGFYNFPQSQVHFKQWSHNLRLDLDKKQRETLKVCKCHFEFFCFVNSYQLLPGAIPTRKLRHRYKDLYTQDEETIEEDWKVVDAKERCCYPDCLEFDRELFYHIPREKWRLEWLQYLSIDEAAAASKDSLQVCPLHLVMLYEHCARSPILRKALDAEQFLDKMYGEILRSGHLDRFRCAVKTCNMLRPRDGVTLYYLPSMPEILQRWADNCQLNISGDLTNMRVCRRHFEPDCLRNEVRLFRWSVPTLRLPGEAVHQNPDNVEWRILRSHEALLLKQEKEKRKLEKSLLKPLVKAEYSDSEPTEPSNLLSEPYVRMERIDLKEEMEADQQCELTMPHLEVELGIKLEKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-