Dtak012386.1
Basic Information
- Insect
- Drosophila takahashii
- Gene Symbol
- -
- Assembly
- GCA_018152695.1
- Location
- JAECXN010000121.1:7109264-7111339[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-16 3.7e-13 48.7 0.0 2 45 352 395 351 395 0.95 2 3 0.035 67 3.1 0.0 28 37 425 434 420 439 0.89 3 3 3.2e-20 6.2e-17 60.8 0.0 2 42 461 501 460 504 0.95
Sequence Information
- Coding Sequence
- ATGAATCACCTCAAGTGGATGGGACACTCGTCCACGATAATGGACATCCAGCGCTCGCTGCGCAACGACAACCAGAACTGCGAGGTGGTCCTGGCCTCCAGGGACGGCGTCCGGGTGCGCGCCCATCTCTTCGTGCTGAGCACCTGCAGCGAGCTGATGCGCAACATTCTGGTGGACGTGCCGCGCGGCCAGGAGGCCACCATTGTGCTGCCCGACATCCGCGGCGATCTGCTCGAGGCAATGCTCTCCTTCATCTACATGGGCGAAACCAGTCTGCCCTCCGCCTCGCTCTCCGAGTTCCTCGAAGCCATCAACCTGCTGGGCATCAAGTCGGCCATCAGTTTCGAGTGCAACCCCACGGCCAGTCCACCCGGCGGCGGCGGCGATGTGGAGAACGCTTCGTTGGCCGTGGAGACGGCCAAATCGATTACAGGTCTGCAAATAGCCGAAGCGGAGCTGCTGGACGACGAGGAGGAGCCACAGCCGACGGTCAGCGTGCCTGCCTCTGTGCTGGCGGAGCCACAGCATCAGACCAGCCGCTCGCTGGAGTACCTGGATGTCTATGAGCCGCCCAAGATCACCTACTCCATCGAACACATGGACGGCAACTCCAGCGGCAATCAGTTTATACTCACCGAGAACACCGGCACCTTCACCATCACCCAGTCGGCGTCCAGCTTGTCCAAGATGGGCGGCGACGATGCGGCCGCCGAAGTGGAGCTGGTGGACGACGATGTGGAGGCGGACATTGCCGAGGAGGATTCGGAGGAGCACGAGACACAGATGATCGAGGAGGACTTTGCGCCCACCGATCCACTGATCGAGCTGGGCACCGCCACCGAAATGGACGAGGACGACGAGGAGGAGGAGGAAGTGACCGGCGAGCTGATGGACGAGGAGATCGAGGAGGAGGAAAAGCCACGCAAGTTGGGAGGCGGCGGAAAGCCACGCGGTCGTCGTCCTATGAACATCAAAAGCGAGAAGCGATCGCCGCACAAGCCATCGCGACTGCAGCAGTTTGTGGCGCTCAAGCGGGAGGTGAAAGACGACATCAACGACGCCTTGGATCTGGCGGCGGATGCGGTGATCTTAGAAGGATTGAGCCTGCAGAAGGCCGCCGATCGGTTCGACATCTCGAAGACGGTGCTGTGGCGACGCGTGCGCACCAATCCCGCCTACATGCGCAACAACCGGGAGCGACCCTCCCTGCTGGAGGCCTACGAGCGTCTGAAGAACGGCGATTCCCTTAAGAGCATCAGCACGGAGCTGCAGATCCCCATGTCCACGCTGCACCGGCACAAGGTGCGTCTGTCGGCCCAGGGACGCCTGCCCGACTTTGTGGCCTGCCGGCGGCGGGATAGTACGCCCAAGGATGAGCTAAGGGACAAGTTGGCCAAGGCCGTGCATGCTTGCCTGAACGAGGGAATGTCCCAGAACCACGCGGCCAACCTGTTCGAGATCCCCAAGAGCACGCTCTGGCGACACCTGCAGCGACGCATGTCCAACCAGGAGCGCAAGGTCAAGAAGGAGCTGAAGGACGAGTACGAGGACGATCTGCTAAACTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRSLRNDNQNCEVVLASRDGVRVRAHLFVLSTCSELMRNILVDVPRGQEATIVLPDIRGDLLEAMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPTASPPGGGGDVENASLAVETAKSITGLQIAEAELLDDEEEPQPTVSVPASVLAEPQHQTSRSLEYLDVYEPPKITYSIEHMDGNSSGNQFILTENTGTFTITQSASSLSKMGGDDAAAEVELVDDDVEADIAEEDSEEHETQMIEEDFAPTDPLIELGTATEMDEDDEEEEEVTGELMDEEIEEEEKPRKLGGGGKPRGRRPMNIKSEKRSPHKPSRLQQFVALKREVKDDINDALDLAADAVILEGLSLQKAADRFDISKTVLWRRVRTNPAYMRNNRERPSLLEAYERLKNGDSLKSISTELQIPMSTLHRHKVRLSAQGRLPDFVACRRRDSTPKDELRDKLAKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRRMSNQERKVKKELKDEYEDDLLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00605685;
- 90% Identity
- iTF_00605685;
- 80% Identity
- iTF_00605685;