Basic Information

Gene Symbol
ct
Assembly
GCA_018152695.1
Location
JAECXN010000001.1:19050308-19071407[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.4e-27 4.1e-23 81.0 0.0 3 72 645 715 643 720 0.95
2 3 5.3e-32 4.1e-28 97.0 0.0 3 77 1110 1185 1108 1187 0.96
3 3 3.2e-31 2.5e-27 94.5 0.0 3 76 1383 1457 1381 1460 0.96

Sequence Information

Coding Sequence
ATGGTTTGGGGGGCTTCACTGTACCTGGCGGCATTTGGCGGTTGGATTAAAGCACTTCTGGACGAACTGCAACGCCTGAGGGCGCTGGAGCAGACGCATCTGGTGCAAATCCAGCGACTGGAGGAGCATTTGGAGGTCAAGCGCCAGCACATAATGCGATTGGAGGCGCGTCTCGATAAGCAGCAGATCAATGAGGCTCTCGCCGAGGCGACCGCTTTGGCGGCAGCAGCTGCCACCAATAACAACAATAATAGCCAGAGCAGCGACAACAATAAGCAGAGCAACAAGGCAGGAGAAGCCGCCACACCGCTGGATGCGTCATCATCCGTCATCAGCATTGGCGATCTGCCGGAGGCCACAAAGACTTCAGCAGCAGTTCCTTCTGCCGCCGCCGCTGAGGATGAGGATGAGGACGAGGATCAGGCCATGCTGGTTGACTCCGAGGAGGCGGAGGAGAAGCCAGAGGAGCACCAGCGGGGTGACGACGACGAGGAGGAGGAGGAGGAGGCCGAGGATCGGGAGGCGGTCAATGCCACCAACACCACCACCACCACCGATAGCAACGAGCTCAAAATCAAAAAGGAACAGCACAGTCCGCTGGATCTGAATGTGCTCAGTCCGAATTCAGCTTTGGCCACTGCAGCTGCGGCCGCCGCTGCCGCCGCCTGCGCCAACGACCCCAACAAATTCCAGGCGCTGCTCATCGAGCGGACCAAAGCCCTGGCCGCCGAGGCGCTCAAGAATGGCGCCAGTGATGCCATCAGCGAAGAAATCAACCGAAATGATGAAGAAGAAGAAGAATCGCCAGCAGCTGTAAATGCAACTCTGGCCACACTGACAACACCTGAAACAACAAACGAAACGGAAACGAAAACGAAAAATGACATGGCGCCCAAGCAGGAAATCGAAGATGTGGATGAGGATGAGGATCATCCTTCGGTCAATCTGGTCAACGATTATTGGCGACGTGGCTTTGAATCCTCAGCGAATAATAATGTGAATGCAAATATGAATACCACTTTGAATACAAATGCACAAATGCCAGGGAGCAAAACGCCAATAAATTATCAAAATCTTAGGGCCGAGCAGCAGGCACAATTGCTGCCGCCGCCGCCACCACCGTTGCCCCCCCAGCAACATCTACACTTTCCACAGCAACAACAACAACAACCGCAGCAACAACAACAGCAGCAACATGGACCATCGTCCACAGCCCTGCTTAGTCAACTGGTTAACTCAACATTTTCCAACTCTTCCAACTCTTCTCGCCTAGATGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCATCATGGCCATCACTTGCATCATTTGCATCACTTGCATCACGAATCCAGTTCGAATTCGAGTACACCTTCGGTTACGGCGGCGTCTGGGAACGGTGGTAGCAACAATGCTGGCAACCAGGCCACCCAGGCCACCGCTCAACTGGCCGCCAGTTTGGCCAGCACACTGAACGGAGCACAGAAATCGCTGCTGCAGGAGGATAGCAATGGACTGGCCACCGCCGCCGCAATGGCCGCTCATGCCCATTTGGGTCCAGTATCCGGTTTTCTGCCCGGCCTACCGGCCTTTCAATTTGCCGCCGCCCAAGTGGCCGCCGGTGGTGGCGATGGACGTGTGGGTCACTATCGTTTCGCCGATTCGGAACTGCAATTGCCTCCCGGAGCCTCGATGGCCGGCCGTTTGGGTGAATCACTGATACCCAAGGGCGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGATAAGTACGCCAATCAGGCGCTGGATACCCTGCACATTTCGCGTCGCGTTCGGGAACTCCTGTCGGTGCACAACATTGGCCAGCGGCTGTTTGCCAAATACATATTGGGCCTGTCGCAAGGCACCGTCTCGGAGCTGTTGAGCAAACCCAAGCCATGGGACAAGCTGACGGAGAAGGGACGCGATAGCTACCGCAAAATGCACGCCTGGGCCTGTGACGATAATGCCGTCATGCTGCTCAAATCGCTGATACCCAAGAAAGATTCTGGCCTGCCGCAGTATGCGGGTCGTGGAGCCGGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGACCGGATTGCCCACATCCTCAGCGAGGCCTCGTCGCTGATGAAGCAGACGAGCGTGGCCCATCGGGAGCATCGGGAGCTCCAGCAGGAGCGTCGCAGTCACGGCGAGGATTCGCACAGCAACGAGGACAGCAAGTCGCCGCCGCAGAGCTGCACCTCGCCCTTCTTCAAGGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTCCCGAACAGGCAGCGGCCGCCCAGCAGAGGGAAAGGGAGAGGGAGCAGCGGGAGAGGGAGCGAGAGCAGCAGCAACGACTGAGGCACGAGGACTTGGCCCAGGACAAGATGGCCCGGCTCTACCAGGAGCTAATTGCACGCACTCCCAGGGAGACGGCCTTTCCAAGCTTCCTCTTCTCACCCTCGCTGTTCGGAGGAGCCGCCGGCATGCCGGGAGCGGCTGGCAATGCCTTTCCCGCCATGGCCGATGAGAATATGCGTCATGTCTTCGAGCGCGAGATCGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCCGCCGCCCAGTTCCCCAACTTCTCGAGCCTGATGGCCCTGCAGCAGCAGGTGCTCAATGGCGCCCAGGATCTCTCGCTGGCCGCCGCGGCCGCCGCCTCCAAGGACATCAAGCTGAATGGCCAGCGATCCTCGTTGGAGCACAGCGCCGGCAGCAGTAGCAGCTGCTCCAAGGATGGCGAACGGGAGGATGGCTACCGGAAGTCCGAGGGAGGCGGTACACCAGCTCCCCCAGCACCGCCAGCGGGAGCAGCTCCACTGCCCAGCGGAGGAGCACCAACTGGAGCACCAGGTGGAGCAACCAGCGGCAACTCGGCGGCGCCCAGTCCGCTGAGTAACTCCATCTTACCCCCAGCTTTAAGCAGCCAAGGAGAGGAGTTTGCGGCCACGGCCAGTCCGCTGCAGCGAATGGCCTCGATAACCAACTCGCTGATCACCCAGCCGCCGGTGACGCCGCATCACAGTACTCCACAAAGACCCACCAAGGCGGTCCTGCCGCCCATCACCCAGCAGCAGTTCGATATGTTCAACAATCTCAACACGGAGGATATCGTGAGAAGGGTCAAGGAGGCGCTCTCGCAGTACTCCATTTCCCAGCGTTTGTTTGGTGAATCTGTGCTGGGATTATCGCAGGGTTCCGTCTCTGATTTGCTGGCGCGGCCCAAACCCTGGCACATGCTCACTCAAAAGGGTAGGGAGCCCTTCATCCGCATGAAGATGTTCCTGGAGGACGAGAATGCGGTGCACAAGCTGGTGGCCAGTCAGTACAAGATTGCCCCCGAGAAACTGATGCGCACGGGCAGTTACAGCGGCAGTCCGCAAATGCCGCAGGGATTGGCCAGCAAAATGCAGGCGGTGGGCTCCCTGCCCATGCAGAAGATGATGAGCGAGCTGAAGTTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGCTCACCTCGCCCGGCCTGCCGCCCCAGCATGCCATCAGCCTGCCTCCGTCGGCTGGCAATCCGAGTTCCAATCCCAATCCGAGCAGCAATCCCGGCGAGAAGAAGCCCATGCTGATGCCCGTGCATGGCACGAATGCCATGAGGAGTCTGCACCAGCACATGTCGCCCACGGTCTACGAGATGGCTGCCTTGACCCAGGATCTGGATACGCATGATATTACCACCAAGATCAAGGAGGCCCTGTTGGCCAATAACATTGGCCAGAAGATATTCGGTGAGGCTGTGCTGGGACTCTCGCAGGGATCCGTCTCCGAGCTGCTAAGCAAACCGAAGCCGTGGCATATGTTGTCCATCAAGGGAAGGGAACCCTTCATTCGGATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAGCGATTGCAGCTGCTGAAAAATGAGCGGCGGGAGGCGAGCAAGCGAAGGAGGAGCACGGGACCGAATCAGCAGGACAACAGCAGCGATACCTCGAGCAATGATACCAATGATTTCTATACCAGCAGTCCGGGACCGGGTTCAGTGGGTTCCGGTGTGGGTGGAGCACCGCCGAGCAAAAAGCAGCGTGTGCTCTTCTCCGAGGAGCAAAAGGAGGCTCTCCGATTGGCCTTTGCCCTGGATCCCTATCCCAATGTGGGCACCATTGAATTTCTGGCCAATGAATTGGGTTTGGCCACTCGAACCATCACCAATTGGTTCCACAATCATCGCATGCGCTTGAAGCAACAGGTTCCCCATGGACCCGCCGGCCAGGATAATCCGATACCGAGTCGCGAGAGCACCAGTGCCACGCCCTTCGATCCCGTCCAGTTCCGCATCCTGCTGCAGCAGCGTCTGCTGGAGCTGCACAAGGAGCGGATGGGCATGAGTGGTGCACCGATTCCGTATCCCCCGTACTTTGCAGCTGCTGCCATTTTGGGACGCAGCTTGGCGGGGATTCCTGGAGCAGCGGCGGCGGCAGGAGCAGCTGCAGCAGCGGCCGCCGTGGGAGCAGCCACCGGTGATGAACTGCAGGCCCTGAATCAGGCCTTCAAGGAGCAGATGAGCGGATTGGATTTATCCATGCCCACGTTGAAGCGCGAGCGCAGCGATGACTATCAGGAACTGGACTTGGAGCTAGAGGGAGGTTCGGGTCACAACCTCAGCGACAATGAGTCCGAAATGGAGGGTGGTCAGGAGGAGGATAAGACAACCAGCGATTACGAGAAGGCTTTGCACAAGTCCGCTTTAGCAGCCGCCGCCGCCTACATGTCGAATGCGGTGCGCAGTTCGCGACGCAAGCCGGCTGCCCCCCAGTGGGTCAATCCCGCCGGTGCAGTGACCAATCCCAGTGCCGTCGTGGCAGCCGTGGCAGCGGCAGCAGCAGCAGCCGCAGCAGCGGACAACGAGCGCATCATCAACGGGGTGTGCGTGATGCAGGGATCGGGATCCTCCTCCTCCGTCGAACCAACGGATAGTGGGGCCACAAACGAGGAGGCGGAGGAGCATGAGCATGCCCAGCTGGAGATTGATCAGCGGTTCATGGAGCCGGAGGTGCACATCAAGCAGGAGGAGGACGACGACGAGGAGGAGCAACCAACGGCGACAGCGGAGAACAGCGGCGAGGAGAACAGCGAGCTGAAGCTGAAAGTGGTCAACGAGGAGAAGCTGCGAATGGTGCGGGTGCGACGACTGAGCAGCAATGGCGGTGGCTCCTCCGAGGAGATGCCCGCCCCGCTGGCGCCTCCACCTTCAGCAGGAGCGGCCACTTCATCATCCAGTGGAGCAGTGGAAAGCACCAGTTGCAGTAGCAGCTCCACACCGGCAGTGACCACAGCAGCAGCCGCCGCCAGTTGGAATTACTAG
Protein Sequence
MVWGASLYLAAFGGWIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAAATNNNNNSQSSDNNKQSNKAGEAATPLDASSSVISIGDLPEATKTSAAVPSAAAAEDEDEDEDQAMLVDSEEAEEKPEEHQRGDDDEEEEEEAEDREAVNATNTTTTTDSNELKIKKEQHSPLDLNVLSPNSALATAAAAAAAAACANDPNKFQALLIERTKALAAEALKNGASDAISEEINRNDEEEEESPAAVNATLATLTTPETTNETETKTKNDMAPKQEIEDVDEDEDHPSVNLVNDYWRRGFESSANNNVNANMNTTLNTNAQMPGSKTPINYQNLRAEQQAQLLPPPPPPLPPQQHLHFPQQQQQQPQQQQQQQHGPSSTALLSQLVNSTFSNSSNSSRLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHGHHLHHLHHLHHESSSNSSTPSVTAASGNGGSNNAGNQATQATAQLAASLASTLNGAQKSLLQEDSNGLATAAAMAAHAHLGPVSGFLPGLPAFQFAAAQVAAGGGDGRVGHYRFADSELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGAGGDDSMSEDRIAHILSEASSLMKQTSVAHREHRELQQERRSHGEDSHSNEDSKSPPQSCTSPFFKVXXXXXXXXXXXXXXXTPEQAAAAQQREREREQREREREQQQRLRHEDLAQDKMARLYQELIARTPRETAFPSFLFSPSLFGGAAGMPGAAGNAFPAMADENMRHVFEREIAXXXXXXXXXXXXXXAAAAQFPNFSSLMALQQQVLNGAQDLSLAAAAAASKDIKLNGQRSSLEHSAGSSSSCSKDGEREDGYRKSEGGGTPAPPAPPAGAAPLPSGGAPTGAPGGATSGNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQAVGSLPMQKMMSELKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTSPGLPPQHAISLPPSAGNPSSNPNPSSNPGEKKPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPAGQDNPIPSRESTSATPFDPVQFRILLQQRLLELHKERMGMSGAPIPYPPYFAAAAILGRSLAGIPGAAAAAGAAAAAAAVGAATGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQELDLELEGGSGHNLSDNESEMEGGQEEDKTTSDYEKALHKSALAAAAAYMSNAVRSSRRKPAAPQWVNPAGAVTNPSAVVAAVAAAAAAAAAADNERIINGVCVMQGSGSSSSVEPTDSGATNEEAEEHEHAQLEIDQRFMEPEVHIKQEEDDDEEEQPTATAENSGEENSELKLKVVNEEKLRMVRVRRLSSNGGGSSEEMPAPLAPPPSAGAATSSSSGAVESTSCSSSSTPAVTTAAAAASWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00605472;
90% Identity
iTF_00605472;
80% Identity
iTF_00605472;