Dsuz002516.1
Basic Information
- Insect
- Drosophila suzukii
- Gene Symbol
- pnr
- Assembly
- GCA_013340165.1
- Location
- WWNF01000001.1:5253817-5260721[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 3.1e+03 -2.3 0.1 7 25 41 59 39 59 0.75 2 2 8.5e-17 2.3e-13 49.3 2.5 1 35 675 708 675 709 0.98
Sequence Information
- Coding Sequence
- ATGTATAATGTACCACATAAGTTTCGTCAAGTTTGTCGATTGTGCCTCACATTGGTTAACGAGTGCGATGTTGCAGAACTACAAATTTACGATGTTTCGTCGCATAATAGTGCTCAAGACAGGAATACGGCCGATTTCCGCAGAGACGAGAAGCGTGCCAACTGCTATTGCAGTGCTTTGAGCCACAATCTGTGCAGCTGCATCGGTGATAACTCGCTATCAGTATCCGCAGTGACCAATAATGAAACGGGAACGGGTCCAAGCCAACTCCAACCCAAGTCGCAGTCCCAAATGCAAACCCTTCACCTTCACCAAAACCAAACGACAACCCATTACACGCCAAGTGTGCCTTCTGCTGCGGACACAAAATCGAGTGAACGCGAACGCCAATTGGAGTCGGACATCGCCGAAAGATCAGTATTCAAAAGTCTGTCATCGTCGACCCACGAACAGCATATAGCACGCGGGGAGGTCCGGTCCCATACCCATTCCCAATCAAAATCGGAACTCCCGCGGGAGGAGCGTAATCATAAtcagcaccagcaccagcatcagcatcagcgcGAGGAGACAAGTGTGGATGTagatataacaaaaataagcGGAACCGATAACTACGGCAAAGAGCACGGCAGAGATGATTCATCACCACATCTTACATTTCAGATATTCAACTGTCTCTCTATTAAGGCACTGCCTAACGATGGATTACCCAACGTGATTTGTGGTGATTGCAGACAAAAATTGGATTCTTTCGAAAAGTTTCGTACCATGGCGCACAACTCACAAATAGCTTtgcaagaatttttaaatatatcaaaacatTTGAAACTAGACTCAAATGATTTGGAAATTAAGCTTGATGCAATTTTAAAGGCTTCATCAGAGGCTATAGCGGCAAAGGCTCTGACGGAGCTAAGCACGTTTTCTAAAGTTAAGTACGAACACAGTAAAATAGATTCCACCATCCAGCATGGCTTGGATAGGAAAATGGAGATTAGCAATCAAGATATGCCAGCACATAGCTTATATCCAAGtttattcaaatcaattaaTATGAAAAGCGATCAAAAGAAGGTAATGTCTGGATCCTCACATAGCCAGTTTGAATCAAAGCTGCAAAAGGACTCGGAAACCGAGAAATATGAaaatctgcagcagcagctagAAACGGCTGCCGTTCTAATGGATAtaagcaaaaaaattgtaatttccCCTCCATGCTCGAATCCCCAATCTCCGTGTTTCTCTGCAGCTGTAGATACAAGTATTAAAAGTTCTGTGATAAAATCAAAACGTCCATTAAACCAAAATGAAATTCAGGACGGAGTTGAAATTGACTTATCcgtcaaaaaacaaaagaacgATTACTCTAATCAACGGAACTCGGCCCCAATACACCATTTTTGCCAAACTCCAATGCTTGATATTCAGTCACACTTAAGAAGTGAAGAGGATTTTCAAAACTACAGTATTACCATTAACCAAGTTGGTGGGTCCGACTACAAATCAAAGGCACCGAAAGCCAGTACCGGCTCCTTACTAGACTCTGGCGACAGCTCCGACTCTCACAAACTGGAGATGGACATCGCGTCGTCAATTAATGATAGAAAGACCCCGGATAGTCTAAGCTCGGATCACGCAACGGATGCGGCAACTACTCAACTCTGGCAAGCTCTGGCCCGATCAGCCGCTAAAAGCAAAGAGGAAAATCAGGCAACACAAATAATCCGGAGCATGATGAGTCAGTCTTTCGTGTTTCCGGCTCCGTCGACAGTATCATTTACAAAAGTACCTGAAGAACCCATAGCACTATTAAAGGATCTATCAGAGGCTCAATCCAGCAAATCAAAACCCTGTAGAAGAAAACAAAGTTTTCCTACCAAAACTGATTGCATCGATGTAGTTAATGAGAATGTGACTGATACTTATACCACTTCAGAAGCAGCTCCAGAGGAAAAGAAAGATAAAAGGAACATTAACCTTTTTAATGCCATACCTGGTGCTCAAAAAGATATGTCATGTTCCAACTGCGGCACCCTCACTACTACAATCTGGAGACGAAGTGTTCGAGGAGAAATGGTTTGCAACGCGTGCGGGTTGTATTTCAAGTTGCACGGGGTCAACAGGCCGCATTCAATGAGACGCGATACCATACACACCAGACGCAGGCGTCCTAAAGAATTGGAGCGATCTAAAAAAAAACACAAGCAAATGTCATCATGTTCTTCAATGGAACCAGCGAAACCAGATTTCTTGACGTCTAGGGAACACCTTGATATTTCTGGGTTGGTTTTAAATaaatacaaaaaggaaatcgaCGAATCCGACACCGCAGCAGcacttaaagatattttattaagGCGGAAGAAGTCAAATTCTTTGCCGGCGTTTAATGATACCTGTGAAAGTGCGGATCATTCCGCACCGCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATAA
- Protein Sequence
- MYNVPHKFRQVCRLCLTLVNECDVAELQIYDVSSHNSAQDRNTADFRRDEKRANCYCSALSHNLCSCIGDNSLSVSAVTNNETGTGPSQLQPKSQSQMQTLHLHQNQTTTHYTPSVPSAADTKSSERERQLESDIAERSVFKSLSSSTHEQHIARGEVRSHTHSQSKSELPREERNHNQHQHQHQHQREETSVDVDITKISGTDNYGKEHGRDDSSPHLTFQIFNCLSIKALPNDGLPNVICGDCRQKLDSFEKFRTMAHNSQIALQEFLNISKHLKLDSNDLEIKLDAILKASSEAIAAKALTELSTFSKVKYEHSKIDSTIQHGLDRKMEISNQDMPAHSLYPSLFKSINMKSDQKKVMSGSSHSQFESKLQKDSETEKYENLQQQLETAAVLMDISKKIVISPPCSNPQSPCFSAAVDTSIKSSVIKSKRPLNQNEIQDGVEIDLSVKKQKNDYSNQRNSAPIHHFCQTPMLDIQSHLRSEEDFQNYSITINQVGGSDYKSKAPKASTGSLLDSGDSSDSHKLEMDIASSINDRKTPDSLSSDHATDAATTQLWQALARSAAKSKEENQATQIIRSMMSQSFVFPAPSTVSFTKVPEEPIALLKDLSEAQSSKSKPCRRKQSFPTKTDCIDVVNENVTDTYTTSEAAPEEKKDKRNINLFNAIPGAQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKELERSKKKHKQMSSCSSMEPAKPDFLTSREHLDISGLVLNKYKKEIDESDTAAALKDILLRRKKSNSLPAFNDTCESADHSAPLNLVSSENNAKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00505773;
- 90% Identity
- iTF_00603003;
- 80% Identity
- -