Basic Information

Insect: Drosophila suzukii
Gene Symbol: jing
Assembly: GCA_013340165.1
Location: WWNF01000003.1:7829168-7841770[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00072 0.049 14.0 2.0 1 23 716 738 716 738 0.98

2 8 0.00012 0.0083 16.4 1.4 1 23 770 792 770 792 0.97

3 8 0.088 5.9 7.4 0.5 1 19 800 817 800 823 0.81

4 8 0.0023 0.15 12.4 0.0 3 23 830 851 829 851 0.96

5 8 0.00023 0.016 15.5 3.5 1 23 857 879 857 879 0.97

6 8 0.033 2.2 8.7 0.2 1 23 886 909 886 909 0.95

7 8 0.0003 0.02 15.2 2.2 2 20 916 934 915 937 0.91

8 8 0.061 4.1 7.9 8.7 1 23 943 966 943 966 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00072	0.049	14.0	2.0	1	23	716	738	716	738	0.98
2	8	0.00012	0.0083	16.4	1.4	1	23	770	792	770	792	0.97
3	8	0.088	5.9	7.4	0.5	1	19	800	817	800	823	0.81
4	8	0.0023	0.15	12.4	0.0	3	23	830	851	829	851	0.96
5	8	0.00023	0.016	15.5	3.5	1	23	857	879	857	879	0.97
6	8	0.033	2.2	8.7	0.2	1	23	886	909	886	909	0.95
7	8	0.0003	0.02	15.2	2.2	2	20	916	934	915	937	0.91
8	8	0.061	4.1	7.9	8.7	1	23	943	966	943	966	0.96

Sequence Information

Coding Sequence: atgGATAACAAAACTACACAGttggattttaaattactggTGGATCAATCACTAAATCTACTGGACAGCCTCAACACAGCATTGCGGTGCGATGCTATTCAATTCTTGCTGCAGACGCTTAAGTGCAAGTACCCGGAGGCCTGCGACCAAGTCGTCAGGAATCTGTTCAGTCACGTAGCTGTAGCCAACGACAATGGAGGGGCGCAGCAGCAGGAGCTAGCGAGGACGAAGCAGCTCCAGCTGCTGCTCACCGCCAAGAAGGAGAAGAAGGAGCCTGGAACCGGCTGCGAGGCGGAGATCAAGCGCGAGAACGACGAGGAGGAGTCGGGATCGACGGATCTGAACCAGAACTTCGAGAAGATCCTCTGCAAAGAGGAGTTCCTGTGcctcgaggaggaggacgaggactTTCTCGACGATGCGGACACGCAGAACTCGTCTTCCCTGCAGTTCCATGCCGGCAACAATGTGGACGCCCTGGCCATGGGCCCCGGCGATCCACTGGACCTGATCCAGACCGGCGTTTCGCTGCTGGTCAAGCGGAAGTATGCGGCTACCTTTGAGGACGAGGAGCAGCTGGGCGAGGACGAGGaggccaacagcaacagcagcgacGGGAAGCTGGTCAAGCGGAAGCGCACCAACAACATGCACCTGACCGTGACGAGTGTGCGGCGGAAAGAGGAGCACAGCCGGCTGGGCGAGGGCTATGTCTTCCACGAGGACAGCCAGTACACGATGCGGTATCACCACAGCACCGGTGAGTTCAGCGAGCGGGCCTTCAAGGCCCAGTTCCGGGCTCTGCTCCGGATGGCGCTCAGCCAGCACCACAAGCCCTTCCTCCGGCAGTTCTACGAGAACTTCGTTGTGAACGGACGCCTGCTGGGCACCACGCCCTCGGCGCGGGTCCTGAAGGAGATACGTGAGCAGCGGCTGGAGGAGTGGCGACGTCATCGGGAACGCCGCCAGTTGGTCATCCTGATGAAGCAAAACGAGCTGCAGCAAGATGAGGAgattcagcagcagcagcaggaggaagAGCAGAATCAGGAGGAGAtccagcggcagcagcagcagcgcctGGAGGAGATTCAactgcaggagcagcagcagcaacacatgGAGGAGAttcagcggcagcagcaactgccGGCCATCTCGTTTGGTGACTCCGAACTGGAGTCGGAAACGGAATCGCAGCTGTCGTCGGCTGCCCAAGAGATTATGAAGTTCGAGGAGTTCATTGACGAGGGTGTAGGCGCTGGTCGTCTGATCGATGGTCTGGAGATGGAGCCCGAGATCGATGACATGCTAGCTGGCGCCGGCAGTGCCTTGGGCAGTGTGAACAGCGCCAGCggacacagcagcaacagtagCAGCAGCGGGAGTGGGAGCGGCGGTAATGGGAATGGCATCAGCGGGGTGATCCTGGAGAACAATAGTCATCATTCGCATCACCTaagtagcagcagcagcgcaaATCTTGTGATCAACGGCCTTACGTCAAGCAATAGCATcagcaacaataataataataacaacaataatgtCAGTCTACACCGCCCGCAACTGACGCCGCAGGCGCCCATGCCCATGTCCATGCCCATGGAGAACAGGGATCTTAAAGCCGTGCAGGCGGTTCATGGCAATGCCAATGTCATCTTGCCGGGCGGCAGTTCTGGCCTCGCCAACCAGATTCAGCTGCATCAGCAGCAAAAGCACTTCAACTCAAGCAATAATCCGCTGTCGATGATGGGTGGCatgatgcagcagcagcaacagcagcatgTGGGCATGCCGCACCAGCAGCgtcagatgatgatgatgccggAGGATTTCCCACAACACGGAGCCTCGATGATGGCCAGTCGACAAATGCCGGCGCTGGCTGCCTTGTCGAATCTGGGCGATCCTCCTGCTGGGCAGCTAAACTCATCCCTGGAACTGGACGACAATGATCTTTCGCCGGATGAGGATGACGACGACTTGGACCACGACATGGATGAAATGGATGCGGCCAAGCAGCAGCTAATCGATGGcggcagcagtagcagcaccTCGCTGCAGGCGCCGCCATCGCAACATGGCAGCGGAAGTGGAGGCAGTGGAGGGCAGACGCCGGGCAGCAAAAAGGACAAACCCAGCTACAACTGTCTGCTCTGTCCCAAGTCGTATCGCAAGCGCAAATCCCTGCTGGACCACTACAAGATGCATCCGGGCTACTGCCACGACTGCGGTCAGCGCAACGGGAACACGCTGGAGGAAATCATCCATCACAACCGAACCATGCATGTGAAGGAGTTCCCATTTGTGTGCGAGACGTGCGGGGAGTCGTACTCACGCAAGCAGCAGTTCCATGCCCACGTGGAGTCGCACAACAAGAAGGAAATCAAAACCTTTCCCTGCGGTGAGTGCGGCCAGAAGTTTCCGCAGAAGAAACTGCAGCAACACTTCGAGGAGACGGGCCACAAGGCCGACGGGGCCATCTGCGAGGTGTGTGGCGAGGAGTTTCAGTCGAAGAACGCCCTCTACCAGCACATCATTCGCGTGCACAAGCGCGACAACTTTTTCGAGTGCCACATTTGCCATAACCGCTTCACGCTGAAGGCCAACCTGGAGCGGCACGTGCAGCTGCACACCGAGATCAAGCGGCCCTACGTGTGCGATCTGTGCGGCTCGTCCTACTTCACATATCCCGCGCTCAAGGAGCACTACAGCAATGCCCACGTGGACGTGTCCGAGTGCAAGTGCACGTTGTGCGGCAAGCGCTTCGGATCGGCAAAGTCGCTGCAGCGGCACCTGCCGTCGCACTCGGAGGAGAGGCCGCACTGCTGCAACTATTGCGATCAGACCTTCAAGTGGAAAACGCACCTGGTGCGTCACAAGCAGACCATGCACGGCAACGAGCCGCCGCCTCCTAAGAAGGGAAAGCAGCGCTTTCCCAAAGCGAACGAAGAAGCAGAAATGGCTAGCTTACCGGATATGCCCGGTCCACCGCCTGTCAAGGCCAGTAAAAAGGCAGTGACCAGCAAGGCGAAAGCTCAGGCAGCAGCCGCCGcggccgcagcagcagcagcatcctcccagcaacaacagcagaagGGCTCTGCGGCCACGCcgacgccgccgccgccggtCTCCACCACGCCGGGTTGCCTGCAGCAGGATCAATTCAATGCGGCCATggtcagcagcaacagttcgCAATCCTCCACGGCCTCCACGTCGCAGCACTCGGTGTCGACGAGTGAATCTCAGCAGAATTCCATGTACAATCAGAGCTTTAATGCGGAGAAGCAGCAGCCGggaccgcagcagcagcagccacagaaTGCCTTGCATCAGCAGCATCCAACACCGCCGCCGgcaccacaacaacagcagcaacagccgccgccaccgcctcAGTCCCGAGTTGCACCCGGAGATTTGCATTTGCAGCGTATGAATAGCTTTGGGCAGGATGGACAATTTCACTTTGAGTCCAATCCGGCAGCTGGCGCCTATCAGCAGCATCAACTGATCAGCCAgtaccagcaacaacaacaacaacagcagcagcaacagcaacaacagcaacagccgcagcagcagcagcaaccacaacaTCATctcgcccagcagcagcagcacatgAGGAGTCACACGCCACAGAGTCCACATCCTCCGCACACTCcgcaactgcaacaacagcagccgcagcagcactTCAGCTCCCCGCACCACATGCCGCCGATGCACCATCAGCACCAGTTGAtgatgcagcagcaacatcgccaCAACCAGCGCTCGCCGCTCCACCATCATCCTGCAGCCCAGCAAttgcaacagcagcatcagcaaccATCGCATTCCCCACAGCATGCGAGACTGCAGTCGCCTCAACCTGCTTCagtacaacaacaacagcagcagcagcaacaacaacaacaattctTGCAGCAACAGGCCACCGATTCCTGGGGCAACATGAACTTTGGCAATCCTCCCAGCAACCAGCAGGTTGAGCTCAAAGATAACAAATTCTATATTGTGGAATCGGCCGAGTTCCTAGGGCTTCCAATGAATGTGCCGCCTtcaccacaacaacagcagcagcaacaagcaGTCAGCAagccccagcagcagcagcaacaacacccACAACCGCAGCAACCGGATCCAACCCTCGCTGGTGATCTGATGGGCTTTCAGCACATGTGGCCGGCGCCCGCGTTCCCTCAATCTacacagcagcaaccacaacagcaacaacaggcggcgcagcaacaacagcagcagcaacaggccCAAGGACAGGCGAACTCAAGTGATCCACACAACTACAACAATATCGGCAGCATACTCACGAATCTCATTGACACAAACCCCGCGCCAATGGAGTACAATTTCGACCtgatgcagcagcaacaaacgCCATcatcccagcagcagcagcagcaacagcaggcggcgcagcagcaacatcacggTGCCGGAGGCTATGCGAGCGCTTTAATGCGCAGCGGAGGCGGCGTTTACGGAGGAGCCTACGAGCAGCACTTGAGCGAGCAACTGGTCAGCgagcagcagaagcagaacAGCTTTCAGCCCTACCACCCACATCCGCATGGCCTGCAggctcagcagcagcagccattGCATCCGCATCTGTTGCCTCCGCCAGCGCCGCACAGCAATGTCTACGACCGCACGGGAGTTGGAGTCGGCGTGGGCGTAGGTGTAGGCGTGGGCGTGGGATATCCCATGCTCGGAGACGATACGAAGGGCGTGCTGCCGCCCATGATGGGTGGAATGATGCAGCAAATGCCGCCGCATGGCCAGCAACCGGATCTAATCTACTACCCAGTGAAGAACGATTGA
Protein Sequence: MDNKTTQLDFKLLVDQSLNLLDSLNTALRCDAIQFLLQTLKCKYPEACDQVVRNLFSHVAVANDNGGAQQQELARTKQLQLLLTAKKEKKEPGTGCEAEIKRENDEEESGSTDLNQNFEKILCKEEFLCLEEEDEDFLDDADTQNSSSLQFHAGNNVDALAMGPGDPLDLIQTGVSLLVKRKYAATFEDEEQLGEDEEANSNSSDGKLVKRKRTNNMHLTVTSVRRKEEHSRLGEGYVFHEDSQYTMRYHHSTGEFSERAFKAQFRALLRMALSQHHKPFLRQFYENFVVNGRLLGTTPSARVLKEIREQRLEEWRRHRERRQLVILMKQNELQQDEEIQQQQQEEEQNQEEIQRQQQQRLEEIQLQEQQQQHMEEIQRQQQLPAISFGDSELESETESQLSSAAQEIMKFEEFIDEGVGAGRLIDGLEMEPEIDDMLAGAGSALGSVNSASGHSSNSSSSGSGSGGNGNGISGVILENNSHHSHHLSSSSSANLVINGLTSSNSISNNNNNNNNNVSLHRPQLTPQAPMPMSMPMENRDLKAVQAVHGNANVILPGGSSGLANQIQLHQQQKHFNSSNNPLSMMGGMMQQQQQQHVGMPHQQRQMMMMPEDFPQHGASMMASRQMPALAALSNLGDPPAGQLNSSLELDDNDLSPDEDDDDLDHDMDEMDAAKQQLIDGGSSSSTSLQAPPSQHGSGSGGSGGQTPGSKKDKPSYNCLLCPKSYRKRKSLLDHYKMHPGYCHDCGQRNGNTLEEIIHHNRTMHVKEFPFVCETCGESYSRKQQFHAHVESHNKKEIKTFPCGECGQKFPQKKLQQHFEETGHKADGAICEVCGEEFQSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEIKRPYVCDLCGSSYFTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFKWKTHLVRHKQTMHGNEPPPPKKGKQRFPKANEEAEMASLPDMPGPPPVKASKKAVTSKAKAQAAAAAAAAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQDQFNAAMVSSNSSQSSTASTSQHSVSTSESQQNSMYNQSFNAEKQQPGPQQQQPQNALHQQHPTPPPAPQQQQQQPPPPPQSRVAPGDLHLQRMNSFGQDGQFHFESNPAAGAYQQHQLISQYQQQQQQQQQQQQQQQQPQQQQQPQHHLAQQQQHMRSHTPQSPHPPHTPQLQQQQPQQHFSSPHHMPPMHHQHQLMMQQQHRHNQRSPLHHHPAAQQLQQQHQQPSHSPQHARLQSPQPASVQQQQQQQQQQQQFLQQQATDSWGNMNFGNPPSNQQVELKDNKFYIVESAEFLGLPMNVPPSPQQQQQQQAVSKPQQQQQQHPQPQQPDPTLAGDLMGFQHMWPAPAFPQSTQQQPQQQQQAAQQQQQQQQAQGQANSSDPHNYNNIGSILTNLIDTNPAPMEYNFDLMQQQQTPSSQQQQQQQQAAQQQHHGAGGYASALMRSGGGVYGGAYEQHLSEQLVSEQQKQNSFQPYHPHPHGLQAQQQQPLHPHLLPPPAPHSNVYDRTGVGVGVGVGVGVGVGYPMLGDDTKGVLPPMMGGMMQQMPPHGQQPDLIYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00594826;
90% Identity: iTF_00602927;
80% Identity: -