Dsuz007619.1
Basic Information
- Insect
- Drosophila suzukii
- Gene Symbol
- kn
- Assembly
- GCA_013340165.1
- Location
- WWNF01000003.1:9224533-9253510[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-234 1.7e-230 766.1 0.0 39 385 58 433 39 436 0.98 2 2 6e-08 0.00097 17.4 15.1 422 520 436 534 433 549 0.67
Sequence Information
- Coding Sequence
- ATGGAGTGGGGCCGGAAGCTGTACCCCAGTGCCGTTTCCGGTCCGCGATCCGCCGGCGGCCTGATGTTCGGCCTGCCCCCCACCGCTGCCGTGGACATGAACCAGCCGCGCGGACCGATGACCTCGCTGAAGGAGGAGCCGCTGGGCAGTCGGTGGGCCATGCAGCCAGTCGTCGACCAGAGCAATTTGGGCATCGGTCGCGCCCATTTCGAAAAGCAGCCGCCCAGCAATTTGCGCAAGTCGAACTTCTTCCACTTTGTGATCGCCTTATACGATCGAGCCGGCCAGCCCATCGAAATCGAACGGACGGCCTTCATAGGGTTCATCGAGAAGGACTCGGAATCGGATGCCACCAAGACGAACAATGGCATTCAGTACCGGCTGCAGTTGCTCTATGCTAATGgagCTCGCCAGGAACAGGACATATTCGTGCGCCTCATCGATTCGGTGACCAAGCAGGCCATCATATATGAGGGTCAGGACAAGAATCCCGAAATGTGTAGAGTGCTCCTAACGCACGAGGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGCTTCTTCCTAAAGTTCTTCTTGAAGTGTAATCAAAACTGTCTGAAAAATGCCGGCAACCCGCGGGACATGCGCCGATTTCAGGTGGTAATTTCCACGCAGGTGGCCGTGGATGGACCACTTTTGGCCATCTCCGACAACATGTTCGTGCACAACAACTCGAAGCACGGACGGAGGGCCAAGCGGCTGGACACCACGGAAGGTACAGGCAACCAATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCACCACTGCCCGTGGCCACGCCCTGCATAAAGGCGATCTCGCCCAGCGAGGGCTGGACAACTGGTGGCGCCACCGTGATCATCGTGGGCGACAACTTCTTCGATGGCCTGCAGGTGGTTTTCGGCACCATGCTGGTCTGGAGCGAGCTGATCACCTCGCATGCGATCCGGGTCCAGACCCCACCGAGACACATTCCCGGCGTGGTGGAGGTGACGCTATCCTACAAGAGCAAACAGTTCTGCAAGGGATCGCCCGGTCGCTTCGTCTATGTCTCAGCTCTCAACGAACCCACAATCGACTACGGTTTCCAGCGCCTGCAGAAGCTCATTCCCCGGCATCCTGGCGATCCCGAGAAGCTGCAAAAGGAGATAATCCTCAAGCGAGCTGCCGACTTGGTCGAGGCGTTGTATTCCATGCCCAGATCCCCGGGCGGATCGACGGGCTTCAACTCGTACGCCGGTCAACTGGCGGTCAGTGTGCAGGATGGTTCCGGCCAGTGGACCGAGGATGATTACCAGCGGGCCCAGTCCAGCAGCGTGAGTCCACGTGGCGGCTACTGCAGCAGCGCCTCCACGCCCCACAGCTCGGGAGGATCCTATGGAACCACGGCGGCCAGCGCAGCGGTGGCGGCCACGGCAAATGGCTACGCACCTGCTCCCAACATGGGCACACTCACCTCCTCGCCCGGCAGCGTCTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCACCACCACGCGGCAACGGCCCACCCGCACCACCATTACCCACATCCCCACCAGCCGTGGCACAATCCAGCCGTATCAGCAGCCACGGCGGCGGCCGTTTAA
- Protein Sequence
- MEWGRKLYPSAVSGPRSAGGLMFGLPPTAAVDMNQPRGPMTSLKEEPLGSRWAMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNQSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTTAASAAVAATANGYAPAPNMGTLTSSPGSVFNSTSMSAVSSTWHQAFVQHHHAATAHPHHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -