Dsuc001579.1
Basic Information
- Insect
- Drosophila sucinea
- Gene Symbol
- srp
- Assembly
- GCA_018150745.1
- Location
- JAECWP010000114.1:10333484-10342827[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-19 7.5e-16 57.5 3.1 1 35 708 741 708 742 0.97
Sequence Information
- Coding Sequence
- ATGACGAAGACGGGTAAACCAAATAAGGAAAAGACTGTGGGAGTGTCATCGTCCAGAGATTTATTGACCAATGCAGCAAATATGAAAATGAACAAGGCTCTGGCCAATGCCAAGACGCAGCAGCAGGCCAAAAAAGGACGTTCAACAACAACTATTACAACAGCAATATATGCATCGGTGCCTCTAACAGGATCAAATATCGAAGGCAGCAGTGACGAGAAAGAGATGGCAACAGAGGTAGGTGCCGAGTCCGAAACCGAGGCTGAGACAGCGGCTGCGACGTTGACGCCGCAGTCAGCGCTTGCCACAGCGAATTTATCGTCATTAGAGTCCGCGCACTTGCAGGCTCACGCTTCAGTTGTCAGCGAAGCACCAAAGCAAACGGTTACCACGATCGCGTCAGTGTCACCAAACGAATCGACAGTAATAACAACGGCAGCAACTTCATCTGCAGCAACAATTGTCAGTGCATCTACTGCACTAATTGCTACTGCGGCAGCAGTAAATGTGAATGTGATAAATAATAATCAACAACAAGGAGAACAACATCAACAATTAAGTGAGAACGCTAGTGAAAGTGTTGATAACAAAATCAAAGTGATCAACTATGCACATCACCAACTGACACAGGAACAACAAATCTATGAACAGCAATTTCTGGATCAGCAAATCCTAAACAAGCAACAGCAATACACTAGTTGGTTGACGGCTTATGATTTGACCAGCAATTCTTCGACAACAGCAGACAAAACTGAGTTTTACGCCTTGACACCGCAGCACTATCTGGCCCATTTGCCTTATCATACCCACCCGCACAGCCATCCCCAACATTACGATCCTCACCAAAATCTCAATAGCGTCGGCAGCACGGATTCAATGCGTAACAATTTCGCTTTATATAGTGTATATGGAAGCGGTGGAGATGAGTGCTTTGAAGATGCACACAGTGCCAGCTTTCATATGCTGACACCCGTCTCCGACCTACAAAATCTGAAAGACCCGAATTCAGCTTTATACGCTCTTACACACGAGCAACTTTTGCAGCAACATCACCATCAACTGCATCTTCAACACCATCAGCCGCATCAACATCAGATCAACAGTAATAATAACAACAATTCTACCAGTTCTGTCGGCGGCGATTCCCCCTCACCTACAAATGCGCTCTCCACTCTTCAAAATTTCACCCAGTTAAATGGTGCAGGACATCCACGGGAAAGTTATGGCAGCATTTCTCCGGAGCACAGCAGCTATTTCACGACACCGCTAAGTCCTGTTTTGCAAACCAGCTCTGTCTATACGGGGCCTCTGCTCACCTCAACTGCAAATGGAATGCAGTATGGTATGCCCTCTCCGACCCACAGCCATGTACATCTCCATCAGCAACCTCATCAACACCAACACACTTCCACGAGCAACAGTCCTGGCCCTGGTTCTGGTCCACTGGCTACACTTCACGCCAGTTCTTCTCCCAACAACAATCTCGTGAATCTCCACCACCAACCTCATCAACTTCAGCCACAGGACCAGCCACACAATCCCTCTAGCACCAGTCCTTGCCCTGGTTCTGGTCCACCGGGTGGTGGTAGTGGGGGTGGTGGAGGTGCTCTGCCTGCTTACGCTTCATTAGCAAATTACCGCGGACATAACGACGCTTGGGCCAATCATTACGAACCAATTAGTTATGCATCCTCCAATGCATCCGGTCAGACACAGTCGTCGCATCTAGGGGCCGGAGTTATACGCAATGGACGGGCTATAAGTGCGGCAAATACCGCAGCAGCCGTCGCTGCAAACGATGTAGGAGCCCCAAGTGGTGTCGGACTAGATCCGACACGTTACCTAACTGCTTCGGCATCGCTAACAGCATCATTTTTCGATGCCGATTTGTTCACTGAGGGGCGAGAATGTGTCAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGAACTACACTTTTAATGTGAGTAAGGCCTCCACAAATGCCATCAGCACCAGCTCAACGTCAGCGCCAGCGGCGGCGGCGGCGGCAACAACATGTACCACAACGCTCGATGAGCAAGTTAGTCGCGCCAATTCGAGACGCTTGAACGCATCCAGGCGGGCTGGGCTCTCTTGCTCCAACTGTTTGACTACCCACACATCTCTATGGCGGCGTAATCCCAGCGGTGAACCTGTATGTAATGCCTGTGGACTTTATTTTAAATTACACAATGTTGCGCGGCCGTTAACCATGAAAAAGGACACAATACAGAAACGGAAAAGAAAACCTAAGGGTACTAAGAGTGAGAAATCAAAGAAAAAAACCATTGTATCTCCCAGCAGCATGGATACATCTAGTAATAATAATCCATCCTGCCACAATGCTAATCTTCCTGTGGAGGGCCAAATAATGGGTGAGGTCCCTGATGTGGGAGCAGCAGCTATCAGCAACACAATCAAATCCGAGCCATCAGCTGCCACATTATCGATAGCAGCAACGGCATCGCCAACACTGACAACGGGATCGACTCTGAGTCACAATCCCAACAACAACCATAATCACAACAGCAACATTATTAGCTTGCAAAATCCCTACCACCAACTAGGACTTGGTCAGGGAGCAATGCCATTGTGTAAGCCAGGACGTGTCGTCTCTTCTCCCTACTATTTGGCTGAAGAGGAGCAAGGTCAGCAGCAACAGATTAAACTGGAGCAGCAACAACATGTTGAGGAACTCTTGCTCAATCGCTCCATCTCCATGGACGAGCAGTATGAATTGGCTGCATATCAGCACCAACAACATCAGCAACAACAGCAACAACTAGCCGTTGCCAGCTATGCGATGCATGCGGCTGCTCAGCAACAACTGCATGAGTTTGAACGCAAATTTGGTATTGATCGTGAGACTGTTGTTAAAATGGAGTAA
- Protein Sequence
- MTKTGKPNKEKTVGVSSSRDLLTNAANMKMNKALANAKTQQQAKKGRSTTTITTAIYASVPLTGSNIEGSSDEKEMATEVGAESETEAETAAATLTPQSALATANLSSLESAHLQAHASVVSEAPKQTVTTIASVSPNESTVITTAATSSAATIVSASTALIATAAAVNVNVINNNQQQGEQHQQLSENASESVDNKIKVINYAHHQLTQEQQIYEQQFLDQQILNKQQQYTSWLTAYDLTSNSSTTADKTEFYALTPQHYLAHLPYHTHPHSHPQHYDPHQNLNSVGSTDSMRNNFALYSVYGSGGDECFEDAHSASFHMLTPVSDLQNLKDPNSALYALTHEQLLQQHHHQLHLQHHQPHQHQINSNNNNNSTSSVGGDSPSPTNALSTLQNFTQLNGAGHPRESYGSISPEHSSYFTTPLSPVLQTSSVYTGPLLTSTANGMQYGMPSPTHSHVHLHQQPHQHQHTSTSNSPGPGSGPLATLHASSSPNNNLVNLHHQPHQLQPQDQPHNPSSTSPCPGSGPPGGGSGGGGGALPAYASLANYRGHNDAWANHYEPISYASSNASGQTQSSHLGAGVIRNGRAISAANTAAAVAANDVGAPSGVGLDPTRYLTASASLTASFFDADLFTEGRECVNCVAAESGGDFYKNYTFNVSKASTNAISTSSTSAPAAAAAATTCTTTLDEQVSRANSRRLNASRRAGLSCSNCLTTHTSLWRRNPSGEPVCNACGLYFKLHNVARPLTMKKDTIQKRKRKPKGTKSEKSKKKTIVSPSSMDTSSNNNPSCHNANLPVEGQIMGEVPDVGAAAISNTIKSEPSAATLSIAATASPTLTTGSTLSHNPNNNHNHNSNIISLQNPYHQLGLGQGAMPLCKPGRVVSSPYYLAEEEQGQQQQIKLEQQQHVEELLLNRSISMDEQYELAAYQHQQHQQQQQQLAVASYAMHAAAQQQLHEFERKFGIDRETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555499;
- 90% Identity
- -
- 80% Identity
- -