Basic Information

Insect: Drosophila sucinea
Gene Symbol: -
Assembly: GCA_018150745.1
Location: JAECWP010000138.1:2139006-2140388[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.1 2e+03 -1.1 0.1 7 23 23 37 22 39 0.75

2 7 2.4e-07 0.00023 21.1 0.8 10 44 175 206 171 206 0.92

3 7 3.5e-05 0.033 14.2 2.3 11 43 214 243 211 244 0.87

4 7 1.4 1.3e+03 -0.5 0.1 16 28 262 274 255 287 0.79

5 7 0.69 6.6e+02 0.5 0.7 17 37 289 306 280 313 0.78

6 7 3 2.8e+03 -1.6 1.4 8 26 309 328 302 341 0.64

7 7 0.26 2.5e+02 1.8 0.0 19 40 377 395 374 398 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.1	2e+03	-1.1	0.1	7	23	23	37	22	39	0.75
2	7	2.4e-07	0.00023	21.1	0.8	10	44	175	206	171	206	0.92
3	7	3.5e-05	0.033	14.2	2.3	11	43	214	243	211	244	0.87
4	7	1.4	1.3e+03	-0.5	0.1	16	28	262	274	255	287	0.79
5	7	0.69	6.6e+02	0.5	0.7	17	37	289	306	280	313	0.78
6	7	3	2.8e+03	-1.6	1.4	8	26	309	328	302	341	0.64
7	7	0.26	2.5e+02	1.8	0.0	19	40	377	395	374	398	0.76

Sequence Information

Coding Sequence: ATGTTAAAGTCCCTCAAGCCGGACACATTCGCTGGCGTAGCCAACGCTAAATGCGGCGAAATCTTTTTTCAGAGCTTGAACAGCTTCCGGATCGACTGCGTCTTTTGTGATATGAAATGTTTTATATTTGACGATTTTCTCCTGCACATTCAGAATATACATTTTGCCAATGGACTGCTTAAAACAGAGACGATGCGGAATCTTCAGCAGAGGGAAACCAAGAAAGAGGCGTCAGCTTCACCTGCAACAGAGCCCGTGCCCATTGTGGCTCAAGTGAATCCATTTGCTTGGTATGAAAACGAGAAGGATGAAGAACTTGATGACGATGATAATGATAATGTGGCTGACGAACAATCATCAGATGAACAGTCAACAGAAGAGGGTGAAGTGAAAGCCATCATGAAGTGGAATCGTGATTATCCCACGGTTTCAATGCGTCAATTGCGAGCACTGAAGGTCGACTACAAGGAGGAGGAGGAGTCGGGCCAGGAAGAAGACGTCTCAGAGGCAGAAGAGAAACAGTTGACGGAGCAAGAGAAGGCCATCTCGTGTCCACATTGCGAGAAAATATATCAAAGTAAAACCACCTTAGATCGTCACATAGCCCGTCAACATAAAGCGCTAAGGGATTCCCACGTTGAAATGATTAAATTGAAATTTAAATGTCAGCATTGTGATAAGATTTATAAGGGCAAATATTCTCTGCGTCAGCATGTTAAAAGAGATCATGACTTGAGCGTAGACGAAGAAGACTCAAAAGCCAGCACTACCACATCCTCATCACAATTTATCTGCCCGGAATGCCATAAGGAACTACCTCGCCTTCGTCTCCTCGATGAGCACATGTTCCAAATGCACGGTGGCGCCCTTTGTCCCATATGCCAACGTCGATATAAGACCCGTCATGAACTTAAACGCCATCAACTGAATCATACAAGCGAACGGAATGTGGTTTGCTCCTATTCCGGCTGTGAGAAGCGTTTTTTTAGCCGCCGGCACATGCGTAATCACATCAAAGTCCATTCGGAGCAAAAGAATTTTGTGTGTGAGAACTGTGGGTATAGTTGTCGCAATAAGGAAACTCTTCGCGTCCATATGCGTAGTCATACGGGTGAACGTCCGTTTGGCTGTCAACTATGCGGAAATGCCTATGCCCAGGCAGCTGGTCTAGCCGGACATATGCGTAAGCATCGGAACGATGAGCTTAATGGATAA
Protein Sequence: MLKSLKPDTFAGVANAKCGEIFFQSLNSFRIDCVFCDMKCFIFDDFLLHIQNIHFANGLLKTETMRNLQQRETKKEASASPATEPVPIVAQVNPFAWYENEKDEELDDDDNDNVADEQSSDEQSTEEGEVKAIMKWNRDYPTVSMRQLRALKVDYKEEEESGQEEDVSEAEEKQLTEQEKAISCPHCEKIYQSKTTLDRHIARQHKALRDSHVEMIKLKFKCQHCDKIYKGKYSLRQHVKRDHDLSVDEEDSKASTTTSSSQFICPECHKELPRLRLLDEHMFQMHGGALCPICQRRYKTRHELKRHQLNHTSERNVVCSYSGCEKRFFSRRHMRNHIKVHSEQKNFVCENCGYSCRNKETLRVHMRSHTGERPFGCQLCGNAYAQAAGLAGHMRKHRNDELNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00555235;
90% Identity: iTF_00555235;
80% Identity: iTF_00604329;